RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 SEPT12Q8IYM1 358 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 CCDC148Q8NFR7 591 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 TTC14Q96N46 770 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 CEP89Q96ST8 783 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 TMX1Q9H3N1 280 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 MST1RQ04912 1400 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 PIK3AP1Q6ZUJ8 805 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 MARCH10Q8NA82 808 aaPredicted RBP8.53□□□□□ -1.04
PHTF1-209ENST00000474926 GPR101Q96P66 508 aaPredicted RBP8.53□□□□□ -1.04
PHTF1-209ENST00000474926 FEZ1Q99689 392 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 RAB34Q9BZG1 259 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 ZNF202O95125 648 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 CALML3P27482 149 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 RFX5P48382 616 aaPredicted RBP8.53□□□□□ -1.04
PHTF1-209ENST00000474926 RILPL1Q5EBL4 403 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 RRAGBQ5VZM2 374 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 FANCBQ8NB91 859 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 VEZTQ9HBM0 779 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 CBX8Q9HC52 389 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 RBM28Q9NW13 759 aaKnown RBP8.53□□□□□ -1.04
PHTF1-209ENST00000474926 BTBD18B2RXH4 712 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 BMP15O95972 392 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 STAT6P42226 847 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 TCP10Q12799 353 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 NOLC1Q14978 699 aaKnown RBP eCLIP8.53□□□□□ -1.04
PHTF1-209ENST00000474926 RBM26Q5T8P6 1007 aaKnown RBP8.53□□□□□ -1.04
PHTF1-209ENST00000474926 OGFOD1Q8N543 542 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 CELF1Q92879 486 aaKnown RBP8.53□□□□□ -1.04
PHTF1-209ENST00000474926 CALML4Q96GE6 196 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 EYA3Q99504 573 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 DEF6Q9H4E7 631 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 GJB4Q9NTQ9 266 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 KCNH3Q9ULD8 1083 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 TAF6LQ9Y6J9 622 aa8.53□□□□□ -1.04
PHTF1-209ENST00000474926 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.53□□□□□ -1.04
PHTF1-209ENST00000474926 TNNI2P48788 182 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 DOK7Q18PE1 504 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 APOA5Q6Q788 366 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 FBXO18Q8NFZ0 1043 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 AIFM3Q96NN9 605 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 UBA5Q9GZZ9 404 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 IFT172Q9UG01 1749 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 POLR2DO15514 142 aaKnown RBP8.52□□□□□ -1.05
PHTF1-209ENST00000474926 SERPINB2P05120 415 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 SKILP12757 684 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 TBC1D9BQ66K14 1250 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 RRP36Q96EU6 259 aaKnown RBP8.52□□□□□ -1.05
PHTF1-209ENST00000474926 IFNKQ9P0W0 207 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 ZSWIM5Q9P217 1185 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 RIPOR2Q9Y4F9 1068 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 PARP1P09874 1014 aaKnown RBP8.52□□□□□ -1.05
PHTF1-209ENST00000474926 STRBPQ96SI9 672 aaKnown RBP8.52□□□□□ -1.05
PHTF1-209ENST00000474926 C6orf50Q9HD87 102 aa8.52□□□□□ -1.05
PHTF1-209ENST00000474926 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 LETM2Q2VYF4 491 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 NOM1Q5C9Z4 860 aaKnown RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 CAGE1Q8TC20 777 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 ZSCAN10Q96SZ4 725 aaPredicted RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 CLIC4Q9Y696 253 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 SHPRHQ149N8 1683 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 ELP1O95163 1332 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 FSD2A1L4K1 749 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 N4BP3O15049 544 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 RPS6KA4O75676 772 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 SCNN1DP51172 638 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 GSDMDP57764 484 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 ARHGAP29Q52LW3 1261 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 CCDC70Q6NSX1 233 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 CLEC4GQ6UXB4 293 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 C17orf53Q8N3J3 647 aaPredicted RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 STAMQ92783 540 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 CUL5Q93034 780 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 ZMYM6O95789 1325 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 CDHR2Q9BYE9 1310 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 KDM6AO15550 1401 aaPredicted RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 A0A087WWV3 80 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 NKX1-1Q15270 411 aaPredicted RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 NUP88Q99567 741 aaPredicted RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 ARGLU1Q9NWB6 273 aaPredicted RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 PCDHA7Q9UN72 937 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 TTF2Q9UNY4 1162 aaKnown RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 UTYO14607 1347 aa8.51□□□□□ -1.05
PHTF1-209ENST00000474926 USP42Q9H9J4 1324 aaKnown RBP8.51□□□□□ -1.05
PHTF1-209ENST00000474926 DIXDC1Q155Q3 683 aa8.5□□□□□ -1.05
PHTF1-209ENST00000474926 ENOX2Q16206 610 aaKnown RBP8.5□□□□□ -1.05
PHTF1-209ENST00000474926 UIMC1Q96RL1 719 aa8.5□□□□□ -1.05
PHTF1-209ENST00000474926 MINPP1Q9UNW1 487 aa8.5□□□□□ -1.05
PHTF1-209ENST00000474926 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.5□□□□□ -1.05
PHTF1-209ENST00000474926 COL15A1P39059 1388 aa8.5□□□□□ -1.05
PHTF1-209ENST00000474926 MED23Q9ULK4 1368 aa8.5□□□□□ -1.05
PHTF1-209ENST00000474926 UBR1Q8IWV7 1749 aa8.5□□□□□ -1.05
PHTF1-209ENST00000474926 URI1O94763 535 aaPredicted RBP8.5□□□□□ -1.05
PHTF1-209ENST00000474926 MTIF2P46199 727 aaKnown RBP8.5□□□□□ -1.05
PHTF1-209ENST00000474926 ITPK1Q13572 414 aa8.5□□□□□ -1.05
PHTF1-209ENST00000474926 DTHD1Q6ZMT9 781 aa8.5□□□□□ -1.05
PHTF1-209ENST00000474926 STOX1Q6ZVD7 989 aa8.5□□□□□ -1.05
PHTF1-209ENST00000474926 GOLGA6L1Q8N7Z2 621 aa8.5□□□□□ -1.05
PHTF1-209ENST00000474926 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms