RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 RNPC3Q96LT9 517 aaKnown RBP7.51□□□□□ -1.21
SIK3-208ENST00000472648 NECAB3Q96P71 396 aaPredicted RBP7.51□□□□□ -1.21
SIK3-208ENST00000472648 P2RX7Q99572 595 aaKnown RBP7.51□□□□□ -1.21
SIK3-208ENST00000472648 PRDM5Q9NQX1 630 aaPredicted RBP7.51□□□□□ -1.21
SIK3-208ENST00000472648 PICK1Q9NRD5 415 aa7.51□□□□□ -1.21
SIK3-208ENST00000472648 ZNF112Q9UJU3 913 aa7.51□□□□□ -1.21
SIK3-208ENST00000472648 CHD9Q3L8U1 2897 aa7.51□□□□□ -1.21
SIK3-208ENST00000472648 TRANK1O15050 2925 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 ANKRD18BA2A2Z9 1011 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 CHL1O00533 1208 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 ZKSCAN1P17029 563 aaPredicted RBP7.5□□□□□ -1.21
SIK3-208ENST00000472648 CYP2B6P20813 491 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 DNAJB2P25686 324 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 MRE11P49959 708 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 RTP1P59025 263 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 HDLBPQ00341 1268 aaKnown RBP7.5□□□□□ -1.21
SIK3-208ENST00000472648 NEXNQ0ZGT2 675 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 PDE3AQ14432 1141 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 DUSP27Q5VZP5 1158 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 UBE3BQ7Z3V4 1068 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 TSPYL2Q9H2G4 693 aaPredicted RBP7.5□□□□□ -1.21
SIK3-208ENST00000472648 ATP11BQ9Y2G3 1177 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 ZHX2Q9Y6X8 837 aa7.5□□□□□ -1.21
SIK3-208ENST00000472648 PLIN1O60240 522 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 GCLCP48506 637 aaPredicted RBP7.49□□□□□ -1.21
SIK3-208ENST00000472648 AKNAD1Q5T1N1 836 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 POTEEQ6S8J3 1075 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 TRMT44Q8IYL2 757 aaKnown RBP7.49□□□□□ -1.21
SIK3-208ENST00000472648 TDRD7Q8NHU6 1098 aaKnown RBP7.49□□□□□ -1.21
SIK3-208ENST00000472648 SOCS4Q8WXH5 440 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 BADQ92934 168 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 ZDHHC15Q96MV8 337 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 ZNF576Q9H609 170 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 GJD2Q9UKL4 321 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 AGTPBP1Q9UPW5 1226 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 MAP3K2Q9Y2U5 619 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 CHD7Q9P2D1 2997 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 MAST3O60307 1309 aa7.49□□□□□ -1.21
SIK3-208ENST00000472648 ZNFX1Q9P2E3 1918 aaKnown RBP7.48□□□□□ -1.21
SIK3-208ENST00000472648 TRIM75PA6NK02 468 aa7.48□□□□□ -1.21
SIK3-208ENST00000472648 IGKV5-2P06315 115 aa7.48□□□□□ -1.21
SIK3-208ENST00000472648 CCND3P30281 292 aaPredicted RBP7.48□□□□□ -1.21
SIK3-208ENST00000472648 HIBADHP31937 336 aaKnown RBP7.48□□□□□ -1.21
SIK3-208ENST00000472648 TMPOP42166 694 aaKnown RBP7.48□□□□□ -1.21
SIK3-208ENST00000472648 CACNB2Q08289 660 aaPredicted RBP7.48□□□□□ -1.21
SIK3-208ENST00000472648 TCP10Q12799 353 aa7.48□□□□□ -1.21
SIK3-208ENST00000472648 CHAF1AQ13111 956 aaPredicted RBP7.48□□□□□ -1.21
SIK3-208ENST00000472648 CCDC85BQ15834 202 aaPredicted RBP7.48□□□□□ -1.21
SIK3-208ENST00000472648 AAK1Q2M2I8 961 aa7.48□□□□□ -1.21
SIK3-208ENST00000472648 LHX8Q68G74 356 aa7.48□□□□□ -1.21
SIK3-208ENST00000472648 SCYL3Q8IZE3 742 aa7.48□□□□□ -1.21
SIK3-208ENST00000472648 FAM151AQ8WW52 585 aa7.48□□□□□ -1.21
SIK3-208ENST00000472648 TIFAQ96CG3 184 aa7.48□□□□□ -1.21
SIK3-208ENST00000472648 NUDT12Q9BQG2 462 aa7.48□□□□□ -1.21
SIK3-208ENST00000472648 AFG3L2Q9Y4W6 797 aa7.48□□□□□ -1.21
SIK3-208ENST00000472648 SMCHD1A6NHR9 2005 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 A0A0G2JMZ2 1700 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 DNM1LO00429 736 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 FRAT2O75474 233 aaPredicted RBP7.47□□□□□ -1.21
SIK3-208ENST00000472648 XRCC5P13010 732 aaKnown RBP7.47□□□□□ -1.21
SIK3-208ENST00000472648 PTPRAP18433 802 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 IGFBP4P22692 258 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 GYG1P46976 350 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 PABPC4Q13310 644 aaKnown RBP eCLIP7.47□□□□□ -1.21
SIK3-208ENST00000472648 IFIT5Q13325 482 aaKnown RBP7.47□□□□□ -1.21
SIK3-208ENST00000472648 NEUROD2Q15784 382 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 CWF19L2Q2TBE0 894 aaKnown RBP7.47□□□□□ -1.21
SIK3-208ENST00000472648 VPS37DQ86XT2 251 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 TBC1D22AQ8WUA7 517 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 PLA2G12BQ9BX93 195 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 PRDM12Q9H4Q4 367 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 EPHX3Q9H6B9 360 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 CHMP3Q9Y3E7 222 aa7.47□□□□□ -1.21
SIK3-208ENST00000472648 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.46□□□□□ -1.22
SIK3-208ENST00000472648 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.46□□□□□ -1.22
SIK3-208ENST00000472648 CSF1RP07333 972 aa7.46□□□□□ -1.22
SIK3-208ENST00000472648 GRIK5Q16478 980 aa7.46□□□□□ -1.22
SIK3-208ENST00000472648 TAF7LQ5H9L4 462 aa7.46□□□□□ -1.22
SIK3-208ENST00000472648 TREML2Q5T2D2 321 aa7.46□□□□□ -1.22
SIK3-208ENST00000472648 APOBEC3HQ6NTF7 200 aaKnown RBP7.46□□□□□ -1.22
SIK3-208ENST00000472648 KSR2Q6VAB6 950 aa7.46□□□□□ -1.22
SIK3-208ENST00000472648 CCAR1Q8IX12 1150 aaKnown RBP7.46□□□□□ -1.22
SIK3-208ENST00000472648 PROCA1Q8NCQ7 364 aaPredicted RBP7.46□□□□□ -1.22
SIK3-208ENST00000472648 CNNM1Q9NRU3 951 aa7.46□□□□□ -1.22
SIK3-208ENST00000472648 CXXC1Q9P0U4 656 aaPredicted RBP7.46□□□□□ -1.22
SIK3-208ENST00000472648 IQSEC3Q9UPP2 1182 aaPredicted RBP7.46□□□□□ -1.22
SIK3-208ENST00000472648 LRRFIP2Q9Y608 721 aaKnown RBP7.46□□□□□ -1.22
SIK3-208ENST00000472648 PI4KAP2A4QPH2 592 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 FAM86C2PA6NEL3 165 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 KBTBD13C9JR72 458 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 H7C1W4 665 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 MSCO60682 206 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 GPR37L1O60883 481 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 BMP1P13497 986 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 CNGA1P29973 690 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 RGS2P41220 211 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 UBE4AQ14139 1066 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 TRIM60Q495X7 471 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 HHIPL2Q6UWX4 724 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms