RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 KIF4BQ2VIQ3 1234 aa4.3□□□□□ -1.72
VPS45-206ENST00000472756 SMYD4Q8IYR2 804 aaPredicted RBP4.3□□□□□ -1.72
VPS45-206ENST00000472756 KIRREL1Q96J84 757 aa4.3□□□□□ -1.72
VPS45-206ENST00000472756 CORO1BQ9BR76 489 aa4.3□□□□□ -1.72
VPS45-206ENST00000472756 PARD6AQ9NPB6 346 aa4.3□□□□□ -1.72
VPS45-206ENST00000472756 A0A1W2PP55 124 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 FOXD2O60548 495 aaPredicted RBP4.29□□□□□ -1.72
VPS45-206ENST00000472756 PCSK2P16519 638 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 NPR3P17342 541 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 GDNFP39905 211 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 NFKB2Q00653 900 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 C8orf34Q49A92 452 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 TPRNQ4KMQ1 711 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 NOM1Q5C9Z4 860 aaKnown RBP4.29□□□□□ -1.72
VPS45-206ENST00000472756 ATG14Q6ZNE5 492 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 CYFIP1Q7L576 1253 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 HELQQ8TDG4 1101 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 ATXN3LQ9H3M9 355 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 ZFYVE28Q9HCC9 887 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 AMOTL2Q9Y2J4 779 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 MYO15BQ96JP2 1530 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 ADAMTS20P59510 1910 aa4.29□□□□□ -1.72
VPS45-206ENST00000472756 ETV2O00321 342 aaPredicted RBP4.28□□□□□ -1.72
VPS45-206ENST00000472756 ZNF862O60290 1169 aa4.28□□□□□ -1.72
VPS45-206ENST00000472756 NEFMP07197 916 aa4.28□□□□□ -1.72
VPS45-206ENST00000472756 EIF1AXP47813 144 aaKnown RBP4.28□□□□□ -1.72
VPS45-206ENST00000472756 IKZF1Q13422 519 aa4.28□□□□□ -1.72
VPS45-206ENST00000472756 TMEM67Q5HYA8 995 aa4.28□□□□□ -1.72
VPS45-206ENST00000472756 GGNQ86UU5 652 aa4.28□□□□□ -1.72
VPS45-206ENST00000472756 ZNF576Q9H609 170 aa4.28□□□□□ -1.72
VPS45-206ENST00000472756 CCDC86Q9H6F5 360 aaKnown RBP4.28□□□□□ -1.72
VPS45-206ENST00000472756 KCNK12Q9HB15 430 aa4.28□□□□□ -1.72
VPS45-206ENST00000472756 PCOLCE2Q9UKZ9 415 aa4.28□□□□□ -1.72
VPS45-206ENST00000472756 SMG5Q9UPR3 1016 aaKnown RBP4.28□□□□□ -1.72
VPS45-206ENST00000472756 TMEM253P0C7T8 217 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 LIG1P18858 919 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 LINC00310P59036 64 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 ID3Q02535 119 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 AP3B2Q13367 1082 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 TTLL4Q14679 1199 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 TMEM164Q5U3C3 297 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 CIAPIN1Q6FI81 312 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 MPZL3Q6UWV2 235 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 GALNT12Q8IXK2 581 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 KCNC2Q96PR1 638 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 NSUN3Q9H649 340 aaKnown RBP4.27□□□□□ -1.73
VPS45-206ENST00000472756 KRT82Q9NSB4 513 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 POLIQ9UNA4 740 aa4.27□□□□□ -1.73
VPS45-206ENST00000472756 ATG7O95352 703 aa4.26□□□□□ -1.73
VPS45-206ENST00000472756 CLCN7P51798 805 aa4.26□□□□□ -1.73
VPS45-206ENST00000472756 PTPN12Q05209 780 aaKnown RBP4.26□□□□□ -1.73
VPS45-206ENST00000472756 KIAA0319Q5VV43 1072 aa4.26□□□□□ -1.73
VPS45-206ENST00000472756 SEMA3GQ9NS98 782 aa4.26□□□□□ -1.73
VPS45-206ENST00000472756 SUPT5HO00267 1087 aaKnown RBP4.25□□□□□ -1.73
VPS45-206ENST00000472756 ITIH2P19823 946 aa4.25□□□□□ -1.73
VPS45-206ENST00000472756 EHHADHQ08426 723 aa4.25□□□□□ -1.73
VPS45-206ENST00000472756 TOP6BLQ8N6T0 577 aa4.25□□□□□ -1.73
VPS45-206ENST00000472756 ISL2Q96A47 359 aa4.25□□□□□ -1.73
VPS45-206ENST00000472756 DIRC2Q96SL1 478 aa4.25□□□□□ -1.73
VPS45-206ENST00000472756 LIN7BQ9HAP6 207 aa4.25□□□□□ -1.73
VPS45-206ENST00000472756 PIDD1Q9HB75 910 aa4.25□□□□□ -1.73
VPS45-206ENST00000472756 FZD6O60353 706 aa4.24□□□□□ -1.73
VPS45-206ENST00000472756 POLR3DP05423 398 aaPredicted RBP4.24□□□□□ -1.73
VPS45-206ENST00000472756 SLFN14P0C7P3 912 aa4.24□□□□□ -1.73
VPS45-206ENST00000472756 HCLS1P14317 486 aaPredicted RBP4.24□□□□□ -1.73
VPS45-206ENST00000472756 MPSTP25325 297 aa4.24□□□□□ -1.73
VPS45-206ENST00000472756 NTF4P34130 210 aa4.24□□□□□ -1.73
VPS45-206ENST00000472756 PDE3AQ14432 1141 aa4.24□□□□□ -1.73
VPS45-206ENST00000472756 SKOR2Q2VWA4 1001 aaPredicted RBP4.24□□□□□ -1.73
VPS45-206ENST00000472756 RPS26P11Q5JNZ5 115 aaPredicted RBP4.24□□□□□ -1.73
VPS45-206ENST00000472756 PDZD3Q86UT5 571 aa4.24□□□□□ -1.73
VPS45-206ENST00000472756 GJD3Q8N144 294 aa4.24□□□□□ -1.73
VPS45-206ENST00000472756 DDX54Q8TDD1 881 aaKnown RBP4.24□□□□□ -1.73
VPS45-206ENST00000472756 RTEL1Q9NZ71 1219 aa4.24□□□□□ -1.73
VPS45-206ENST00000472756 NACADO15069 1562 aa4.23□□□□□ -1.73
VPS45-206ENST00000472756 TCAF2A6NFQ2 919 aa4.23□□□□□ -1.73
VPS45-206ENST00000472756 EOMESO95936 686 aa4.23□□□□□ -1.73
VPS45-206ENST00000472756 USP5P45974 858 aa4.23□□□□□ -1.73
VPS45-206ENST00000472756 ZC3H12AQ5D1E8 599 aaKnown RBP4.23□□□□□ -1.73
VPS45-206ENST00000472756 CXorf38Q8TB03 319 aa4.23□□□□□ -1.73
VPS45-206ENST00000472756 EPB41L4BQ9H329 900 aa4.23□□□□□ -1.73
VPS45-206ENST00000472756 DCP1AQ9NPI6 582 aaPredicted RBP4.23□□□□□ -1.73
VPS45-206ENST00000472756 CACNA2D2Q9NY47 1150 aa4.23□□□□□ -1.73
VPS45-206ENST00000472756 GTF2IRD1Q9UHL9 959 aa4.23□□□□□ -1.73
VPS45-206ENST00000472756 SCRIBQ14160 1630 aa4.22□□□□□ -1.73
VPS45-206ENST00000472756 NUAK1O60285 661 aa4.22□□□□□ -1.73
VPS45-206ENST00000472756 SYN1P17600 705 aa4.22□□□□□ -1.73
VPS45-206ENST00000472756 ERVK-24P63145 666 aa4.22□□□□□ -1.73
VPS45-206ENST00000472756 FAAP100Q0VG06 881 aa4.22□□□□□ -1.73
VPS45-206ENST00000472756 ALKBH2Q6NS38 261 aa4.22□□□□□ -1.73
VPS45-206ENST00000472756 ARHGAP27Q6ZUM4 889 aa4.22□□□□□ -1.73
VPS45-206ENST00000472756 C22orf34Q6ZV56 151 aa4.22□□□□□ -1.73
VPS45-206ENST00000472756 MARCH10Q8NA82 808 aaPredicted RBP4.22□□□□□ -1.73
VPS45-206ENST00000472756 RNF214Q8ND24 703 aa4.22□□□□□ -1.73
VPS45-206ENST00000472756 SLC26A8Q96RN1 970 aa4.22□□□□□ -1.73
VPS45-206ENST00000472756 CARS2Q9HA77 564 aaKnown RBP4.22□□□□□ -1.73
VPS45-206ENST00000472756 GSTP1P09211 210 aaKnown RBP4.21□□□□□ -1.74
VPS45-206ENST00000472756 KRTAP1-1Q07627 177 aa4.21□□□□□ -1.74
VPS45-206ENST00000472756 NPAS4Q8IUM7 802 aa4.21□□□□□ -1.74
VPS45-206ENST00000472756 TTC16Q8NEE8 873 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms