RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
SPC25-203ENST00000472216 IRS1P35568 1242 aa13.11□□□□□ -0.31
SPC25-203ENST00000472216 TNFAIP1Q13829 316 aa13.11□□□□□ -0.31
SPC25-203ENST00000472216 MTHFSDQ2M296 383 aaKnown RBP13.11□□□□□ -0.31
SPC25-203ENST00000472216 GIGYF2Q6Y7W6 1299 aaKnown RBP13.11□□□□□ -0.31
SPC25-203ENST00000472216 SLC39A5Q6ZMH5 540 aa13.11□□□□□ -0.31
SPC25-203ENST00000472216 LURAP1LQ8IV03 231 aa13.11□□□□□ -0.31
SPC25-203ENST00000472216 TRIB2Q92519 343 aa13.11□□□□□ -0.31
SPC25-203ENST00000472216 PBXIP1Q96AQ6 731 aa13.11□□□□□ -0.31
SPC25-203ENST00000472216 FSD1Q9BTV5 496 aa13.11□□□□□ -0.31
SPC25-203ENST00000472216 JAG2Q9Y219 1238 aa13.11□□□□□ -0.31
SPC25-203ENST00000472216 TACC3Q9Y6A5 838 aa13.11□□□□□ -0.31
SPC25-203ENST00000472216 GCN1Q92616 2671 aaKnown RBP13.1□□□□□ -0.31
SPC25-203ENST00000472216 RAG1P15918 1043 aa13.1□□□□□ -0.31
SPC25-203ENST00000472216 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
SPC25-203ENST00000472216 TTLL7Q6ZT98 887 aa13.1□□□□□ -0.31
SPC25-203ENST00000472216 H0Y858 1186 aa13.09□□□□□ -0.31
SPC25-203ENST00000472216 PLXNA3P51805 1871 aa13.09□□□□□ -0.31
SPC25-203ENST00000472216 DOCK3Q8IZD9 2030 aa13.09□□□□□ -0.31
SPC25-203ENST00000472216 UPF3BQ9BZI7 483 aaKnown RBP13.09□□□□□ -0.31
SPC25-203ENST00000472216 TLR9Q9NR96 1032 aa13.09□□□□□ -0.31
SPC25-203ENST00000472216 A0A0G2JMZ2 1700 aa13.08□□□□□ -0.32
SPC25-203ENST00000472216 DNM1LO00429 736 aa13.08□□□□□ -0.32
SPC25-203ENST00000472216 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.32
SPC25-203ENST00000472216 EPHA10Q5JZY3 1008 aa13.08□□□□□ -0.32
SPC25-203ENST00000472216 CCDC174Q6PII3 467 aa13.08□□□□□ -0.32
SPC25-203ENST00000472216 NKD2Q969F2 451 aaPredicted RBP13.08□□□□□ -0.32
SPC25-203ENST00000472216 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPC25-203ENST00000472216 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.32
SPC25-203ENST00000472216 ALG13Q9NP73 1137 aaKnown RBP13.08□□□□□ -0.32
SPC25-203ENST00000472216 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.32
SPC25-203ENST00000472216 RPAP1Q9BWH6 1393 aaPredicted RBP13.07□□□□□ -0.32
SPC25-203ENST00000472216 NBL1P41271 181 aa13.07□□□□□ -0.32
SPC25-203ENST00000472216 CACNB2Q08289 660 aaPredicted RBP13.07□□□□□ -0.32
SPC25-203ENST00000472216 MOGSQ13724 837 aa13.07□□□□□ -0.32
SPC25-203ENST00000472216 PPP2R2DQ66LE6 453 aa13.07□□□□□ -0.32
SPC25-203ENST00000472216 TTLL5Q6EMB2 1281 aa13.07□□□□□ -0.32
SPC25-203ENST00000472216 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
SPC25-203ENST00000472216 SMCR8Q8TEV9 937 aaPredicted RBP13.07□□□□□ -0.32
SPC25-203ENST00000472216 GJD2Q9UKL4 321 aa13.07□□□□□ -0.32
SPC25-203ENST00000472216 ZIC2O95409 532 aaPredicted RBP13.06□□□□□ -0.32
SPC25-203ENST00000472216 CCND3P30281 292 aaPredicted RBP13.06□□□□□ -0.32
SPC25-203ENST00000472216 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
SPC25-203ENST00000472216 WRNIP1Q96S55 665 aa13.06□□□□□ -0.32
SPC25-203ENST00000472216 IL9P15248 144 aa13.05□□□□□ -0.32
SPC25-203ENST00000472216 SNX17Q15036 470 aa13.05□□□□□ -0.32
SPC25-203ENST00000472216 LEXMQ3ZCV2 418 aa13.05□□□□□ -0.32
SPC25-203ENST00000472216 RASIP1Q5U651 963 aa13.05□□□□□ -0.32
SPC25-203ENST00000472216 GPAT2Q6NUI2 795 aa13.05□□□□□ -0.32
SPC25-203ENST00000472216 TRMT44Q8IYL2 757 aaKnown RBP13.05□□□□□ -0.32
SPC25-203ENST00000472216 PRMT6Q96LA8 375 aaPredicted RBP13.05□□□□□ -0.32
SPC25-203ENST00000472216 TEPSINQ96N21 525 aa13.05□□□□□ -0.32
SPC25-203ENST00000472216 CARD14Q9BXL6 1004 aa13.05□□□□□ -0.32
SPC25-203ENST00000472216 BSDC1Q9NW68 430 aaPredicted RBP13.05□□□□□ -0.32
SPC25-203ENST00000472216 TRMT112Q9UI30 125 aaKnown RBP13.05□□□□□ -0.32
SPC25-203ENST00000472216 YBX2Q9Y2T7 364 aaKnown RBP13.05□□□□□ -0.32
SPC25-203ENST00000472216 AOX1Q06278 1338 aa13.05□□□□□ -0.32
SPC25-203ENST00000472216 SH3TC1Q8TE82 1336 aa13.05□□□□□ -0.32
SPC25-203ENST00000472216 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
SPC25-203ENST00000472216 PTCRAQ6ISU1 281 aaPredicted RBP13.04□□□□□ -0.32
SPC25-203ENST00000472216 FBXL6Q8N531 539 aa13.04□□□□□ -0.32
SPC25-203ENST00000472216 ANKRD13CQ8N6S4 541 aa13.04□□□□□ -0.32
SPC25-203ENST00000472216 LPAR1Q92633 364 aa13.04□□□□□ -0.32
SPC25-203ENST00000472216 PCDHAC2Q9Y5I4 1007 aa13.04□□□□□ -0.32
SPC25-203ENST00000472216 RFXAPO00287 272 aa13.03□□□□□ -0.32
SPC25-203ENST00000472216 KIAA0355O15063 1070 aa13.03□□□□□ -0.32
SPC25-203ENST00000472216 CLTBP09497 229 aa13.03□□□□□ -0.32
SPC25-203ENST00000472216 CYP2B6P20813 491 aa13.03□□□□□ -0.32
SPC25-203ENST00000472216 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
SPC25-203ENST00000472216 SF3B3Q15393 1217 aaKnown RBP13.03□□□□□ -0.32
SPC25-203ENST00000472216 CFAP100Q494V2 611 aa13.03□□□□□ -0.32
SPC25-203ENST00000472216 CDAN1Q8IWY9 1227 aa13.03□□□□□ -0.32
SPC25-203ENST00000472216 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.03□□□□□ -0.32
SPC25-203ENST00000472216 TMEM221A6NGB7 291 aa13.02□□□□□ -0.33
SPC25-203ENST00000472216 M0R296 226 aa13.02□□□□□ -0.33
SPC25-203ENST00000472216 XRCC5P13010 732 aaKnown RBP13.02□□□□□ -0.33
SPC25-203ENST00000472216 SLC5A1P13866 664 aa13.02□□□□□ -0.33
SPC25-203ENST00000472216 TLE2Q04725 743 aa13.02□□□□□ -0.33
SPC25-203ENST00000472216 PUS10Q3MIT2 529 aaKnown RBP13.02□□□□□ -0.33
SPC25-203ENST00000472216 C1orf53Q5VUE5 145 aa13.02□□□□□ -0.33
SPC25-203ENST00000472216 KRT40Q6A162 431 aa13.02□□□□□ -0.33
SPC25-203ENST00000472216 EDAQ92838 391 aa13.02□□□□□ -0.33
SPC25-203ENST00000472216 RRP7AQ9Y3A4 280 aaKnown RBP13.02□□□□□ -0.33
SPC25-203ENST00000472216 TECTAO75443 2155 aa13.02□□□□□ -0.33
SPC25-203ENST00000472216 COL4A1P02462 1669 aa13.02□□□□□ -0.33
SPC25-203ENST00000472216 BPTFQ12830 3046 aa13.02□□□□□ -0.33
SPC25-203ENST00000472216 GRXCR2A6NFK2 248 aa13.01□□□□□ -0.33
SPC25-203ENST00000472216 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
SPC25-203ENST00000472216 MSCO60682 206 aa13.01□□□□□ -0.33
SPC25-203ENST00000472216 ZKSCAN1P17029 563 aaPredicted RBP13.01□□□□□ -0.33
SPC25-203ENST00000472216 FAM110CQ1W6H9 321 aa13.01□□□□□ -0.33
SPC25-203ENST00000472216 HERC4Q5GLZ8 1057 aaPredicted RBP13.01□□□□□ -0.33
SPC25-203ENST00000472216 TMEM240Q5SV17 173 aa13.01□□□□□ -0.33
SPC25-203ENST00000472216 MCTP2Q6DN12 878 aa13.01□□□□□ -0.33
SPC25-203ENST00000472216 FASTKD5Q7L8L6 764 aaKnown RBP13.01□□□□□ -0.33
SPC25-203ENST00000472216 COA1Q9GZY4 146 aa13.01□□□□□ -0.33
SPC25-203ENST00000472216 DLL3Q9NYJ7 618 aa13.01□□□□□ -0.33
SPC25-203ENST00000472216 BRWD1Q9NSI6 2320 aa13.01□□□□□ -0.33
SPC25-203ENST00000472216 ZFYVE26Q68DK2 2539 aa13.01□□□□□ -0.33
SPC25-203ENST00000472216 SPTBN2O15020 2390 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms