RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 IFNL3Q8IZI9 196 aa20.12■□□□□ 0.81
CCM2-205ENST00000472223 FAM151AQ8WW52 585 aa20.12■□□□□ 0.81
CCM2-205ENST00000472223 DHX36Q9H2U1 1008 aaKnown RBP20.12■□□□□ 0.81
CCM2-205ENST00000472223 MCM9Q9NXL9 1143 aa20.12■□□□□ 0.81
CCM2-205ENST00000472223 PRKAB2O43741 272 aa20.11■□□□□ 0.81
CCM2-205ENST00000472223 WDHD1O75717 1129 aaPredicted RBP20.11■□□□□ 0.81
CCM2-205ENST00000472223 HLA-DOAP06340 250 aa20.11■□□□□ 0.81
CCM2-205ENST00000472223 TTC6Q86TZ1 520 aa20.11■□□□□ 0.81
CCM2-205ENST00000472223 LDHDQ86WU2 507 aa20.11■□□□□ 0.81
CCM2-205ENST00000472223 HOOK2Q96ED9 719 aa20.11■□□□□ 0.81
CCM2-205ENST00000472223 TRIM34Q9BYJ4 488 aa20.11■□□□□ 0.81
CCM2-205ENST00000472223 PPP2R3BQ9Y5P8 575 aa20.11■□□□□ 0.81
CCM2-205ENST00000472223 U3KPZ7 1027 aaPredicted RBP20.11■□□□□ 0.81
CCM2-205ENST00000472223 FLT1P17948 1338 aa20.1■□□□□ 0.81
CCM2-205ENST00000472223 GSG1L2A8MUP6 293 aa20.1■□□□□ 0.81
CCM2-205ENST00000472223 SLC3A2P08195 630 aaKnown RBP20.1■□□□□ 0.81
CCM2-205ENST00000472223 MCCP23508 829 aa20.1■□□□□ 0.81
CCM2-205ENST00000472223 OSBPL5Q9H0X9 879 aaPredicted RBP20.1■□□□□ 0.81
CCM2-205ENST00000472223 DCP1AQ9NPI6 582 aaPredicted RBP20.1■□□□□ 0.81
CCM2-205ENST00000472223 ARPP21Q9UBL0 812 aaPredicted RBP20.1■□□□□ 0.81
CCM2-205ENST00000472223 EPB41L2O43491 1005 aaKnown RBP20.09■□□□□ 0.81
CCM2-205ENST00000472223 NFIAQ12857 509 aa20.09■□□□□ 0.81
CCM2-205ENST00000472223 RASA3Q14644 834 aa20.09■□□□□ 0.81
CCM2-205ENST00000472223 ALX1Q15699 326 aa20.09■□□□□ 0.81
CCM2-205ENST00000472223 C8orf34Q49A92 452 aa20.09■□□□□ 0.81
CCM2-205ENST00000472223 VPS53Q5VIR6 699 aa20.09■□□□□ 0.81
CCM2-205ENST00000472223 RNF20Q5VTR2 975 aa20.09■□□□□ 0.81
CCM2-205ENST00000472223 CDC37L1Q7L3B6 337 aa20.09■□□□□ 0.81
CCM2-205ENST00000472223 KRT26Q7Z3Y9 468 aa20.09■□□□□ 0.81
CCM2-205ENST00000472223 DEFB129Q9H1M3 183 aa20.09■□□□□ 0.81
CCM2-205ENST00000472223 PGAP2Q9UHJ9 254 aa20.09■□□□□ 0.81
CCM2-205ENST00000472223 SAP30BPQ9UHR5 308 aaKnown RBP20.09■□□□□ 0.81
CCM2-205ENST00000472223 MINDY4BA8MYZ0 360 aa20.08■□□□□ 0.81
CCM2-205ENST00000472223 ZNF213O14771 459 aa20.08■□□□□ 0.81
CCM2-205ENST00000472223 IMMTQ16891 758 aaKnown RBP20.08■□□□□ 0.81
CCM2-205ENST00000472223 FAM198AQ9UFP1 575 aa20.08■□□□□ 0.81
CCM2-205ENST00000472223 FOCADQ5VW36 1801 aa20.08■□□□□ 0.8
CCM2-205ENST00000472223 MYH1P12882 1939 aa20.08■□□□□ 0.8
CCM2-205ENST00000472223 CDK5RAP2Q96SN8 1893 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 ASTN2O75129 1339 aaPredicted RBP20.07■□□□□ 0.8
CCM2-205ENST00000472223 USP17L12C9JPN9 530 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 USP17L21D6R901 530 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 FGAP02671 866 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 NF2P35240 595 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 SUPT20HL1Q3ZLR7 823 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 CRACR2BQ8N4Y2 399 aaPredicted RBP20.07■□□□□ 0.8
CCM2-205ENST00000472223 MAP4K1Q92918 833 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 IL25Q9H293 177 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 ZNF287Q9HBT7 754 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 DDX4Q9NQI0 724 aaKnown RBP20.07■□□□□ 0.8
CCM2-205ENST00000472223 PI4KBQ9UBF8 816 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 NAV1Q8NEY1 1877 aa20.07■□□□□ 0.8
CCM2-205ENST00000472223 POLR2AP24928 1970 aaKnown RBP20.06■□□□□ 0.8
CCM2-205ENST00000472223 ZMYM6O95789 1325 aa20.06■□□□□ 0.8
CCM2-205ENST00000472223 PTH1RQ03431 593 aa20.06■□□□□ 0.8
CCM2-205ENST00000472223 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
CCM2-205ENST00000472223 CSRNP1Q96S65 589 aa20.06■□□□□ 0.8
CCM2-205ENST00000472223 LSG1Q9H089 658 aaKnown RBP20.06■□□□□ 0.8
CCM2-205ENST00000472223 PALD1Q9ULE6 856 aa20.06■□□□□ 0.8
CCM2-205ENST00000472223 ZKSCAN1P17029 563 aaPredicted RBP20.05■□□□□ 0.8
CCM2-205ENST00000472223 CHADLQ6NUI6 762 aa20.05■□□□□ 0.8
CCM2-205ENST00000472223 CTR9Q6PD62 1173 aa20.05■□□□□ 0.8
CCM2-205ENST00000472223 USP48Q86UV5 1035 aa20.05■□□□□ 0.8
CCM2-205ENST00000472223 FOXP4Q8IVH2 680 aaPredicted RBP20.05■□□□□ 0.8
CCM2-205ENST00000472223 TMEM39BQ9GZU3 492 aa20.05■□□□□ 0.8
CCM2-205ENST00000472223 RBM8AQ9Y5S9 174 aaKnown RBP20.05■□□□□ 0.8
CCM2-205ENST00000472223 BAZ2AQ9UIF9 1905 aaKnown RBP20.05■□□□□ 0.8
CCM2-205ENST00000472223 EPB41L4AQ9HCS5 686 aaPredicted RBP20.04■□□□□ 0.8
CCM2-205ENST00000472223 MKRN1Q9UHC7 482 aaKnown RBP20.04■□□□□ 0.8
CCM2-205ENST00000472223 TAOK2Q9UL54 1235 aa20.04■□□□□ 0.8
CCM2-205ENST00000472223 COL2A1P02458 1487 aaPredicted RBP20.04■□□□□ 0.8
CCM2-205ENST00000472223 PDE4BQ07343 736 aa20.03■□□□□ 0.8
CCM2-205ENST00000472223 PPARAQ07869 468 aa20.03■□□□□ 0.8
CCM2-205ENST00000472223 SLC4A8Q2Y0W8 1093 aa20.03■□□□□ 0.8
CCM2-205ENST00000472223 C12orf60Q5U649 245 aa20.03■□□□□ 0.8
CCM2-205ENST00000472223 DCAF15Q66K64 600 aa20.03■□□□□ 0.8
CCM2-205ENST00000472223 MAP1SQ66K74 1059 aaPredicted RBP20.03■□□□□ 0.8
CCM2-205ENST00000472223 BACH2Q9BYV9 841 aa20.03■□□□□ 0.8
CCM2-205ENST00000472223 RNF41Q9H4P4 317 aaPredicted RBP20.03■□□□□ 0.8
CCM2-205ENST00000472223 SERPINB13Q9UIV8 391 aa20.03■□□□□ 0.8
CCM2-205ENST00000472223 SCAF8Q9UPN6 1271 aaKnown RBP20.03■□□□□ 0.8
CCM2-205ENST00000472223 CNTNAP1P78357 1384 aa20.03■□□□□ 0.8
CCM2-205ENST00000472223 ZFPM1Q8IX07 1006 aa20.02■□□□□ 0.8
CCM2-205ENST00000472223 ZNF784Q8NCA9 323 aaPredicted RBP20.02■□□□□ 0.8
CCM2-205ENST00000472223 SMC1BQ8NDV3 1235 aa20.02■□□□□ 0.8
CCM2-205ENST00000472223 USP26Q9BXU7 913 aa20.02■□□□□ 0.8
CCM2-205ENST00000472223 HERC5Q9UII4 1024 aaKnown RBP20.02■□□□□ 0.8
CCM2-205ENST00000472223 ATRNL1Q5VV63 1379 aa20.02■□□□□ 0.8
CCM2-205ENST00000472223 DDTLA6NHG4 134 aaPredicted RBP20.01■□□□□ 0.79
CCM2-205ENST00000472223 ADM5C9JUS6 153 aa20.01■□□□□ 0.79
CCM2-205ENST00000472223 POTEIP0CG38 1075 aa20.01■□□□□ 0.79
CCM2-205ENST00000472223 POTEJP0CG39 1038 aa20.01■□□□□ 0.79
CCM2-205ENST00000472223 TRDNQ13061 729 aa20.01■□□□□ 0.79
CCM2-205ENST00000472223 GLIS2Q9BZE0 524 aaPredicted RBP20.01■□□□□ 0.79
CCM2-205ENST00000472223 EHD4Q9H223 541 aa20.01■□□□□ 0.79
CCM2-205ENST00000472223 MKNK2Q9HBH9 465 aa20.01■□□□□ 0.79
CCM2-205ENST00000472223 SWAP70Q9UH65 585 aa20.01■□□□□ 0.79
CCM2-205ENST00000472223 FOXP2O15409 715 aa20■□□□□ 0.79
CCM2-205ENST00000472223 PPP1R12BO60237 982 aaPredicted RBP20■□□□□ 0.79
CCM2-205ENST00000472223 TOMM70O94826 608 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms