RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 KCNK17Q96T54 332 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 DEFB129Q9H1M3 183 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 PRO3102Q9H379 93 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 TMEM134Q9H6X4 195 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 PHAXQ9H814 394 aaKnown RBP7.95□□□□□ -1.14
HDAC1-205ENST00000472928 DBF4Q9UBU7 674 aaPredicted RBP7.95□□□□□ -1.14
HDAC1-205ENST00000472928 PNMA3Q9UL41 463 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 MYO3BQ8WXR4 1341 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 PCCAP05165 728 aaPredicted RBP7.94□□□□□ -1.14
HDAC1-205ENST00000472928 KLRK1P26718 216 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 MMP14P50281 582 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 AAMPQ13685 434 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 PROX2Q3B8N5 592 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 SLC4A10Q6U841 1118 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 ANKRD18AQ8IVF6 992 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 HOMEZQ8IX15 550 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 SHISA4Q96DD7 197 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 COA1Q9GZY4 146 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 HYPKQ9NX55 129 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 MINPP1Q9UNW1 487 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 PCDHAC2Q9Y5I4 1007 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 AOX1Q06278 1338 aa7.94□□□□□ -1.14
HDAC1-205ENST00000472928 UNCXA6NJT0 531 aa7.93□□□□□ -1.14
HDAC1-205ENST00000472928 PDE8AO60658 829 aa7.93□□□□□ -1.14
HDAC1-205ENST00000472928 CCT4P50991 539 aaKnown RBP7.93□□□□□ -1.14
HDAC1-205ENST00000472928 SLC9C1Q4G0N8 1177 aa7.93□□□□□ -1.14
HDAC1-205ENST00000472928 KIAA0825Q8IV33 1275 aa7.93□□□□□ -1.14
HDAC1-205ENST00000472928 SLC17A8Q8NDX2 589 aa7.93□□□□□ -1.14
HDAC1-205ENST00000472928 SPIRE2Q8WWL2 714 aa7.93□□□□□ -1.14
HDAC1-205ENST00000472928 DDX11L8A8MPP1 907 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 PPP1R12BO60237 982 aaPredicted RBP7.92□□□□□ -1.14
HDAC1-205ENST00000472928 USP2O75604 605 aaPredicted RBP7.92□□□□□ -1.14
HDAC1-205ENST00000472928 DDX58O95786 925 aaKnown RBP7.92□□□□□ -1.14
HDAC1-205ENST00000472928 MYCP01106 439 aaPredicted RBP7.92□□□□□ -1.14
HDAC1-205ENST00000472928 HSP90B1P14625 803 aaKnown RBP7.92□□□□□ -1.14
HDAC1-205ENST00000472928 SLC4A8Q2Y0W8 1093 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 NBPF12Q5TAG4 269 aaPredicted RBP7.92□□□□□ -1.14
HDAC1-205ENST00000472928 TTLL5Q6EMB2 1281 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 OTUD7BQ6GQQ9 843 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 CERS5Q8N5B7 392 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 MTMR14Q8NCE2 650 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 CCDC191Q8NCU4 936 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 SH3TC2Q8TF17 1288 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 DNAAF4Q8WXU2 420 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 BRI3BPQ8WY22 251 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 MYD88Q99836 296 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 CHMP4BQ9H444 224 aaKnown RBP7.92□□□□□ -1.14
HDAC1-205ENST00000472928 GREM2Q9H772 168 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 C1orf115Q9H7X2 142 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 BSDC1Q9NW68 430 aaPredicted RBP7.92□□□□□ -1.14
HDAC1-205ENST00000472928 LIMD1Q9UGP4 676 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 PPP2R3BQ9Y5P8 575 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 ZNF804BA4D1E1 1349 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 SPEF2Q9C093 1822 aa7.92□□□□□ -1.14
HDAC1-205ENST00000472928 UNC80Q8N2C7 3258 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 PI4KAP2A4QPH2 592 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 A6NJR5 290 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 SMAPO00193 183 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 IREB2P48200 963 aaKnown RBP7.91□□□□□ -1.14
HDAC1-205ENST00000472928 CTSWP56202 376 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 GTF2IP78347 998 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 CENPQQ7L2Z9 268 aaPredicted RBP7.91□□□□□ -1.14
HDAC1-205ENST00000472928 RIC3Q7Z5B4 369 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 UBE2Q1Q7Z7E8 422 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 NBPF11Q86T75 865 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 PI4KAP1Q8N8J0 262 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 TTLL11Q8NHH1 800 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 CDC5LQ99459 802 aaKnown RBP7.91□□□□□ -1.14
HDAC1-205ENST00000472928 MEIS3Q99687 375 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 ZBED2Q9BTP6 218 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 ARHGAP39Q9C0H5 1083 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 ZBTB40Q9NUA8 1239 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 CWC25Q9NXE8 425 aaPredicted RBP7.91□□□□□ -1.14
HDAC1-205ENST00000472928 MAP3K2Q9Y2U5 619 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 PCDHB15Q9Y5E8 787 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 IRS2Q9Y4H2 1338 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 AK9Q5TCS8 1911 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 OTOFQ9HC10 1997 aa7.91□□□□□ -1.14
HDAC1-205ENST00000472928 ZSWIM8A7E2V4 1837 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 CLRN2A0PK11 232 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 SOX1O00570 391 aaPredicted RBP7.9□□□□□ -1.14
HDAC1-205ENST00000472928 DLGAP5Q15398 846 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 TAF1CQ15572 869 aaPredicted RBP7.9□□□□□ -1.14
HDAC1-205ENST00000472928 SUPT20HL1Q3ZLR7 823 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 CFAP100Q494V2 611 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 KSR2Q6VAB6 950 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 CDAN1Q8IWY9 1227 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 ANKRD13AQ8IZ07 590 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 FAM43AQ8N2R8 423 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 OPTNQ96CV9 577 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 METTL22Q9BUU2 404 aaPredicted RBP7.9□□□□□ -1.14
HDAC1-205ENST00000472928 SRCIN1Q9C0H9 1055 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 ELP3Q9H9T3 547 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 LEMD3Q9Y2U8 911 aa7.9□□□□□ -1.14
HDAC1-205ENST00000472928 CCL15-CCL14A0A0B4J2E2 113 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 ZBTB7BO15156 539 aaPredicted RBP7.89□□□□□ -1.15
HDAC1-205ENST00000472928 SPTLC1O15269 473 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 IGKV5-2P06315 115 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 RFC5P40937 340 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 RASA3Q14644 834 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms