RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 TBC1D8O95759 1140 aa19.03■□□□□ 0.64
MRPL55-226ENST00000473066 CYP2E1P05181 493 aaPredicted RBP19.03■□□□□ 0.64
MRPL55-226ENST00000473066 PLCG2P16885 1265 aa19.03■□□□□ 0.64
MRPL55-226ENST00000473066 GJA5P36382 358 aa19.03■□□□□ 0.64
MRPL55-226ENST00000473066 DGKZQ13574 1117 aa19.03■□□□□ 0.64
MRPL55-226ENST00000473066 ERO1BQ86YB8 467 aa19.03■□□□□ 0.64
MRPL55-226ENST00000473066 IFNL1Q8IU54 200 aa19.03■□□□□ 0.64
MRPL55-226ENST00000473066 TEX11Q8IYF3 940 aa19.03■□□□□ 0.64
MRPL55-226ENST00000473066 SNCAIPQ9Y6H5 919 aa19.03■□□□□ 0.64
MRPL55-226ENST00000473066 MYH7P12883 1935 aa19.02■□□□□ 0.64
MRPL55-226ENST00000473066 WDHD1O75717 1129 aaPredicted RBP19.02■□□□□ 0.64
MRPL55-226ENST00000473066 IDH1O75874 414 aaKnown RBP19.02■□□□□ 0.64
MRPL55-226ENST00000473066 GTF2A2P52657 109 aa19.02■□□□□ 0.64
MRPL55-226ENST00000473066 SIRT2Q8IXJ6 389 aa19.02■□□□□ 0.64
MRPL55-226ENST00000473066 ZNF384Q8TF68 577 aa19.02■□□□□ 0.64
MRPL55-226ENST00000473066 ZKSCAN4Q969J2 545 aaPredicted RBP19.02■□□□□ 0.64
MRPL55-226ENST00000473066 COL2A1P02458 1487 aaPredicted RBP19.02■□□□□ 0.63
MRPL55-226ENST00000473066 MYH1P12882 1939 aa19.02■□□□□ 0.63
MRPL55-226ENST00000473066 CCL15-CCL14A0A0B4J2E2 113 aa19.01■□□□□ 0.63
MRPL55-226ENST00000473066 RHBDL3P58872 404 aa19.01■□□□□ 0.63
MRPL55-226ENST00000473066 CCL15Q16663 113 aa19.01■□□□□ 0.63
MRPL55-226ENST00000473066 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
MRPL55-226ENST00000473066 ABHD8Q96I13 439 aa19.01■□□□□ 0.63
MRPL55-226ENST00000473066 IGF2BP3O00425 579 aaKnown RBP eCLIP19■□□□□ 0.63
MRPL55-226ENST00000473066 NPM3O75607 178 aaKnown RBP19■□□□□ 0.63
MRPL55-226ENST00000473066 INPP5BP32019 993 aa19■□□□□ 0.63
MRPL55-226ENST00000473066 RRP1P56182 461 aaKnown RBP19■□□□□ 0.63
MRPL55-226ENST00000473066 PPIL2Q13356 520 aa19■□□□□ 0.63
MRPL55-226ENST00000473066 ZFPM1Q8IX07 1006 aa19■□□□□ 0.63
MRPL55-226ENST00000473066 CFHR5Q9BXR6 569 aa19■□□□□ 0.63
MRPL55-226ENST00000473066 MCOLN1Q9GZU1 580 aa19■□□□□ 0.63
MRPL55-226ENST00000473066 DDX4Q9NQI0 724 aaKnown RBP19■□□□□ 0.63
MRPL55-226ENST00000473066 PIH1D3Q9NQM4 214 aaKnown RBP19■□□□□ 0.63
MRPL55-226ENST00000473066 AATFQ9NY61 560 aaKnown RBP eCLIP19■□□□□ 0.63
MRPL55-226ENST00000473066 ATRNL1Q5VV63 1379 aa18.99■□□□□ 0.63
MRPL55-226ENST00000473066 GPR25O00155 361 aa18.99■□□□□ 0.63
MRPL55-226ENST00000473066 MAP3K12Q12852 859 aa18.99■□□□□ 0.63
MRPL55-226ENST00000473066 SNAPC2Q13487 334 aa18.99■□□□□ 0.63
MRPL55-226ENST00000473066 TTF1Q15361 905 aaPredicted RBP18.99■□□□□ 0.63
MRPL55-226ENST00000473066 NOM1Q5C9Z4 860 aaKnown RBP18.99■□□□□ 0.63
MRPL55-226ENST00000473066 CTU1Q7Z7A3 348 aaKnown RBP18.99■□□□□ 0.63
MRPL55-226ENST00000473066 TESPA1A2RU30 521 aaPredicted RBP18.98■□□□□ 0.63
MRPL55-226ENST00000473066 FKTNO75072 461 aa18.98■□□□□ 0.63
MRPL55-226ENST00000473066 CETPP11597 493 aa18.98■□□□□ 0.63
MRPL55-226ENST00000473066 CYP7A1P22680 504 aa18.98■□□□□ 0.63
MRPL55-226ENST00000473066 PPATQ06203 517 aa18.98■□□□□ 0.63
MRPL55-226ENST00000473066 NOL9Q5SY16 702 aaKnown RBP18.98■□□□□ 0.63
MRPL55-226ENST00000473066 CERS3Q8IU89 383 aa18.98■□□□□ 0.63
MRPL55-226ENST00000473066 SH3RF3Q8TEJ3 882 aaPredicted RBP18.98■□□□□ 0.63
MRPL55-226ENST00000473066 ZNF296Q8WUU4 475 aaPredicted RBP18.98■□□□□ 0.63
MRPL55-226ENST00000473066 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
MRPL55-226ENST00000473066 OSBPL5Q9H0X9 879 aaPredicted RBP18.98■□□□□ 0.63
MRPL55-226ENST00000473066 PICK1Q9NRD5 415 aa18.98■□□□□ 0.63
MRPL55-226ENST00000473066 ZNF112Q9UJU3 913 aa18.98■□□□□ 0.63
MRPL55-226ENST00000473066 NAV1Q8NEY1 1877 aa18.98■□□□□ 0.63
MRPL55-226ENST00000473066 PTPRFP10586 1907 aa18.98■□□□□ 0.63
MRPL55-226ENST00000473066 DDTLA6NHG4 134 aaPredicted RBP18.97■□□□□ 0.63
MRPL55-226ENST00000473066 TMED8Q6PL24 325 aaPredicted RBP18.97■□□□□ 0.63
MRPL55-226ENST00000473066 BRI3BPQ8WY22 251 aa18.97■□□□□ 0.63
MRPL55-226ENST00000473066 DNAJC2Q99543 621 aaKnown RBP18.97■□□□□ 0.63
MRPL55-226ENST00000473066 NDUFB9Q9Y6M9 179 aa18.97■□□□□ 0.63
MRPL55-226ENST00000473066 IRF6O14896 467 aa18.96■□□□□ 0.63
MRPL55-226ENST00000473066 PPP4CP60510 307 aa18.96■□□□□ 0.63
MRPL55-226ENST00000473066 TAF1CQ15572 869 aaPredicted RBP18.96■□□□□ 0.63
MRPL55-226ENST00000473066 SH3BP5LQ7L8J4 393 aa18.96■□□□□ 0.63
MRPL55-226ENST00000473066 SCYL3Q8IZE3 742 aa18.96■□□□□ 0.63
MRPL55-226ENST00000473066 MAGEB6Q8N7X4 407 aa18.96■□□□□ 0.63
MRPL55-226ENST00000473066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.96■□□□□ 0.63
MRPL55-226ENST00000473066 MS4A4AQ96JQ5 239 aa18.96■□□□□ 0.63
MRPL55-226ENST00000473066 SIPA1L1O43166 1804 aa18.95■□□□□ 0.62
MRPL55-226ENST00000473066 PHIPQ8WWQ0 1821 aa18.95■□□□□ 0.62
MRPL55-226ENST00000473066 CRHR2Q13324 411 aa18.95■□□□□ 0.62
MRPL55-226ENST00000473066 TRIM34Q9BYJ4 488 aa18.95■□□□□ 0.62
MRPL55-226ENST00000473066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.95■□□□□ 0.62
MRPL55-226ENST00000473066 ADGRA1Q86SQ6 560 aa18.94■□□□□ 0.62
MRPL55-226ENST00000473066 MAPKAPK5Q8IW41 473 aa18.94■□□□□ 0.62
MRPL55-226ENST00000473066 TGFBRAP1Q8WUH2 860 aa18.94■□□□□ 0.62
MRPL55-226ENST00000473066 DHX36Q9H2U1 1008 aaKnown RBP18.94■□□□□ 0.62
MRPL55-226ENST00000473066 ANTXR1Q9H6X2 564 aa18.94■□□□□ 0.62
MRPL55-226ENST00000473066 ZFYVE28Q9HCC9 887 aa18.94■□□□□ 0.62
MRPL55-226ENST00000473066 CCDC85CA6NKD9 419 aa18.93■□□□□ 0.62
MRPL55-226ENST00000473066 GOLIM4O00461 696 aa18.93■□□□□ 0.62
MRPL55-226ENST00000473066 TBC1D12O60347 775 aa18.93■□□□□ 0.62
MRPL55-226ENST00000473066 CTNND1O60716 968 aaKnown RBP18.93■□□□□ 0.62
MRPL55-226ENST00000473066 MIGA1Q8NAN2 632 aa18.93■□□□□ 0.62
MRPL55-226ENST00000473066 ERO1AQ96HE7 468 aa18.93■□□□□ 0.62
MRPL55-226ENST00000473066 GPATCH3Q96I76 525 aa18.93■□□□□ 0.62
MRPL55-226ENST00000473066 PTPN18Q99952 460 aa18.93■□□□□ 0.62
MRPL55-226ENST00000473066 R3HDMLQ9H3Y0 253 aa18.93■□□□□ 0.62
MRPL55-226ENST00000473066 ZCCHC17Q9NP64 241 aaKnown RBP18.93■□□□□ 0.62
MRPL55-226ENST00000473066 HERC5Q9UII4 1024 aaKnown RBP18.93■□□□□ 0.62
MRPL55-226ENST00000473066 FLT1P17948 1338 aa18.93■□□□□ 0.62
MRPL55-226ENST00000473066 MYH8P13535 1937 aa18.92■□□□□ 0.62
MRPL55-226ENST00000473066 PHF20L1A8MW92 1017 aa18.92■□□□□ 0.62
MRPL55-226ENST00000473066 HLA-DOAP06340 250 aa18.92■□□□□ 0.62
MRPL55-226ENST00000473066 USP5P45974 858 aa18.92■□□□□ 0.62
MRPL55-226ENST00000473066 DYNLL1P63167 89 aaKnown RBP18.92■□□□□ 0.62
MRPL55-226ENST00000473066 MAP3K10Q02779 954 aa18.92■□□□□ 0.62
MRPL55-226ENST00000473066 PKN2Q16513 984 aaKnown RBP18.92■□□□□ 0.62
MRPL55-226ENST00000473066 CRACR2BQ8N4Y2 399 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms