RNA–Protein interactions for RNA: ENST00000473222.1

NR1H3-218, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-218ENST00000473222 TCP10Q12799 353 aa21.31■■□□□ 1
NR1H3-218ENST00000473222 TMEM39BQ9GZU3 492 aa21.31■■□□□ 1
NR1H3-218ENST00000473222 ATP8A2Q9NTI2 1148 aa21.31■■□□□ 1
NR1H3-218ENST00000473222 TRAF5O00463 557 aa21.3■■□□□ 1
NR1H3-218ENST00000473222 PRKAB2O43741 272 aa21.3■■□□□ 1
NR1H3-218ENST00000473222 USP5P45974 858 aa21.3■■□□□ 1
NR1H3-218ENST00000473222 PICALMQ13492 652 aa21.3■■□□□ 1
NR1H3-218ENST00000473222 PRAMEF18Q5VWM3 479 aa21.3■■□□□ 1
NR1H3-218ENST00000473222 CWC27Q6UX04 472 aaKnown RBP21.3■■□□□ 1
NR1H3-218ENST00000473222 MAPKAPK5Q8IW41 473 aa21.3■■□□□ 1
NR1H3-218ENST00000473222 CDCA5Q96FF9 252 aa21.3■■□□□ 1
NR1H3-218ENST00000473222 OSBPL5Q9H0X9 879 aaPredicted RBP21.3■■□□□ 1
NR1H3-218ENST00000473222 SLC4A4Q9Y6R1 1079 aa21.3■■□□□ 1
NR1H3-218ENST00000473222 TRPM7Q96QT4 1865 aa21.29■■□□□ 1
NR1H3-218ENST00000473222 GSG1L2A8MUP6 293 aa21.29■■□□□ 1
NR1H3-218ENST00000473222 PATL2C9JE40 543 aaKnown RBP21.29■■□□□ 1
NR1H3-218ENST00000473222 FMR1Q06787 632 aaKnown RBP eCLIP21.29■■□□□ 1
NR1H3-218ENST00000473222 SUPT20HL1Q3ZLR7 823 aa21.29■■□□□ 1
NR1H3-218ENST00000473222 NBPF12Q5TAG4 269 aaPredicted RBP21.29■■□□□ 1
NR1H3-218ENST00000473222 SH3BP5LQ7L8J4 393 aa21.29■■□□□ 1
NR1H3-218ENST00000473222 MYH1P12882 1939 aa21.29■■□□□ 1
NR1H3-218ENST00000473222 RPAP1Q9BWH6 1393 aaPredicted RBP21.28■■□□□ 1
NR1H3-218ENST00000473222 GIMAP6Q6P9H5 292 aa21.28■■□□□ 1
NR1H3-218ENST00000473222 CCDC129Q6ZRS4 1044 aa21.28■■□□□ 1
NR1H3-218ENST00000473222 SDR42E1Q8WUS8 393 aa21.28■■□□□ 1
NR1H3-218ENST00000473222 RUFY2Q8WXA3 655 aa21.28■■□□□ 1
NR1H3-218ENST00000473222 DCP1AQ9NPI6 582 aaPredicted RBP21.28■■□□□ 1
NR1H3-218ENST00000473222 FLT1P17948 1338 aa21.28■■□□□ 1
NR1H3-218ENST00000473222 DDTLA6NHG4 134 aaPredicted RBP21.27■■□□□ 1
NR1H3-218ENST00000473222 MFAP1P55081 439 aaKnown RBP21.27■■□□□ 1
NR1H3-218ENST00000473222 DHX36Q9H2U1 1008 aaKnown RBP21.27■■□□□ 1
NR1H3-218ENST00000473222 COL2A1P02458 1487 aaPredicted RBP21.26■□□□□ 0.99
NR1H3-218ENST00000473222 ATRNL1Q5VV63 1379 aa21.26■□□□□ 0.99
NR1H3-218ENST00000473222 MAP3K10Q02779 954 aa21.26■□□□□ 0.99
NR1H3-218ENST00000473222 CST9Q5W186 159 aa21.26■□□□□ 0.99
NR1H3-218ENST00000473222 ZNF589Q86UQ0 364 aaPredicted RBP21.26■□□□□ 0.99
NR1H3-218ENST00000473222 CDAN1Q8IWY9 1227 aa21.26■□□□□ 0.99
NR1H3-218ENST00000473222 HOOK2Q96ED9 719 aa21.26■□□□□ 0.99
NR1H3-218ENST00000473222 CCDC171Q6TFL3 1326 aa21.26■□□□□ 0.99
NR1H3-218ENST00000473222 BAZ2AQ9UIF9 1905 aaKnown RBP21.25■□□□□ 0.99
NR1H3-218ENST00000473222 FOXP4Q8IVH2 680 aaPredicted RBP21.25■□□□□ 0.99
NR1H3-218ENST00000473222 ZSCAN29Q8IWY8 852 aaPredicted RBP21.25■□□□□ 0.99
NR1H3-218ENST00000473222 IFNL3Q8IZI9 196 aa21.25■□□□□ 0.99
NR1H3-218ENST00000473222 PALD1Q9ULE6 856 aa21.25■□□□□ 0.99
NR1H3-218ENST00000473222 FOXP2O15409 715 aa21.24■□□□□ 0.99
NR1H3-218ENST00000473222 SGSM2O43147 1006 aa21.24■□□□□ 0.99
NR1H3-218ENST00000473222 CDC45O75419 566 aa21.24■□□□□ 0.99
NR1H3-218ENST00000473222 NF2P35240 595 aa21.24■□□□□ 0.99
NR1H3-218ENST00000473222 ALX1Q15699 326 aa21.24■□□□□ 0.99
NR1H3-218ENST00000473222 METTL16Q86W50 562 aaKnown RBP21.24■□□□□ 0.99
NR1H3-218ENST00000473222 DDRGK1Q96HY6 314 aa21.24■□□□□ 0.99
NR1H3-218ENST00000473222 IL25Q9H293 177 aa21.24■□□□□ 0.99
NR1H3-218ENST00000473222 MCM9Q9NXL9 1143 aa21.24■□□□□ 0.99
NR1H3-218ENST00000473222 PI4KBQ9UBF8 816 aa21.24■□□□□ 0.99
NR1H3-218ENST00000473222 RAD50Q92878 1312 aa21.24■□□□□ 0.99
NR1H3-218ENST00000473222 TBC1D12O60347 775 aa21.23■□□□□ 0.99
NR1H3-218ENST00000473222 CELF2O95319 508 aaKnown RBP21.23■□□□□ 0.99
NR1H3-218ENST00000473222 APPP05067 770 aa21.23■□□□□ 0.99
NR1H3-218ENST00000473222 HSPD1P10809 573 aaKnown RBP21.23■□□□□ 0.99
NR1H3-218ENST00000473222 SBK1Q52WX2 424 aa21.23■□□□□ 0.99
NR1H3-218ENST00000473222 VPS53Q5VIR6 699 aa21.23■□□□□ 0.99
NR1H3-218ENST00000473222 TTC6Q86TZ1 520 aa21.23■□□□□ 0.99
NR1H3-218ENST00000473222 CSRNP1Q96S65 589 aa21.23■□□□□ 0.99
NR1H3-218ENST00000473222 NACAP1Q9BZK3 213 aa21.23■□□□□ 0.99
NR1H3-218ENST00000473222 SAP30BPQ9UHR5 308 aaKnown RBP21.23■□□□□ 0.99
NR1H3-218ENST00000473222 USP17L12C9JPN9 530 aa21.22■□□□□ 0.99
NR1H3-218ENST00000473222 USP17L21D6R901 530 aa21.22■□□□□ 0.99
NR1H3-218ENST00000473222 USP2O75604 605 aaPredicted RBP21.22■□□□□ 0.99
NR1H3-218ENST00000473222 FKBP1BP68106 108 aa21.22■□□□□ 0.99
NR1H3-218ENST00000473222 CTR9Q6PD62 1173 aa21.22■□□□□ 0.99
NR1H3-218ENST00000473222 ESYT1Q9BSJ8 1104 aa21.22■□□□□ 0.99
NR1H3-218ENST00000473222 EPB41L4AQ9HCS5 686 aaPredicted RBP21.22■□□□□ 0.99
NR1H3-218ENST00000473222 PPP1R12BO60237 982 aaPredicted RBP21.21■□□□□ 0.99
NR1H3-218ENST00000473222 POLR3DP05423 398 aaPredicted RBP21.21■□□□□ 0.99
NR1H3-218ENST00000473222 PLCD1P51178 756 aa21.21■□□□□ 0.99
NR1H3-218ENST00000473222 C1QTNF8P60827 252 aa21.21■□□□□ 0.99
NR1H3-218ENST00000473222 MAP3K11Q16584 847 aa21.21■□□□□ 0.99
NR1H3-218ENST00000473222 C12orf60Q5U649 245 aa21.21■□□□□ 0.99
NR1H3-218ENST00000473222 DCAF15Q66K64 600 aa21.21■□□□□ 0.99
NR1H3-218ENST00000473222 CASC1Q6TDU7 716 aa21.21■□□□□ 0.99
NR1H3-218ENST00000473222 C2orf69Q8N8R5 385 aa21.21■□□□□ 0.99
NR1H3-218ENST00000473222 ZNF408Q9H9D4 720 aa21.21■□□□□ 0.99
NR1H3-218ENST00000473222 GBA2Q9HCG7 927 aaPredicted RBP21.21■□□□□ 0.99
NR1H3-218ENST00000473222 FGAP02671 866 aa21.2■□□□□ 0.98
NR1H3-218ENST00000473222 HLA-DOAP06340 250 aa21.2■□□□□ 0.98
NR1H3-218ENST00000473222 APLP1P51693 650 aa21.2■□□□□ 0.98
NR1H3-218ENST00000473222 MIGA2Q7L4E1 593 aa21.2■□□□□ 0.98
NR1H3-218ENST00000473222 DSCC1Q9BVC3 393 aa21.2■□□□□ 0.98
NR1H3-218ENST00000473222 EHD4Q9H223 541 aa21.2■□□□□ 0.98
NR1H3-218ENST00000473222 HERC5Q9UII4 1024 aaKnown RBP21.2■□□□□ 0.98
NR1H3-218ENST00000473222 TAOK2Q9UL54 1235 aa21.2■□□□□ 0.98
NR1H3-218ENST00000473222 NAV1Q8NEY1 1877 aa21.2■□□□□ 0.98
NR1H3-218ENST00000473222 SSC5DA1L4H1 1573 aa21.19■□□□□ 0.98
NR1H3-218ENST00000473222 TMEM88BA6NKF7 163 aa21.19■□□□□ 0.98
NR1H3-218ENST00000473222 ARPP21Q9UBL0 812 aaPredicted RBP21.19■□□□□ 0.98
NR1H3-218ENST00000473222 ZNF112Q9UJU3 913 aa21.19■□□□□ 0.98
NR1H3-218ENST00000473222 UNCXA6NJT0 531 aa21.18■□□□□ 0.98
NR1H3-218ENST00000473222 CYP2D6P10635 497 aa21.18■□□□□ 0.98
NR1H3-218ENST00000473222 TDO2P48775 406 aa21.18■□□□□ 0.98
NR1H3-218ENST00000473222 GABPAQ06546 454 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms