RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 HELLSQ9NRZ9 838 aa15.48■□□□□ 0.07
SEC16A-209ENST00000472305 PITPNM2Q9BZ72 1349 aa15.47■□□□□ 0.07
SEC16A-209ENST00000472305 ITGBL1O95965 494 aaPredicted RBP15.47■□□□□ 0.07
SEC16A-209ENST00000472305 EVX2Q03828 476 aa15.47■□□□□ 0.07
SEC16A-209ENST00000472305 MCMDC2Q4G0Z9 681 aa15.47■□□□□ 0.07
SEC16A-209ENST00000472305 VPS53Q5VIR6 699 aa15.47■□□□□ 0.07
SEC16A-209ENST00000472305 CDC37L1Q7L3B6 337 aa15.47■□□□□ 0.07
SEC16A-209ENST00000472305 DEFB129Q9H1M3 183 aa15.47■□□□□ 0.07
SEC16A-209ENST00000472305 DIAPH3Q9NSV4 1193 aa15.47■□□□□ 0.07
SEC16A-209ENST00000472305 TMOD2Q9NZR1 351 aa15.47■□□□□ 0.07
SEC16A-209ENST00000472305 SLC4A4Q9Y6R1 1079 aa15.47■□□□□ 0.07
SEC16A-209ENST00000472305 DDTLA6NHG4 134 aaPredicted RBP15.46■□□□□ 0.07
SEC16A-209ENST00000472305 FOXP2O15409 715 aa15.46■□□□□ 0.07
SEC16A-209ENST00000472305 SLC4A8Q2Y0W8 1093 aa15.46■□□□□ 0.07
SEC16A-209ENST00000472305 NBPF12Q5TAG4 269 aaPredicted RBP15.46■□□□□ 0.07
SEC16A-209ENST00000472305 APOBEC3FQ8IUX4 373 aaKnown RBP15.46■□□□□ 0.07
SEC16A-209ENST00000472305 SULF1Q8IWU6 871 aa15.46■□□□□ 0.07
SEC16A-209ENST00000472305 FAM151AQ8WW52 585 aa15.46■□□□□ 0.07
SEC16A-209ENST00000472305 TEPSINQ96N21 525 aa15.46■□□□□ 0.07
SEC16A-209ENST00000472305 FLT1P17948 1338 aa15.45■□□□□ 0.06
SEC16A-209ENST00000472305 GSG1L2A8MUP6 293 aa15.45■□□□□ 0.06
SEC16A-209ENST00000472305 SMIM22K7EJ46 135 aa15.45■□□□□ 0.06
SEC16A-209ENST00000472305 PLCG2P16885 1265 aa15.45■□□□□ 0.06
SEC16A-209ENST00000472305 USP5P45974 858 aa15.45■□□□□ 0.06
SEC16A-209ENST00000472305 TICAM2Q86XR7 235 aa15.45■□□□□ 0.06
SEC16A-209ENST00000472305 CDCA5Q96FF9 252 aa15.45■□□□□ 0.06
SEC16A-209ENST00000472305 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
SEC16A-209ENST00000472305 OSBPL5Q9H0X9 879 aaPredicted RBP15.45■□□□□ 0.06
SEC16A-209ENST00000472305 EPB41L4AQ9HCS5 686 aaPredicted RBP15.45■□□□□ 0.06
SEC16A-209ENST00000472305 MKRN1Q9UHC7 482 aaKnown RBP15.45■□□□□ 0.06
SEC16A-209ENST00000472305 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
SEC16A-209ENST00000472305 FZD1Q9UP38 647 aa15.45■□□□□ 0.06
SEC16A-209ENST00000472305 MYH7P12883 1935 aa15.45■□□□□ 0.06
SEC16A-209ENST00000472305 POLR2AP24928 1970 aaKnown RBP15.44■□□□□ 0.06
SEC16A-209ENST00000472305 HIP1O00291 1037 aa15.44■□□□□ 0.06
SEC16A-209ENST00000472305 ENTPD3O75355 529 aa15.44■□□□□ 0.06
SEC16A-209ENST00000472305 CYP2D6P10635 497 aa15.44■□□□□ 0.06
SEC16A-209ENST00000472305 FKBP1CQ5VVH2 108 aa15.44■□□□□ 0.06
SEC16A-209ENST00000472305 FAM83AQ86UY5 434 aa15.44■□□□□ 0.06
SEC16A-209ENST00000472305 DCP1AQ9NPI6 582 aaPredicted RBP15.44■□□□□ 0.06
SEC16A-209ENST00000472305 CYP2D7A0A087X1C5 515 aa15.43■□□□□ 0.06
SEC16A-209ENST00000472305 PATL2C9JE40 543 aaKnown RBP15.43■□□□□ 0.06
SEC16A-209ENST00000472305 CDC45O75419 566 aa15.43■□□□□ 0.06
SEC16A-209ENST00000472305 TNNI2P48788 182 aa15.43■□□□□ 0.06
SEC16A-209ENST00000472305 PRDM10Q9NQV6 1147 aa15.43■□□□□ 0.06
SEC16A-209ENST00000472305 PALD1Q9ULE6 856 aa15.43■□□□□ 0.06
SEC16A-209ENST00000472305 CCDC171Q6TFL3 1326 aa15.43■□□□□ 0.06
SEC16A-209ENST00000472305 PASKQ96RG2 1323 aa15.43■□□□□ 0.06
SEC16A-209ENST00000472305 SGSM2O43147 1006 aa15.42■□□□□ 0.06
SEC16A-209ENST00000472305 NPM3O75607 178 aaKnown RBP15.42■□□□□ 0.06
SEC16A-209ENST00000472305 TNFAIP1Q13829 316 aa15.42■□□□□ 0.06
SEC16A-209ENST00000472305 CERS3Q8IU89 383 aa15.42■□□□□ 0.06
SEC16A-209ENST00000472305 IFNL3Q8IZI9 196 aa15.42■□□□□ 0.06
SEC16A-209ENST00000472305 ESYT1Q9BSJ8 1104 aa15.42■□□□□ 0.06
SEC16A-209ENST00000472305 ZNF408Q9H9D4 720 aa15.42■□□□□ 0.06
SEC16A-209ENST00000472305 SSC5DA1L4H1 1573 aa15.41■□□□□ 0.06
SEC16A-209ENST00000472305 APPP05067 770 aa15.41■□□□□ 0.06
SEC16A-209ENST00000472305 HSPD1P10809 573 aaKnown RBP15.41■□□□□ 0.06
SEC16A-209ENST00000472305 PLCD1P51178 756 aa15.41■□□□□ 0.06
SEC16A-209ENST00000472305 PRKG1Q13976 671 aa15.41■□□□□ 0.06
SEC16A-209ENST00000472305 MOB2Q70IA6 237 aa15.41■□□□□ 0.06
SEC16A-209ENST00000472305 MIGA2Q7L4E1 593 aa15.41■□□□□ 0.06
SEC16A-209ENST00000472305 MCM9Q9NXL9 1143 aa15.41■□□□□ 0.06
SEC16A-209ENST00000472305 PPP2R3BQ9Y5P8 575 aa15.41■□□□□ 0.06
SEC16A-209ENST00000472305 AK9Q5TCS8 1911 aa15.41■□□□□ 0.06
SEC16A-209ENST00000472305 ECM29Q5VYK3 1845 aa15.4■□□□□ 0.06
SEC16A-209ENST00000472305 FAM196BA6NMK8 535 aa15.4■□□□□ 0.06
SEC16A-209ENST00000472305 USP17L12C9JPN9 530 aa15.4■□□□□ 0.06
SEC16A-209ENST00000472305 USP17L21D6R901 530 aa15.4■□□□□ 0.06
SEC16A-209ENST00000472305 CELF2O95319 508 aaKnown RBP15.4■□□□□ 0.06
SEC16A-209ENST00000472305 PTH1RQ03431 593 aa15.4■□□□□ 0.06
SEC16A-209ENST00000472305 CST9Q5W186 159 aa15.4■□□□□ 0.06
SEC16A-209ENST00000472305 CTR9Q6PD62 1173 aa15.4■□□□□ 0.06
SEC16A-209ENST00000472305 ZSCAN29Q8IWY8 852 aaPredicted RBP15.4■□□□□ 0.06
SEC16A-209ENST00000472305 ATP8A2Q9NTI2 1148 aa15.4■□□□□ 0.06
SEC16A-209ENST00000472305 ATRNL1Q5VV63 1379 aa15.39■□□□□ 0.05
SEC16A-209ENST00000472305 POLR3DP05423 398 aaPredicted RBP15.39■□□□□ 0.05
SEC16A-209ENST00000472305 GNAT2P19087 354 aa15.39■□□□□ 0.05
SEC16A-209ENST00000472305 RUFY2Q8WXA3 655 aa15.39■□□□□ 0.05
SEC16A-209ENST00000472305 CSRNP1Q96S65 589 aa15.39■□□□□ 0.05
SEC16A-209ENST00000472305 RAD50Q92878 1312 aa15.39■□□□□ 0.05
SEC16A-209ENST00000472305 RPAP1Q9BWH6 1393 aaPredicted RBP15.38■□□□□ 0.05
SEC16A-209ENST00000472305 CDK5RAP2Q96SN8 1893 aa15.38■□□□□ 0.05
SEC16A-209ENST00000472305 FOXN1O15353 648 aa15.38■□□□□ 0.05
SEC16A-209ENST00000472305 USP2O75604 605 aaPredicted RBP15.38■□□□□ 0.05
SEC16A-209ENST00000472305 FGAP02671 866 aa15.38■□□□□ 0.05
SEC16A-209ENST00000472305 TDO2P48775 406 aa15.38■□□□□ 0.05
SEC16A-209ENST00000472305 STK11IPQ8N1F8 1099 aa15.38■□□□□ 0.05
SEC16A-209ENST00000472305 DYNLL2Q96FJ2 89 aa15.38■□□□□ 0.05
SEC16A-209ENST00000472305 LSG1Q9H089 658 aaKnown RBP15.38■□□□□ 0.05
SEC16A-209ENST00000472305 DNAJC18Q9H819 358 aa15.38■□□□□ 0.05
SEC16A-209ENST00000472305 TACC3Q9Y6A5 838 aa15.38■□□□□ 0.05
SEC16A-209ENST00000472305 MINDY4BA8MYZ0 360 aa15.37■□□□□ 0.05
SEC16A-209ENST00000472305 RRP1BQ14684 758 aaKnown RBP15.37■□□□□ 0.05
SEC16A-209ENST00000472305 SUPT20HL1Q3ZLR7 823 aa15.37■□□□□ 0.05
SEC16A-209ENST00000472305 C12orf60Q5U649 245 aa15.37■□□□□ 0.05
SEC16A-209ENST00000472305 GIMAP6Q6P9H5 292 aa15.37■□□□□ 0.05
SEC16A-209ENST00000472305 DHX36Q9H2U1 1008 aaKnown RBP15.37■□□□□ 0.05
SEC16A-209ENST00000472305 UBE2Q2LH0YL09 131 aa15.36■□□□□ 0.05
SEC16A-209ENST00000472305 MFAP1P55081 439 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms