RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 PTPRAP18433 802 aa19.38■□□□□ 0.69
SRRT-209ENST00000474896 FXR1P51114 621 aaKnown RBP eCLIP19.38■□□□□ 0.69
SRRT-209ENST00000474896 FASTKD5Q7L8L6 764 aaKnown RBP19.38■□□□□ 0.69
SRRT-209ENST00000474896 DZIP1Q86YF9 867 aaKnown RBP19.38■□□□□ 0.69
SRRT-209ENST00000474896 SCYL3Q8IZE3 742 aa19.38■□□□□ 0.69
SRRT-209ENST00000474896 BIN2Q9UBW5 565 aaPredicted RBP19.38■□□□□ 0.69
SRRT-209ENST00000474896 MYH2Q9UKX2 1941 aa19.38■□□□□ 0.69
SRRT-209ENST00000474896 ATRNL1Q5VV63 1379 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 GAKO14976 1311 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 DDTLA6NHG4 134 aaPredicted RBP19.37■□□□□ 0.69
SRRT-209ENST00000474896 ZBTB22O15209 634 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 CT47B1P0C2W7 299 aaPredicted RBP19.37■□□□□ 0.69
SRRT-209ENST00000474896 SLURP2P0DP57 97 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 FCGRTP55899 365 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 MAP3K10Q02779 954 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 RASGRF1Q13972 1273 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 SLF2Q8IX21 1173 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 SHISA4Q96DD7 197 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 FAM163AQ96GL9 167 aaPredicted RBP19.37■□□□□ 0.69
SRRT-209ENST00000474896 MEIS3Q99687 375 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 AFG3L2Q9Y4W6 797 aa19.37■□□□□ 0.69
SRRT-209ENST00000474896 A0A0G2JLL6 359 aaPredicted RBP19.36■□□□□ 0.69
SRRT-209ENST00000474896 CCL5P13501 91 aa19.36■□□□□ 0.69
SRRT-209ENST00000474896 PRKCZQ05513 592 aa19.36■□□□□ 0.69
SRRT-209ENST00000474896 PICALMQ13492 652 aa19.36■□□□□ 0.69
SRRT-209ENST00000474896 SPTY2D1Q68D10 685 aaPredicted RBP19.36■□□□□ 0.69
SRRT-209ENST00000474896 GADL1Q6ZQY3 521 aa19.36■□□□□ 0.69
SRRT-209ENST00000474896 PRRT2Q7Z6L0 340 aaPredicted RBP19.36■□□□□ 0.69
SRRT-209ENST00000474896 NKX2-3Q8TAU0 364 aa19.36■□□□□ 0.69
SRRT-209ENST00000474896 DPF3Q92784 378 aa19.36■□□□□ 0.69
SRRT-209ENST00000474896 RNF208Q9H0X6 261 aa19.36■□□□□ 0.69
SRRT-209ENST00000474896 DDX4Q9NQI0 724 aaKnown RBP19.36■□□□□ 0.69
SRRT-209ENST00000474896 CTNND1O60716 968 aaKnown RBP19.35■□□□□ 0.69
SRRT-209ENST00000474896 GJB1P08034 283 aa19.35■□□□□ 0.69
SRRT-209ENST00000474896 BTDP43251 543 aa19.35■□□□□ 0.69
SRRT-209ENST00000474896 UBXN2AP68543 259 aa19.35■□□□□ 0.69
SRRT-209ENST00000474896 TFCP2Q12800 502 aa19.35■□□□□ 0.69
SRRT-209ENST00000474896 XAGE2Q96GT9 111 aa19.35■□□□□ 0.69
SRRT-209ENST00000474896 GABRQQ9UN88 632 aa19.35■□□□□ 0.69
SRRT-209ENST00000474896 AKAP2Q9Y2D5 859 aa19.35■□□□□ 0.69
SRRT-209ENST00000474896 CEP290O15078 2479 aa19.34■□□□□ 0.69
SRRT-209ENST00000474896 A0A1B0GUL7 405 aa19.34■□□□□ 0.69
SRRT-209ENST00000474896 GJA8P48165 433 aa19.34■□□□□ 0.69
SRRT-209ENST00000474896 ERICH6Q7L0X2 663 aa19.34■□□□□ 0.69
SRRT-209ENST00000474896 PDS5AQ29RF7 1337 aaKnown RBP19.33■□□□□ 0.69
SRRT-209ENST00000474896 SRGAP3O43295 1099 aa19.33■□□□□ 0.68
SRRT-209ENST00000474896 MECOMQ03112 1051 aa19.33■□□□□ 0.68
SRRT-209ENST00000474896 NEUROD6Q96NK8 337 aa19.33■□□□□ 0.68
SRRT-209ENST00000474896 SLC45A1Q9Y2W3 748 aa19.33■□□□□ 0.68
SRRT-209ENST00000474896 MROH7-TTC4A0A0A0MT08 1334 aa19.32■□□□□ 0.68
SRRT-209ENST00000474896 GPR75-ASB3A0A0A6YYF3 556 aa19.32■□□□□ 0.68
SRRT-209ENST00000474896 TRIM75PA6NK02 468 aa19.32■□□□□ 0.68
SRRT-209ENST00000474896 GNAI3P08754 354 aa19.32■□□□□ 0.68
SRRT-209ENST00000474896 RARSP54136 660 aaKnown RBP19.32■□□□□ 0.68
SRRT-209ENST00000474896 MVPQ14764 893 aaKnown RBP19.32■□□□□ 0.68
SRRT-209ENST00000474896 SLAIN1Q8ND83 568 aa19.32■□□□□ 0.68
SRRT-209ENST00000474896 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.32■□□□□ 0.68
SRRT-209ENST00000474896 DOCK2Q92608 1830 aa19.32■□□□□ 0.68
SRRT-209ENST00000474896 RFX7Q2KHR2 1363 aa19.32■□□□□ 0.68
SRRT-209ENST00000474896 MGAMO43451 1857 aa19.31■□□□□ 0.68
SRRT-209ENST00000474896 ADCY3O60266 1144 aa19.31■□□□□ 0.68
SRRT-209ENST00000474896 FLT3LGP49771 235 aa19.31■□□□□ 0.68
SRRT-209ENST00000474896 RHBDL3P58872 404 aa19.31■□□□□ 0.68
SRRT-209ENST00000474896 CCDC84Q86UT8 332 aaPredicted RBP19.31■□□□□ 0.68
SRRT-209ENST00000474896 SMCR8Q8TEV9 937 aaPredicted RBP19.31■□□□□ 0.68
SRRT-209ENST00000474896 ZNF384Q8TF68 577 aa19.31■□□□□ 0.68
SRRT-209ENST00000474896 ARHGAP45Q92619 1136 aa19.31■□□□□ 0.68
SRRT-209ENST00000474896 UNC93B1Q9H1C4 597 aa19.31■□□□□ 0.68
SRRT-209ENST00000474896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.31■□□□□ 0.68
SRRT-209ENST00000474896 TBC1D12O60347 775 aa19.3■□□□□ 0.68
SRRT-209ENST00000474896 CHRDL2Q6WN34 429 aa19.3■□□□□ 0.68
SRRT-209ENST00000474896 TBC1D9Q6ZT07 1266 aa19.3■□□□□ 0.68
SRRT-209ENST00000474896 UBE2Q1Q7Z7E8 422 aa19.3■□□□□ 0.68
SRRT-209ENST00000474896 U2AF1L4Q8WU68 220 aaKnown RBP19.3■□□□□ 0.68
SRRT-209ENST00000474896 HTATIP2Q9BUP3 242 aa19.3■□□□□ 0.68
SRRT-209ENST00000474896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.3■□□□□ 0.68
SRRT-209ENST00000474896 HMG20BQ9P0W2 317 aa19.3■□□□□ 0.68
SRRT-209ENST00000474896 TNPO2O14787 897 aaKnown RBP19.29■□□□□ 0.68
SRRT-209ENST00000474896 LDHCP07864 332 aa19.29■□□□□ 0.68
SRRT-209ENST00000474896 MTX1Q13505 466 aa19.29■□□□□ 0.68
SRRT-209ENST00000474896 GORABQ5T7V8 394 aa19.29■□□□□ 0.68
SRRT-209ENST00000474896 SPATA5Q8NB90 893 aa19.29■□□□□ 0.68
SRRT-209ENST00000474896 AGTPBP1Q9UPW5 1226 aa19.29■□□□□ 0.68
SRRT-209ENST00000474896 FAM196BA6NMK8 535 aa19.28■□□□□ 0.68
SRRT-209ENST00000474896 NPM3O75607 178 aaKnown RBP19.28■□□□□ 0.68
SRRT-209ENST00000474896 SGPL1O95470 568 aa19.28■□□□□ 0.68
SRRT-209ENST00000474896 ELNP15502 786 aa19.28■□□□□ 0.68
SRRT-209ENST00000474896 GSTO1P78417 241 aa19.28■□□□□ 0.68
SRRT-209ENST00000474896 HNRNPUQ00839 825 aaKnown RBP eCLIP19.28■□□□□ 0.68
SRRT-209ENST00000474896 TREML2Q5T2D2 321 aa19.28■□□□□ 0.68
SRRT-209ENST00000474896 PI16Q6UXB8 463 aa19.28■□□□□ 0.68
SRRT-209ENST00000474896 ANKRD13CQ8N6S4 541 aa19.28■□□□□ 0.68
SRRT-209ENST00000474896 NSUN4Q96CB9 384 aaKnown RBP19.28■□□□□ 0.68
SRRT-209ENST00000474896 TRIOBPQ9H2D6 2365 aa19.28■□□□□ 0.68
SRRT-209ENST00000474896 SPP2Q13103 211 aa19.27■□□□□ 0.68
SRRT-209ENST00000474896 PXYLP1Q8TE99 480 aa19.27■□□□□ 0.68
SRRT-209ENST00000474896 OSBPL5Q9H0X9 879 aaPredicted RBP19.27■□□□□ 0.68
SRRT-209ENST00000474896 RAI14Q9P0K7 980 aa19.27■□□□□ 0.68
SRRT-209ENST00000474896 RBM27Q9P2N5 1060 aaKnown RBP19.27■□□□□ 0.68
SRRT-209ENST00000474896 PHIPQ8WWQ0 1821 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms