RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 PICALMQ13492 652 aa27.57■■■□□ 2
PTP4A1-203ENST00000473334 DGKZQ13574 1117 aa27.57■■■□□ 2
PTP4A1-203ENST00000473334 NOM1Q5C9Z4 860 aaKnown RBP27.57■■■□□ 2
PTP4A1-203ENST00000473334 NAA16Q6N069 864 aaPredicted RBP27.57■■■□□ 2
PTP4A1-203ENST00000473334 ERO1BQ86YB8 467 aa27.57■■■□□ 2
PTP4A1-203ENST00000473334 ABHD8Q96I13 439 aa27.57■■■□□ 2
PTP4A1-203ENST00000473334 MCOLN1Q9GZU1 580 aa27.57■■■□□ 2
PTP4A1-203ENST00000473334 ZNF112Q9UJU3 913 aa27.57■■■□□ 2
PTP4A1-203ENST00000473334 APBB1O00213 710 aa27.56■■■□□ 2
PTP4A1-203ENST00000473334 RAB11FIP3O75154 756 aa27.56■■■□□ 2
PTP4A1-203ENST00000473334 INPP5BP32019 993 aa27.56■■■□□ 2
PTP4A1-203ENST00000473334 OTUD7BQ6GQQ9 843 aa27.56■■■□□ 2
PTP4A1-203ENST00000473334 ZSCAN29Q8IWY8 852 aaPredicted RBP27.56■■■□□ 2
PTP4A1-203ENST00000473334 CLASRPQ8N2M8 674 aaKnown RBP27.56■■■□□ 2
PTP4A1-203ENST00000473334 MS4A4AQ96JQ5 239 aa27.56■■■□□ 2
PTP4A1-203ENST00000473334 NOL10Q9BSC4 688 aaKnown RBP27.56■■■□□ 2
PTP4A1-203ENST00000473334 ATRNL1Q5VV63 1379 aa27.56■■■□□ 2
PTP4A1-203ENST00000473334 NPM3O75607 178 aaKnown RBP27.55■■■□□ 2
PTP4A1-203ENST00000473334 GTF2A2P52657 109 aa27.55■■■□□ 2
PTP4A1-203ENST00000473334 SH3BP5LQ7L8J4 393 aa27.55■■■□□ 2
PTP4A1-203ENST00000473334 PIH1D3Q9NQM4 214 aaKnown RBP27.55■■■□□ 2
PTP4A1-203ENST00000473334 GPR25O00155 361 aa27.54■■■□□ 2
PTP4A1-203ENST00000473334 ZNF296Q8WUU4 475 aaPredicted RBP27.54■■■□□ 2
PTP4A1-203ENST00000473334 DDTLA6NHG4 134 aaPredicted RBP27.53■■■□□ 2
PTP4A1-203ENST00000473334 YTHDC1Q96MU7 727 aaKnown RBP27.53■■■□□ 2
PTP4A1-203ENST00000473334 PTPN18Q99952 460 aa27.53■■■□□ 2
PTP4A1-203ENST00000473334 R3HDMLQ9H3Y0 253 aa27.53■■■□□ 2
PTP4A1-203ENST00000473334 COL2A1P02458 1487 aaPredicted RBP27.52■■■□□ 2
PTP4A1-203ENST00000473334 CCL15-CCL14A0A0B4J2E2 113 aa27.52■■■□□ 2
PTP4A1-203ENST00000473334 BAG3O95817 575 aa27.52■■■□□ 2
PTP4A1-203ENST00000473334 PPIL2Q13356 520 aa27.52■■■□□ 2
PTP4A1-203ENST00000473334 CCL15Q16663 113 aa27.52■■■□□ 2
PTP4A1-203ENST00000473334 NOL9Q5SY16 702 aaKnown RBP27.52■■■□□ 2
PTP4A1-203ENST00000473334 TEX11Q8IYF3 940 aa27.52■■■□□ 2
PTP4A1-203ENST00000473334 PLCG2P16885 1265 aa27.51■■□□□ 1.99
PTP4A1-203ENST00000473334 CTU1Q7Z7A3 348 aaKnown RBP27.51■■□□□ 1.99
PTP4A1-203ENST00000473334 BRI3BPQ8WY22 251 aa27.51■■□□□ 1.99
PTP4A1-203ENST00000473334 AATFQ9NY61 560 aaKnown RBP eCLIP27.51■■□□□ 1.99
PTP4A1-203ENST00000473334 IFIT2P09913 472 aaKnown RBP27.5■■□□□ 1.99
PTP4A1-203ENST00000473334 MAP3K10Q02779 954 aa27.5■■□□□ 1.99
PTP4A1-203ENST00000473334 PPATQ06203 517 aa27.5■■□□□ 1.99
PTP4A1-203ENST00000473334 SH3RF3Q8TEJ3 882 aaPredicted RBP27.5■■□□□ 1.99
PTP4A1-203ENST00000473334 OSBPL5Q9H0X9 879 aaPredicted RBP27.5■■□□□ 1.99
PTP4A1-203ENST00000473334 NDUFB9Q9Y6M9 179 aa27.5■■□□□ 1.99
PTP4A1-203ENST00000473334 CDK5RAP2Q96SN8 1893 aa27.5■■□□□ 1.99
PTP4A1-203ENST00000473334 FOCADQ5VW36 1801 aa27.5■■□□□ 1.99
PTP4A1-203ENST00000473334 IRF6O14896 467 aa27.49■■□□□ 1.99
PTP4A1-203ENST00000473334 FKTNO75072 461 aa27.49■■□□□ 1.99
PTP4A1-203ENST00000473334 IDH1O75874 414 aaKnown RBP27.49■■□□□ 1.99
PTP4A1-203ENST00000473334 PPP4CP60510 307 aa27.49■■□□□ 1.99
PTP4A1-203ENST00000473334 SNAPC2Q13487 334 aa27.49■■□□□ 1.99
PTP4A1-203ENST00000473334 ADGRA1Q86SQ6 560 aa27.49■■□□□ 1.99
PTP4A1-203ENST00000473334 PHF20L1A8MW92 1017 aa27.48■■□□□ 1.99
PTP4A1-203ENST00000473334 CETPP11597 493 aa27.48■■□□□ 1.99
PTP4A1-203ENST00000473334 ANTXR1Q9H6X2 564 aa27.48■■□□□ 1.99
PTP4A1-203ENST00000473334 DOCK1Q14185 1865 aa27.47■■□□□ 1.99
PTP4A1-203ENST00000473334 RRP1P56182 461 aaKnown RBP27.47■■□□□ 1.99
PTP4A1-203ENST00000473334 CRHR2Q13324 411 aa27.47■■□□□ 1.99
PTP4A1-203ENST00000473334 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.47■■□□□ 1.99
PTP4A1-203ENST00000473334 CYP7A1P22680 504 aa27.46■■□□□ 1.99
PTP4A1-203ENST00000473334 MAP3K12Q12852 859 aa27.46■■□□□ 1.99
PTP4A1-203ENST00000473334 TMED8Q6PL24 325 aaPredicted RBP27.46■■□□□ 1.99
PTP4A1-203ENST00000473334 BCL11AQ9H165 835 aa27.46■■□□□ 1.99
PTP4A1-203ENST00000473334 TBC1D12O60347 775 aa27.45■■□□□ 1.98
PTP4A1-203ENST00000473334 SLURP2P0DP57 97 aa27.45■■□□□ 1.98
PTP4A1-203ENST00000473334 TTF1Q15361 905 aaPredicted RBP27.45■■□□□ 1.98
PTP4A1-203ENST00000473334 SCYL3Q8IZE3 742 aa27.45■■□□□ 1.98
PTP4A1-203ENST00000473334 MAGEB6Q8N7X4 407 aa27.45■■□□□ 1.98
PTP4A1-203ENST00000473334 TAF1CQ15572 869 aaPredicted RBP27.44■■□□□ 1.98
PTP4A1-203ENST00000473334 FAM43AQ8N2R8 423 aa27.44■■□□□ 1.98
PTP4A1-203ENST00000473334 LRRCC1Q9C099 1032 aa27.44■■□□□ 1.98
PTP4A1-203ENST00000473334 ZCCHC17Q9NP64 241 aaKnown RBP27.44■■□□□ 1.98
PTP4A1-203ENST00000473334 KCNH4Q9UQ05 1017 aa27.44■■□□□ 1.98
PTP4A1-203ENST00000473334 CTNND1O60716 968 aaKnown RBP27.43■■□□□ 1.98
PTP4A1-203ENST00000473334 CERS3Q8IU89 383 aa27.43■■□□□ 1.98
PTP4A1-203ENST00000473334 TGFBRAP1Q8WUH2 860 aa27.43■■□□□ 1.98
PTP4A1-203ENST00000473334 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.43■■□□□ 1.98
PTP4A1-203ENST00000473334 PICK1Q9NRD5 415 aa27.43■■□□□ 1.98
PTP4A1-203ENST00000473334 FLT1P17948 1338 aa27.42■■□□□ 1.98
PTP4A1-203ENST00000473334 SIPA1L1O43166 1804 aa27.42■■□□□ 1.98
PTP4A1-203ENST00000473334 CCDC85CA6NKD9 419 aa27.42■■□□□ 1.98
PTP4A1-203ENST00000473334 BTBD19C9JJ37 291 aa27.42■■□□□ 1.98
PTP4A1-203ENST00000473334 DYNLL1P63167 89 aaKnown RBP27.42■■□□□ 1.98
PTP4A1-203ENST00000473334 PKN2Q16513 984 aaKnown RBP27.42■■□□□ 1.98
PTP4A1-203ENST00000473334 DHX36Q9H2U1 1008 aaKnown RBP27.42■■□□□ 1.98
PTP4A1-203ENST00000473334 ZFYVE28Q9HCC9 887 aa27.42■■□□□ 1.98
PTP4A1-203ENST00000473334 MAPKAPK5Q8IW41 473 aa27.41■■□□□ 1.98
PTP4A1-203ENST00000473334 DNAJC2Q99543 621 aaKnown RBP27.41■■□□□ 1.98
PTP4A1-203ENST00000473334 PHIPQ8WWQ0 1821 aa27.4■■□□□ 1.98
PTP4A1-203ENST00000473334 ATAD5Q96QE3 1844 aa27.4■■□□□ 1.98
PTP4A1-203ENST00000473334 FAM196BA6NMK8 535 aa27.4■■□□□ 1.98
PTP4A1-203ENST00000473334 PTPRAP18433 802 aa27.4■■□□□ 1.98
PTP4A1-203ENST00000473334 MIGA1Q8NAN2 632 aa27.4■■□□□ 1.98
PTP4A1-203ENST00000473334 HERC5Q9UII4 1024 aaKnown RBP27.4■■□□□ 1.98
PTP4A1-203ENST00000473334 GOLIM4O00461 696 aa27.39■■□□□ 1.98
PTP4A1-203ENST00000473334 CXCL11O14625 94 aa27.39■■□□□ 1.98
PTP4A1-203ENST00000473334 ATP5JP18859 108 aa27.39■■□□□ 1.98
PTP4A1-203ENST00000473334 ERO1AQ96HE7 468 aa27.39■■□□□ 1.98
PTP4A1-203ENST00000473334 DCTPP1Q9H773 170 aa27.39■■□□□ 1.98
PTP4A1-203ENST00000473334 PI4KBQ9UBF8 816 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms