RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 FKTNO75072 461 aa22.73■■□□□ 1.23
CCDC171-206ENST00000474193 PLCG2P16885 1265 aa22.73■■□□□ 1.23
CCDC171-206ENST00000474193 PICALMQ13492 652 aa22.73■■□□□ 1.23
CCDC171-206ENST00000474193 ZNF296Q8WUU4 475 aaPredicted RBP22.73■■□□□ 1.23
CCDC171-206ENST00000474193 DBNLQ9UJU6 430 aaKnown RBP22.73■■□□□ 1.23
CCDC171-206ENST00000474193 TESPA1A2RU30 521 aaPredicted RBP22.72■■□□□ 1.23
CCDC171-206ENST00000474193 CCDC85CA6NKD9 419 aa22.72■■□□□ 1.23
CCDC171-206ENST00000474193 RAB11FIP3O75154 756 aa22.72■■□□□ 1.23
CCDC171-206ENST00000474193 CETPP11597 493 aa22.72■■□□□ 1.23
CCDC171-206ENST00000474193 GJA5P36382 358 aa22.72■■□□□ 1.23
CCDC171-206ENST00000474193 RHPN1Q8TCX5 695 aa22.72■■□□□ 1.23
CCDC171-206ENST00000474193 CCL15-CCL14A0A0B4J2E2 113 aa22.71■■□□□ 1.23
CCDC171-206ENST00000474193 APBB1O00213 710 aa22.71■■□□□ 1.23
CCDC171-206ENST00000474193 NPM3O75607 178 aaKnown RBP22.71■■□□□ 1.23
CCDC171-206ENST00000474193 PPATQ06203 517 aa22.71■■□□□ 1.23
CCDC171-206ENST00000474193 SNAPC2Q13487 334 aa22.71■■□□□ 1.23
CCDC171-206ENST00000474193 PKN2Q16513 984 aaKnown RBP22.71■■□□□ 1.23
CCDC171-206ENST00000474193 CCL15Q16663 113 aa22.71■■□□□ 1.23
CCDC171-206ENST00000474193 EXOC6Q8TAG9 804 aa22.71■■□□□ 1.23
CCDC171-206ENST00000474193 IGF2BP3O00425 579 aaKnown RBP eCLIP22.7■■□□□ 1.22
CCDC171-206ENST00000474193 IFIT2P09913 472 aaKnown RBP22.7■■□□□ 1.22
CCDC171-206ENST00000474193 PPIL2Q13356 520 aa22.7■■□□□ 1.22
CCDC171-206ENST00000474193 TEX11Q8IYF3 940 aa22.7■■□□□ 1.22
CCDC171-206ENST00000474193 ZNF112Q9UJU3 913 aa22.7■■□□□ 1.22
CCDC171-206ENST00000474193 SNCAIPQ9Y6H5 919 aa22.7■■□□□ 1.22
CCDC171-206ENST00000474193 CYP2E1P05181 493 aaPredicted RBP22.69■■□□□ 1.22
CCDC171-206ENST00000474193 INPP5BP32019 993 aa22.69■■□□□ 1.22
CCDC171-206ENST00000474193 ZAP70P43403 619 aa22.69■■□□□ 1.22
CCDC171-206ENST00000474193 ZFPM1Q8IX07 1006 aa22.69■■□□□ 1.22
CCDC171-206ENST00000474193 CNKSR2Q8WXI2 1034 aa22.69■■□□□ 1.22
CCDC171-206ENST00000474193 MS4A4AQ96JQ5 239 aa22.69■■□□□ 1.22
CCDC171-206ENST00000474193 BCL11AQ9H165 835 aa22.69■■□□□ 1.22
CCDC171-206ENST00000474193 ZFYVE28Q9HCC9 887 aa22.69■■□□□ 1.22
CCDC171-206ENST00000474193 IL1RAPL2Q9NP60 686 aa22.69■■□□□ 1.22
CCDC171-206ENST00000474193 PICK1Q9NRD5 415 aa22.69■■□□□ 1.22
CCDC171-206ENST00000474193 RHBDL3P58872 404 aa22.68■■□□□ 1.22
CCDC171-206ENST00000474193 TLR7Q9NYK1 1049 aaKnown RBP22.68■■□□□ 1.22
CCDC171-206ENST00000474193 OTOFQ9HC10 1997 aa22.67■■□□□ 1.22
CCDC171-206ENST00000474193 IRF6O14896 467 aa22.67■■□□□ 1.22
CCDC171-206ENST00000474193 IDH1O75874 414 aaKnown RBP22.67■■□□□ 1.22
CCDC171-206ENST00000474193 MAP3K12Q12852 859 aa22.67■■□□□ 1.22
CCDC171-206ENST00000474193 ARHGEF6Q15052 776 aa22.67■■□□□ 1.22
CCDC171-206ENST00000474193 TTF1Q15361 905 aaPredicted RBP22.67■■□□□ 1.22
CCDC171-206ENST00000474193 TAF1CQ15572 869 aaPredicted RBP22.67■■□□□ 1.22
CCDC171-206ENST00000474193 TMED8Q6PL24 325 aaPredicted RBP22.67■■□□□ 1.22
CCDC171-206ENST00000474193 CERS3Q8IU89 383 aa22.67■■□□□ 1.22
CCDC171-206ENST00000474193 NOL9Q5SY16 702 aaKnown RBP22.66■■□□□ 1.22
CCDC171-206ENST00000474193 ZNF384Q8TF68 577 aa22.66■■□□□ 1.22
CCDC171-206ENST00000474193 BRI3BPQ8WY22 251 aa22.66■■□□□ 1.22
CCDC171-206ENST00000474193 PTPN18Q99952 460 aa22.66■■□□□ 1.22
CCDC171-206ENST00000474193 AATFQ9NY61 560 aaKnown RBP eCLIP22.66■■□□□ 1.22
CCDC171-206ENST00000474193 DDTLA6NHG4 134 aaPredicted RBP22.65■■□□□ 1.22
CCDC171-206ENST00000474193 CYP7A1P22680 504 aa22.65■■□□□ 1.22
CCDC171-206ENST00000474193 PPP4CP60510 307 aa22.65■■□□□ 1.22
CCDC171-206ENST00000474193 CRHR2Q13324 411 aa22.65■■□□□ 1.22
CCDC171-206ENST00000474193 ERO1AQ96HE7 468 aa22.65■■□□□ 1.22
CCDC171-206ENST00000474193 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.65■■□□□ 1.22
CCDC171-206ENST00000474193 ZCCHC17Q9NP64 241 aaKnown RBP22.65■■□□□ 1.22
CCDC171-206ENST00000474193 DDX4Q9NQI0 724 aaKnown RBP22.65■■□□□ 1.22
CCDC171-206ENST00000474193 CTNND1O60716 968 aaKnown RBP22.64■■□□□ 1.21
CCDC171-206ENST00000474193 MAP3K10Q02779 954 aa22.64■■□□□ 1.21
CCDC171-206ENST00000474193 SIRT2Q8IXJ6 389 aa22.64■■□□□ 1.21
CCDC171-206ENST00000474193 SCYL3Q8IZE3 742 aa22.64■■□□□ 1.21
CCDC171-206ENST00000474193 OSBPL5Q9H0X9 879 aaPredicted RBP22.64■■□□□ 1.21
CCDC171-206ENST00000474193 DHX36Q9H2U1 1008 aaKnown RBP22.64■■□□□ 1.21
CCDC171-206ENST00000474193 R3HDMLQ9H3Y0 253 aa22.64■■□□□ 1.21
CCDC171-206ENST00000474193 TBC1D12O60347 775 aa22.63■■□□□ 1.21
CCDC171-206ENST00000474193 SP3Q02447 781 aa22.63■■□□□ 1.21
CCDC171-206ENST00000474193 SH3BP5LQ7L8J4 393 aa22.63■■□□□ 1.21
CCDC171-206ENST00000474193 SH3RF3Q8TEJ3 882 aaPredicted RBP22.63■■□□□ 1.21
CCDC171-206ENST00000474193 TRIM34Q9BYJ4 488 aa22.63■■□□□ 1.21
CCDC171-206ENST00000474193 PIH1D3Q9NQM4 214 aaKnown RBP22.63■■□□□ 1.21
CCDC171-206ENST00000474193 CXCL11O14625 94 aa22.62■■□□□ 1.21
CCDC171-206ENST00000474193 PI4KBQ9UBF8 816 aa22.62■■□□□ 1.21
CCDC171-206ENST00000474193 PCDHB15Q9Y5E8 787 aa22.62■■□□□ 1.21
CCDC171-206ENST00000474193 RFX7Q2KHR2 1363 aa22.62■■□□□ 1.21
CCDC171-206ENST00000474193 ATRNL1Q5VV63 1379 aa22.62■■□□□ 1.21
CCDC171-206ENST00000474193 LAMB1P07942 1786 aa22.61■■□□□ 1.21
CCDC171-206ENST00000474193 PHF20L1A8MW92 1017 aa22.61■■□□□ 1.21
CCDC171-206ENST00000474193 MAGEB6Q8N7X4 407 aa22.61■■□□□ 1.21
CCDC171-206ENST00000474193 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.61■■□□□ 1.21
CCDC171-206ENST00000474193 TGFBRAP1Q8WUH2 860 aa22.61■■□□□ 1.21
CCDC171-206ENST00000474193 LRRCC1Q9C099 1032 aa22.61■■□□□ 1.21
CCDC171-206ENST00000474193 HERC5Q9UII4 1024 aaKnown RBP22.61■■□□□ 1.21
CCDC171-206ENST00000474193 KCNH4Q9UQ05 1017 aa22.61■■□□□ 1.21
CCDC171-206ENST00000474193 ZHX2Q9Y6X8 837 aa22.61■■□□□ 1.21
CCDC171-206ENST00000474193 DOCK2Q92608 1830 aa22.6■■□□□ 1.21
CCDC171-206ENST00000474193 KIF22Q14807 665 aa22.6■■□□□ 1.21
CCDC171-206ENST00000474193 FBXO46Q6PJ61 603 aaPredicted RBP22.6■■□□□ 1.21
CCDC171-206ENST00000474193 FASTKD5Q7L8L6 764 aaKnown RBP22.6■■□□□ 1.21
CCDC171-206ENST00000474193 FAM43AQ8N2R8 423 aa22.6■■□□□ 1.21
CCDC171-206ENST00000474193 TRIM17Q9Y577 477 aa22.6■■□□□ 1.21
CCDC171-206ENST00000474193 BTBD19C9JJ37 291 aa22.59■■□□□ 1.21
CCDC171-206ENST00000474193 USP5P45974 858 aa22.59■■□□□ 1.21
CCDC171-206ENST00000474193 FOXP4Q8IVH2 680 aaPredicted RBP22.59■■□□□ 1.21
CCDC171-206ENST00000474193 MAPKAPK5Q8IW41 473 aa22.59■■□□□ 1.21
CCDC171-206ENST00000474193 CRACR2BQ8N4Y2 399 aaPredicted RBP22.59■■□□□ 1.21
CCDC171-206ENST00000474193 DNAJC2Q99543 621 aaKnown RBP22.59■■□□□ 1.21
CCDC171-206ENST00000474193 RWDD1Q9H446 243 aaPredicted RBP22.59■■□□□ 1.21
CCDC171-206ENST00000474193 COL2A1P02458 1487 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms