RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 FKTNO75072 461 aa23.72■■□□□ 1.39
COMMD1-208ENST00000472729 CETPP11597 493 aa23.72■■□□□ 1.39
COMMD1-208ENST00000472729 GJA5P36382 358 aa23.72■■□□□ 1.39
COMMD1-208ENST00000472729 SNAPC2Q13487 334 aa23.72■■□□□ 1.39
COMMD1-208ENST00000472729 C20orf194Q5TEA3 1177 aa23.72■■□□□ 1.39
COMMD1-208ENST00000472729 TEX11Q8IYF3 940 aa23.72■■□□□ 1.39
COMMD1-208ENST00000472729 CNKSR2Q8WXI2 1034 aa23.72■■□□□ 1.39
COMMD1-208ENST00000472729 PICK1Q9NRD5 415 aa23.72■■□□□ 1.39
COMMD1-208ENST00000472729 SNCAIPQ9Y6H5 919 aa23.72■■□□□ 1.39
COMMD1-208ENST00000472729 IDH1O75874 414 aaKnown RBP23.71■■□□□ 1.39
COMMD1-208ENST00000472729 CYP2E1P05181 493 aaPredicted RBP23.71■■□□□ 1.39
COMMD1-208ENST00000472729 NOM1Q5C9Z4 860 aaKnown RBP23.71■■□□□ 1.39
COMMD1-208ENST00000472729 ZFPM1Q8IX07 1006 aa23.71■■□□□ 1.39
COMMD1-208ENST00000472729 CFHR5Q9BXR6 569 aa23.71■■□□□ 1.39
COMMD1-208ENST00000472729 IGF2BP3O00425 579 aaKnown RBP eCLIP23.7■■□□□ 1.38
COMMD1-208ENST00000472729 PPATQ06203 517 aa23.7■■□□□ 1.38
COMMD1-208ENST00000472729 MAP3K12Q12852 859 aa23.7■■□□□ 1.38
COMMD1-208ENST00000472729 AATFQ9NY61 560 aaKnown RBP eCLIP23.7■■□□□ 1.38
COMMD1-208ENST00000472729 TESPA1A2RU30 521 aaPredicted RBP23.69■■□□□ 1.38
COMMD1-208ENST00000472729 NPM3O75607 178 aaKnown RBP23.69■■□□□ 1.38
COMMD1-208ENST00000472729 INPP5BP32019 993 aa23.69■■□□□ 1.38
COMMD1-208ENST00000472729 PPIL2Q13356 520 aa23.69■■□□□ 1.38
COMMD1-208ENST00000472729 TTF1Q15361 905 aaPredicted RBP23.69■■□□□ 1.38
COMMD1-208ENST00000472729 PKN2Q16513 984 aaKnown RBP23.69■■□□□ 1.38
COMMD1-208ENST00000472729 IRF6O14896 467 aa23.68■■□□□ 1.38
COMMD1-208ENST00000472729 CYP7A1P22680 504 aa23.68■■□□□ 1.38
COMMD1-208ENST00000472729 RHBDL3P58872 404 aa23.68■■□□□ 1.38
COMMD1-208ENST00000472729 MS4A4AQ96JQ5 239 aa23.68■■□□□ 1.38
COMMD1-208ENST00000472729 TRIM34Q9BYJ4 488 aa23.68■■□□□ 1.38
COMMD1-208ENST00000472729 ZFYVE28Q9HCC9 887 aa23.68■■□□□ 1.38
COMMD1-208ENST00000472729 ZNF112Q9UJU3 913 aa23.68■■□□□ 1.38
COMMD1-208ENST00000472729 TAF1CQ15572 869 aaPredicted RBP23.67■■□□□ 1.38
COMMD1-208ENST00000472729 CERS3Q8IU89 383 aa23.67■■□□□ 1.38
COMMD1-208ENST00000472729 SIRT2Q8IXJ6 389 aa23.67■■□□□ 1.38
COMMD1-208ENST00000472729 ZNF384Q8TF68 577 aa23.67■■□□□ 1.38
COMMD1-208ENST00000472729 BRI3BPQ8WY22 251 aa23.67■■□□□ 1.38
COMMD1-208ENST00000472729 DDX4Q9NQI0 724 aaKnown RBP23.67■■□□□ 1.38
COMMD1-208ENST00000472729 PIH1D3Q9NQM4 214 aaKnown RBP23.67■■□□□ 1.38
COMMD1-208ENST00000472729 MYH13Q9UKX3 1938 aa23.67■■□□□ 1.38
COMMD1-208ENST00000472729 DDTLA6NHG4 134 aaPredicted RBP23.66■■□□□ 1.38
COMMD1-208ENST00000472729 CRHR2Q13324 411 aa23.66■■□□□ 1.38
COMMD1-208ENST00000472729 TMED8Q6PL24 325 aaPredicted RBP23.66■■□□□ 1.38
COMMD1-208ENST00000472729 SH3RF3Q8TEJ3 882 aaPredicted RBP23.66■■□□□ 1.38
COMMD1-208ENST00000472729 PTPN18Q99952 460 aa23.66■■□□□ 1.38
COMMD1-208ENST00000472729 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.66■■□□□ 1.38
COMMD1-208ENST00000472729 ARHGEF6Q15052 776 aa23.65■■□□□ 1.38
COMMD1-208ENST00000472729 NOL9Q5SY16 702 aaKnown RBP23.65■■□□□ 1.38
COMMD1-208ENST00000472729 SCYL3Q8IZE3 742 aa23.65■■□□□ 1.38
COMMD1-208ENST00000472729 LRRCC1Q9C099 1032 aa23.65■■□□□ 1.38
COMMD1-208ENST00000472729 OSBPL5Q9H0X9 879 aaPredicted RBP23.65■■□□□ 1.38
COMMD1-208ENST00000472729 DHX36Q9H2U1 1008 aaKnown RBP23.65■■□□□ 1.38
COMMD1-208ENST00000472729 PPP4CP60510 307 aa23.64■■□□□ 1.37
COMMD1-208ENST00000472729 SH3BP5LQ7L8J4 393 aa23.64■■□□□ 1.37
COMMD1-208ENST00000472729 MAGEB6Q8N7X4 407 aa23.64■■□□□ 1.37
COMMD1-208ENST00000472729 ERO1AQ96HE7 468 aa23.64■■□□□ 1.37
COMMD1-208ENST00000472729 DNAJC2Q99543 621 aaKnown RBP23.64■■□□□ 1.37
COMMD1-208ENST00000472729 R3HDMLQ9H3Y0 253 aa23.64■■□□□ 1.37
COMMD1-208ENST00000472729 ZHX2Q9Y6X8 837 aa23.64■■□□□ 1.37
COMMD1-208ENST00000472729 CTNND1O60716 968 aaKnown RBP23.63■■□□□ 1.37
COMMD1-208ENST00000472729 TGFBRAP1Q8WUH2 860 aa23.63■■□□□ 1.37
COMMD1-208ENST00000472729 NDUFB9Q9Y6M9 179 aa23.63■■□□□ 1.37
COMMD1-208ENST00000472729 TBC1D12O60347 775 aa23.62■■□□□ 1.37
COMMD1-208ENST00000472729 USP5P45974 858 aa23.62■■□□□ 1.37
COMMD1-208ENST00000472729 SP3Q02447 781 aa23.62■■□□□ 1.37
COMMD1-208ENST00000472729 MAPKAPK5Q8IW41 473 aa23.62■■□□□ 1.37
COMMD1-208ENST00000472729 CRACR2BQ8N4Y2 399 aaPredicted RBP23.62■■□□□ 1.37
COMMD1-208ENST00000472729 ZCCHC17Q9NP64 241 aaKnown RBP23.62■■□□□ 1.37
COMMD1-208ENST00000472729 PI4KBQ9UBF8 816 aa23.62■■□□□ 1.37
COMMD1-208ENST00000472729 AKAP11Q9UKA4 1901 aa23.62■■□□□ 1.37
COMMD1-208ENST00000472729 PHF20L1A8MW92 1017 aa23.61■■□□□ 1.37
COMMD1-208ENST00000472729 HLA-DOAP06340 250 aa23.61■■□□□ 1.37
COMMD1-208ENST00000472729 FAM43AQ8N2R8 423 aa23.61■■□□□ 1.37
COMMD1-208ENST00000472729 MIGA1Q8NAN2 632 aa23.61■■□□□ 1.37
COMMD1-208ENST00000472729 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.61■■□□□ 1.37
COMMD1-208ENST00000472729 HERC5Q9UII4 1024 aaKnown RBP23.61■■□□□ 1.37
COMMD1-208ENST00000472729 RFX7Q2KHR2 1363 aa23.61■■□□□ 1.37
COMMD1-208ENST00000472729 BTBD19C9JJ37 291 aa23.6■■□□□ 1.37
COMMD1-208ENST00000472729 GOLIM4O00461 696 aa23.6■■□□□ 1.37
COMMD1-208ENST00000472729 CXCL11O14625 94 aa23.6■■□□□ 1.37
COMMD1-208ENST00000472729 MAP3K10Q02779 954 aa23.6■■□□□ 1.37
COMMD1-208ENST00000472729 KIF22Q14807 665 aa23.6■■□□□ 1.37
COMMD1-208ENST00000472729 FASTKD5Q7L8L6 764 aaKnown RBP23.6■■□□□ 1.37
COMMD1-208ENST00000472729 ANTXR1Q9H6X2 564 aa23.6■■□□□ 1.37
COMMD1-208ENST00000472729 TRIM17Q9Y577 477 aa23.6■■□□□ 1.37
COMMD1-208ENST00000472729 ATRNL1Q5VV63 1379 aa23.6■■□□□ 1.37
COMMD1-208ENST00000472729 PTPRAP18433 802 aa23.59■■□□□ 1.37
COMMD1-208ENST00000472729 RRP1P56182 461 aaKnown RBP23.59■■□□□ 1.37
COMMD1-208ENST00000472729 SLC9C2Q5TAH2 1124 aa23.59■■□□□ 1.37
COMMD1-208ENST00000472729 ADGRA1Q86SQ6 560 aa23.59■■□□□ 1.37
COMMD1-208ENST00000472729 GPATCH3Q96I76 525 aa23.59■■□□□ 1.37
COMMD1-208ENST00000472729 ZBTB47Q9UFB7 747 aaPredicted RBP23.59■■□□□ 1.37
COMMD1-208ENST00000472729 KCNH4Q9UQ05 1017 aa23.59■■□□□ 1.37
COMMD1-208ENST00000472729 FBXO46Q6PJ61 603 aaPredicted RBP23.58■■□□□ 1.37
COMMD1-208ENST00000472729 ANKRD23Q86SG2 305 aa23.58■■□□□ 1.37
COMMD1-208ENST00000472729 FOXP4Q8IVH2 680 aaPredicted RBP23.58■■□□□ 1.37
COMMD1-208ENST00000472729 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.58■■□□□ 1.37
COMMD1-208ENST00000472729 CASP8AP2Q9UKL3 1982 aa23.58■■□□□ 1.36
COMMD1-208ENST00000472729 PDHXO00330 501 aa23.57■■□□□ 1.36
COMMD1-208ENST00000472729 DYNLL1P63167 89 aaKnown RBP23.57■■□□□ 1.36
COMMD1-208ENST00000472729 BOLA2Q9H3K6 86 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms