RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SART3Q15020 963 aaKnown RBP12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 MAPKAPK5Q8IW41 473 aa12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 ZSCAN29Q8IWY8 852 aaPredicted RBP12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 ZNF384Q8TF68 577 aa12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 SBF1O95248 1867 aa12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 COL4A5P29400 1685 aa12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 FOCADQ5VW36 1801 aa12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 MYH1P12882 1939 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 ERICH2A1L162 156 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 E7EWF7 191 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 FZD9O00144 591 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 TNNI2P48788 182 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 TSGA10IPQ3SY00 556 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 RRP12Q5JTH9 1297 aaKnown RBP12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 C9orf131Q5VYM1 1079 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 RUFY3Q7L099 469 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 TTC6Q86TZ1 520 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 GPC2Q8N158 579 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 IPO9Q96P70 1041 aaKnown RBP12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 UPF3BQ9BZI7 483 aaKnown RBP12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 EPB41L4AQ9HCS5 686 aaPredicted RBP12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 DCP1AQ9NPI6 582 aaPredicted RBP12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 PDRG1Q9NUG6 133 aa12.15□□□□□ -0.46
PRPF38A-202ENST00000474048 CDK5RAP2Q96SN8 1893 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 FLT1P17948 1338 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 USP17L12C9JPN9 530 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 USP17L21D6R901 530 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 MCM5P33992 734 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 GMPSP49915 693 aaPredicted RBP12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 TNFAIP1Q13829 316 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 AKNAD1Q5T1N1 836 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 ESR2Q92731 530 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 DPF2Q92785 391 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 KCNB2Q92953 911 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 VEZTQ9HBM0 779 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 MYOZ2Q9NPC6 264 aa12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 SAP30BPQ9UHR5 308 aaKnown RBP12.14□□□□□ -0.47
PRPF38A-202ENST00000474048 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 RPS6KB1P23443 525 aa12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 NT5C2P49902 561 aa12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 CTDSPL2Q05D32 466 aa12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 SBK1Q52WX2 424 aa12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 CDC42EP5Q6NZY7 148 aa12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 NOL8Q76FK4 1167 aaKnown RBP12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 MICALL2Q8IY33 904 aa12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 STK11IPQ8N1F8 1099 aa12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 CRACR2BQ8N4Y2 399 aaPredicted RBP12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 UBAC1Q9BSL1 405 aa12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 TDRD3Q9H7E2 651 aaKnown RBP12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 CNOT7Q9UIV1 285 aaKnown RBP12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 NAP1L2Q9ULW6 460 aaPredicted RBP12.13□□□□□ -0.47
PRPF38A-202ENST00000474048 ZNF541Q9H0D2 1346 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 MYH8P13535 1937 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 SPDYE2BA6NHP3 402 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 K7ELQ4 463 aaPredicted RBP12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 SPDYE6P0CI01 402 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 RHBDL3P58872 404 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 SLC4A8Q2Y0W8 1093 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 ADCK5Q3MIX3 580 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 RBM26Q5T8P6 1007 aaKnown RBP12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 APOBEC3HQ6NTF7 200 aaKnown RBP12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 CTR9Q6PD62 1173 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 DHX32Q7L7V1 743 aaKnown RBP12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 IQCA1Q86XH1 822 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 SNX21Q969T3 373 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 CHMP4CQ96CF2 233 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 ANAPC4Q9UJX5 808 aa12.12□□□□□ -0.47
PRPF38A-202ENST00000474048 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 FOXP2O15409 715 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 TCP10Q12799 353 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 SYNE3Q6ZMZ3 975 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 TBC1D10CQ8IV04 446 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 ZNF444Q8N0Y2 327 aaPredicted RBP12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 MTMR14Q8NCE2 650 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 IL17RAQ96F46 866 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 ZSCAN31Q96LW9 406 aaPredicted RBP12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 GMLQ99445 158 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 KIF2CQ99661 725 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
PRPF38A-202ENST00000474048 CLRN2A0PK11 232 aa12.1□□□□□ -0.47
PRPF38A-202ENST00000474048 B4E1Z4 1266 aa12.1□□□□□ -0.47
PRPF38A-202ENST00000474048 TCP10L2B9ZVM9 353 aa12.1□□□□□ -0.47
PRPF38A-202ENST00000474048 PRC1O43663 620 aa12.1□□□□□ -0.47
PRPF38A-202ENST00000474048 ENTPD3O75355 529 aa12.1□□□□□ -0.47
PRPF38A-202ENST00000474048 CCDC178Q5BJE1 867 aa12.1□□□□□ -0.47
PRPF38A-202ENST00000474048 C12orf60Q5U649 245 aa12.1□□□□□ -0.47
PRPF38A-202ENST00000474048 TMEM87BQ96K49 555 aa12.1□□□□□ -0.47
PRPF38A-202ENST00000474048 IDI2Q9BXS1 227 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms