RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 DNAJC2Q99543 621 aaKnown RBP8.51□□□□□ -1.05
LIMD1-204ENST00000474665 MRIQ9BWK5 157 aa8.51□□□□□ -1.05
LIMD1-204ENST00000474665 ABCF2Q9UG63 623 aa8.51□□□□□ -1.05
LIMD1-204ENST00000474665 SERPINA10Q9UK55 444 aa8.51□□□□□ -1.05
LIMD1-204ENST00000474665 DAGLAQ9Y4D2 1042 aa8.51□□□□□ -1.05
LIMD1-204ENST00000474665 GAKO14976 1311 aa8.51□□□□□ -1.05
LIMD1-204ENST00000474665 MAST2Q6P0Q8 1798 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 AK9Q5TCS8 1911 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 TCRBV5S4A2TA0A5A2 114 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 GLRX3O76003 335 aaKnown RBP8.5□□□□□ -1.05
LIMD1-204ENST00000474665 KIF4BQ2VIQ3 1234 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 CFAP100Q494V2 611 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 HHIPL2Q6UWX4 724 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 CD99L2Q8TCZ2 262 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 FAM163AQ96GL9 167 aaPredicted RBP8.5□□□□□ -1.05
LIMD1-204ENST00000474665 ZNF333Q96JL9 665 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 ZDHHC15Q96MV8 337 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 CFHR5Q9BXR6 569 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 PAG1Q9NWQ8 432 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 SCAF8Q9UPN6 1271 aaKnown RBP8.5□□□□□ -1.05
LIMD1-204ENST00000474665 HTTP42858 3142 aa8.5□□□□□ -1.05
LIMD1-204ENST00000474665 UNC80Q8N2C7 3258 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 IDH1O75874 414 aaKnown RBP8.49□□□□□ -1.05
LIMD1-204ENST00000474665 GSPT1P15170 499 aaKnown RBP8.49□□□□□ -1.05
LIMD1-204ENST00000474665 PDE6AP16499 860 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 MMP14P50281 582 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 RHBDL3P58872 404 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 CAP1Q01518 475 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 SPTY2D1Q68D10 685 aaPredicted RBP8.49□□□□□ -1.05
LIMD1-204ENST00000474665 ERICH6Q7L0X2 663 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 SULF1Q8IWU6 871 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 OGFOD1Q8N543 542 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 ZGPATQ8N5A5 531 aaKnown RBP8.49□□□□□ -1.05
LIMD1-204ENST00000474665 TEKT1Q969V4 418 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 MTMR10Q9NXD2 777 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 RAI14Q9P0K7 980 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 LRP2BPQ9P2M1 347 aa8.49□□□□□ -1.05
LIMD1-204ENST00000474665 RFX7Q2KHR2 1363 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 CENPFP49454 3210 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 GPR75-ASB3A0A0A6YYF3 556 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 CLRN2A0PK11 232 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 ERC2O15083 957 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 PLA2G5P39877 138 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 CACNB3P54284 484 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 NFIAQ12857 509 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 DLGAP5Q15398 846 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 SPDYE2Q495Y8 402 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 TTC22Q5TAA0 569 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 ANGEL2Q5VTE6 544 aaKnown RBP8.48□□□□□ -1.05
LIMD1-204ENST00000474665 CDC42EP5Q6NZY7 148 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 DZIP1Q86YF9 867 aaKnown RBP8.48□□□□□ -1.05
LIMD1-204ENST00000474665 CDAN1Q8IWY9 1227 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 MAGEB6Q8N7X4 407 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 KBTBD3Q8NAB2 608 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 FAM122AQ96E09 287 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 GPATCH3Q96I76 525 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 TDRD3Q9H7E2 651 aaKnown RBP8.48□□□□□ -1.05
LIMD1-204ENST00000474665 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 GGA3Q9NZ52 723 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 ZNF70Q9UC06 446 aaPredicted RBP8.48□□□□□ -1.05
LIMD1-204ENST00000474665 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
LIMD1-204ENST00000474665 FOCADQ5VW36 1801 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 WDHD1O75717 1129 aaPredicted RBP8.47□□□□□ -1.05
LIMD1-204ENST00000474665 CYP7A1P22680 504 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 ADD2P35612 726 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 RBM5P52756 815 aaKnown RBP eCLIP8.47□□□□□ -1.05
LIMD1-204ENST00000474665 PPP4CP60510 307 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 DYNLL1P63167 89 aaKnown RBP8.47□□□□□ -1.05
LIMD1-204ENST00000474665 FKBP1BP68106 108 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 SREBF2Q12772 1141 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 TTF1Q15361 905 aaPredicted RBP8.47□□□□□ -1.05
LIMD1-204ENST00000474665 SLC9C2Q5TAH2 1124 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 PRAMEF18Q5VWM3 479 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 NAA16Q6N069 864 aaPredicted RBP8.47□□□□□ -1.05
LIMD1-204ENST00000474665 ZFPM1Q8IX07 1006 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 MIGA1Q8NAN2 632 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 RIOK1Q9BRS2 568 aaKnown RBP8.47□□□□□ -1.05
LIMD1-204ENST00000474665 ZBTB47Q9UFB7 747 aaPredicted RBP8.47□□□□□ -1.05
LIMD1-204ENST00000474665 MAST3O60307 1309 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 ZNF532Q9HCE3 1301 aa8.47□□□□□ -1.05
LIMD1-204ENST00000474665 BAZ2AQ9UIF9 1905 aaKnown RBP8.46□□□□□ -1.05
LIMD1-204ENST00000474665 A0A1W2PPC1 479 aa8.46□□□□□ -1.06
LIMD1-204ENST00000474665 IGSF3O75054 1194 aa8.46□□□□□ -1.06
LIMD1-204ENST00000474665 SDSP20132 328 aa8.46□□□□□ -1.06
LIMD1-204ENST00000474665 BTDP43251 543 aa8.46□□□□□ -1.06
LIMD1-204ENST00000474665 MAP3K12Q12852 859 aa8.46□□□□□ -1.06
LIMD1-204ENST00000474665 SH3RF3Q8TEJ3 882 aaPredicted RBP8.46□□□□□ -1.06
LIMD1-204ENST00000474665 OSBP2Q969R2 916 aa8.46□□□□□ -1.06
LIMD1-204ENST00000474665 ERO1AQ96HE7 468 aa8.46□□□□□ -1.06
LIMD1-204ENST00000474665 TEPSINQ96N21 525 aa8.46□□□□□ -1.06
LIMD1-204ENST00000474665 SEC62Q99442 399 aaKnown RBP8.46□□□□□ -1.06
LIMD1-204ENST00000474665 PUS7LQ9H0K6 701 aaKnown RBP8.46□□□□□ -1.06
LIMD1-204ENST00000474665 DDX4Q9NQI0 724 aaKnown RBP8.46□□□□□ -1.06
LIMD1-204ENST00000474665 AATFQ9NY61 560 aaKnown RBP eCLIP8.46□□□□□ -1.06
LIMD1-204ENST00000474665 FAM198AQ9UFP1 575 aa8.46□□□□□ -1.06
LIMD1-204ENST00000474665 SIPA1L1O43166 1804 aa8.45□□□□□ -1.06
LIMD1-204ENST00000474665 SSC5DA1L4H1 1573 aa8.45□□□□□ -1.06
LIMD1-204ENST00000474665 MYH1P12882 1939 aa8.45□□□□□ -1.06
LIMD1-204ENST00000474665 FOXP2O15409 715 aa8.45□□□□□ -1.06
LIMD1-204ENST00000474665 RNF113AO15541 343 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms