RNA–Protein interactions for RNA: ENST00000473997.5

CDK5RAP1-210, Transcript of CDK5 regulatory subunit associated protein 1, human

TSL 2 BASIC

Gene CDK5RAP1, Length 1,930 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP1-210	ENST00000473997	KDM4A	O75164	1064 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	SLC3A2	P08195	630 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	CYB5R4	Q7L1T6	521 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	MAPKAPK5	Q8IW41	473 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	AMOTL1	Q8IY63	956 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	TEKT1	Q969V4	418 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	ZSWIM5	Q9P217	1185 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	TACC3	Q9Y6A5	838 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	USP17L8	P0C7I0	530 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	IARS	P41252	1262 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	RBM5	P52756	815 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	ANTXR2	P58335	489 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	SLC4A8	Q2Y0W8	1093 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	SBK1	Q52WX2	424 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	HHIPL2	Q6UWX4	724 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	TAOK3	Q9H2K8	898 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	GPHN	Q9NQX3	736 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	SMC3	Q9UQE7	1217 aa		13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	WDR19	Q8NEZ3	1342 aa		13.73	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	SMIM22	K7EJ46	135 aa		13.73	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	RAD17	O75943	681 aa		13.73	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	CYP2D6	P10635	497 aa		13.73	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	NIM1K	Q8IY84	436 aa		13.73	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	FBXL16	Q8N461	479 aa		13.73	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	NLGN2	Q8NFZ4	835 aa		13.73	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	NKX2-3	Q8TAU0	364 aa		13.73	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	AGXT2	Q9BYV1	514 aa		13.73	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	KIAA1551	Q9HCM1	1747 aa		13.73	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	POLR3D	P05423	398 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	CRK	P46108	304 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	RHBDL3	P58872	404 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	NUCB2	P80303	420 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	ILDR2	Q71H61	639 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	USP40	Q9NVE5	1235 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	MKRN1	Q9UHC7	482 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	SAP30BP	Q9UHR5	308 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	RANBP6	O60518	1105 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	PRDM1	O75626	825 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	NFKBIB	Q15653	356 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	ESR2	Q92731	530 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	ZNF274	Q96GC6	653 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	TMEM87B	Q96K49	555 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	MRI	Q9BWK5	157 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	ZNRF3	Q9ULT6	936 aa		13.72	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	SCN9A	Q15858	1988 aa		13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	IFIT3	O14879	490 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	PC	P11498	1178 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	EVX2	Q03828	476 aa		13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	PDE4B	Q07343	736 aa		13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	ST3GAL1	Q11201	340 aa		13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	SART3	Q15020	963 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	TMEM67	Q5HYA8	995 aa		13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	C12orf60	Q5U649	245 aa		13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	NFXL1	Q6ZNB6	911 aa		13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	JDP2	Q8WYK2	163 aa		13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	ZKSCAN3	Q9BRR0	538 aa		13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	ANGEL1	Q9UNK9	670 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP1-210	ENST00000473997	KLF18	A0A0U1RQI7	1052 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	ERICH2	A1L162	156 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	PSMD14	O00487	310 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	PFKFB2	O60825	505 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	DTNB	O60941	627 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	PDIA3	P30101	505 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	CCT2	P78371	535 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	HDLBP	Q00341	1268 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	PICALM	Q13492	652 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	RAB3GAP1	Q15042	981 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	IGDCC4	Q8TDY8	1250 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	GTF3C6	Q969F1	213 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	ZDHHC15	Q96MV8	337 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	FLT1	P17948	1338 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	SH2B2	O14492	632 aa	Predicted RBP	13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	GJB2	P29033	226 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	SCRN1	Q12765	414 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	CDC42EP5	Q6NZY7	148 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	UBAC1	Q9BSL1	405 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	SERPINA10	Q9UK55	444 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	BRPF3	Q9ULD4	1205 aa		13.7	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	NFKBIE	O00221	500 aa		13.69	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	VIL1	P09327	827 aa	Known RBP	13.69	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	FGR	P09769	529 aa		13.69	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	PLCD1	P51178	756 aa		13.69	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	EVC	P57679	992 aa		13.69	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	PKP1	Q13835	747 aa		13.69	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	DYNLL2	Q96FJ2	89 aa		13.69	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	MKNK2	Q9HBH9	465 aa		13.69	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	PCDHAC2	Q9Y5I4	1007 aa		13.69	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	MYO3B	Q8WXR4	1341 aa		13.69	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	WTAP	Q15007	396 aa		13.68	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	TNPO1	Q92973	898 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	CHMP4C	Q96CF2	233 aa		13.68	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	LY9	Q9HBG7	655 aa		13.68	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	TIAM2	Q8IVF5	1701 aa		13.68	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	BRCA1	P38398	1863 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	CCDC69	A6NI79	296 aa		13.68	□□□□□ -0.22
CDK5RAP1-210	ENST00000473997	GOLGA8B	A8MQT2	603 aa		13.68	□□□□□ -0.22

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