RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 GNL3LQ9NVN8 582 aaKnown RBP10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 CSADQ9Y600 493 aa10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 SNCAIPQ9Y6H5 919 aa10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 SPDYE5A6NIY4 337 aa10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 IPO8O15397 1037 aaKnown RBP10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 LDHBP07195 334 aaKnown RBP10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 TIMM10P62072 90 aa10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 TFCP2Q12800 502 aa10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 NFIAQ12857 509 aa10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 OTUD7BQ6GQQ9 843 aa10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 ATF7IPQ6VMQ6 1270 aa10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 FAM151AQ8WW52 585 aa10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 ZKSCAN4Q969J2 545 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 CLUAP1Q96AJ1 413 aa10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 WRNIP1Q96S55 665 aa10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 DENND2AQ9ULE3 1009 aa10.89□□□□□ -0.67
TNFRSF9-202ENST00000474475 CCL15-CCL14A0A0B4J2E2 113 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 A0A1B0GUL7 405 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 GTF2A2P52657 109 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 CAP1Q01518 475 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 TCP10Q12799 353 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 RASGRF1Q13972 1273 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 CCL15Q16663 113 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 MIGA2Q7L4E1 593 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 OTOP1Q7RTM1 612 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 HOOK2Q96ED9 719 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 XAGE2Q96GT9 111 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 FAM198AQ9UFP1 575 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 TRIM17Q9Y577 477 aa10.88□□□□□ -0.67
TNFRSF9-202ENST00000474475 PNMA6EA0A0J9YXQ4 647 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 GNAI2P04899 355 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 PDE4AP27815 886 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 INPP5BP32019 993 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 DCAF15Q66K64 600 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 ERO1BQ86YB8 467 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 ZFPM1Q8IX07 1006 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 FAM43AQ8N2R8 423 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 TMEM57Q8N5G2 664 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 CD99L2Q8TCZ2 262 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 ERO1AQ96HE7 468 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 ZNF341Q9BYN7 854 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 USP40Q9NVE5 1235 aa10.87□□□□□ -0.67
TNFRSF9-202ENST00000474475 GAKO14976 1311 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 PDS5AQ29RF7 1337 aaKnown RBP10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 PDE4DIPQ5VU43 2346 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 MYH2Q9UKX2 1941 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 IRF6O14896 467 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 HNRNPUQ00839 825 aaKnown RBP eCLIP10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 SP3Q02447 781 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 PPIL2Q13356 520 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 TAF1CQ15572 869 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 ABCF2Q9UG63 623 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 ZNF112Q9UJU3 913 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 AKAP2Q9Y2D5 859 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 RFX7Q2KHR2 1363 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 DOCK2Q92608 1830 aa10.86□□□□□ -0.67
TNFRSF9-202ENST00000474475 CETPP11597 493 aa10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 MVPQ14764 893 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 ZKSCAN2Q63HK3 967 aa10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 ZGPATQ8N5A5 531 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 ZNF384Q8TF68 577 aa10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 NEUROD6Q96NK8 337 aa10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 TMEM121BQ9BXQ6 578 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 IDI2Q9BXS1 227 aa10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 ZFYVE28Q9HCC9 887 aa10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 HMG20BQ9P0W2 317 aa10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 PTPN22Q9Y2R2 807 aa10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 ATRNL1Q5VV63 1379 aa10.85□□□□□ -0.67
TNFRSF9-202ENST00000474475 AK9Q5TCS8 1911 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 POTEFA5A3E0 1075 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 BTBD19C9JJ37 291 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 ENTPD3O75355 529 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 RGS3P49796 1198 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 PPATQ06203 517 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 SNAPC2Q13487 334 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 PI16Q6UXB8 463 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 SH3BP5LQ7L8J4 393 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 DZIP1Q86YF9 867 aaKnown RBP10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 FAM163AQ96GL9 167 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 EFCC1Q9HA90 598 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 ZSWIM8A7E2V4 1837 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 MROH7-TTC4A0A0A0MT08 1334 aa10.84□□□□□ -0.67
TNFRSF9-202ENST00000474475 WDHD1O75717 1129 aaPredicted RBP10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 SLURP2P0DP57 97 aa10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 BTDP43251 543 aa10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 MECOMQ03112 1051 aa10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 G3BP1Q13283 466 aaKnown RBP eCLIP10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 NOL9Q5SY16 702 aaKnown RBP10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 SPTY2D1Q68D10 685 aaPredicted RBP10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 TBC1D9Q6ZT07 1266 aa10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 SPATA5Q8NB90 893 aa10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 ZCCHC17Q9NP64 241 aaKnown RBP10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 DDX4Q9NQI0 724 aaKnown RBP10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 KCNH4Q9UQ05 1017 aa10.83□□□□□ -0.68
TNFRSF9-202ENST00000474475 GPR75-ASB3A0A0A6YYF3 556 aa10.82□□□□□ -0.68
TNFRSF9-202ENST00000474475 DDTLA6NHG4 134 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms