RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 PKN1Q16512 942 aa9.94□□□□□ -0.82
SCN9A-206ENST00000472119 CALR3Q96L12 384 aaKnown RBP9.94□□□□□ -0.82
SCN9A-206ENST00000472119 PRKAG2Q9UGJ0 569 aa9.94□□□□□ -0.82
SCN9A-206ENST00000472119 TNFRSF10BO14763 440 aa9.93□□□□□ -0.82
SCN9A-206ENST00000472119 PRMT3O60678 531 aa9.93□□□□□ -0.82
SCN9A-206ENST00000472119 SUGCTQ9HAC7 445 aa9.93□□□□□ -0.82
SCN9A-206ENST00000472119 TMEM63CQ9P1W3 806 aa9.93□□□□□ -0.82
SCN9A-206ENST00000472119 ZC3H7BQ9UGR2 993 aaKnown RBP9.93□□□□□ -0.82
SCN9A-206ENST00000472119 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
SCN9A-206ENST00000472119 C3P01024 1663 aa9.93□□□□□ -0.82
SCN9A-206ENST00000472119 DEPDC5O75140 1603 aa9.93□□□□□ -0.82
SCN9A-206ENST00000472119 RAB3GAP2Q9H2M9 1393 aa9.92□□□□□ -0.82
SCN9A-206ENST00000472119 PDE2AO00408 941 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-206ENST00000472119 BIN1O00499 593 aa9.92□□□□□ -0.82
SCN9A-206ENST00000472119 TRPA1O75762 1119 aa9.92□□□□□ -0.82
SCN9A-206ENST00000472119 FARP2O94887 1054 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-206ENST00000472119 PLCL1Q15111 1095 aa9.92□□□□□ -0.82
SCN9A-206ENST00000472119 ELP3Q9H9T3 547 aa9.92□□□□□ -0.82
SCN9A-206ENST00000472119 SOX13Q9UN79 622 aa9.92□□□□□ -0.82
SCN9A-206ENST00000472119 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-206ENST00000472119 VWDEQ8N2E2 1590 aa9.92□□□□□ -0.82
SCN9A-206ENST00000472119 FAM135AQ9P2D6 1515 aa9.92□□□□□ -0.82
SCN9A-206ENST00000472119 PZPP20742 1482 aa9.91□□□□□ -0.82
SCN9A-206ENST00000472119 CEP152O94986 1710 aa9.91□□□□□ -0.82
SCN9A-206ENST00000472119 GCC2Q8IWJ2 1684 aa9.91□□□□□ -0.82
SCN9A-206ENST00000472119 DUSP27Q5VZP5 1158 aa9.91□□□□□ -0.82
SCN9A-206ENST00000472119 HHIPQ96QV1 700 aa9.91□□□□□ -0.82
SCN9A-206ENST00000472119 MKNK1Q9BUB5 465 aa9.91□□□□□ -0.82
SCN9A-206ENST00000472119 YIPF2Q9BWQ6 316 aa9.91□□□□□ -0.82
SCN9A-206ENST00000472119 UNC13BO14795 1591 aa9.91□□□□□ -0.82
SCN9A-206ENST00000472119 NPATQ14207 1427 aa9.9□□□□□ -0.82
SCN9A-206ENST00000472119 TNRQ92752 1358 aa9.9□□□□□ -0.82
SCN9A-206ENST00000472119 MROH2AA6NES4 1674 aa9.9□□□□□ -0.82
SCN9A-206ENST00000472119 LOC100289279A0A1B0GTE1 492 aa9.9□□□□□ -0.82
SCN9A-206ENST00000472119 NFKBIEO00221 500 aa9.9□□□□□ -0.82
SCN9A-206ENST00000472119 HSPA2P54652 639 aa9.9□□□□□ -0.82
SCN9A-206ENST00000472119 DZANK1Q9NVP4 752 aa9.9□□□□□ -0.82
SCN9A-206ENST00000472119 CNTN3Q9P232 1028 aa9.9□□□□□ -0.82
SCN9A-206ENST00000472119 SALL4Q9UJQ4 1053 aa9.9□□□□□ -0.82
SCN9A-206ENST00000472119 LMTK2Q8IWU2 1503 aa9.9□□□□□ -0.82
SCN9A-206ENST00000472119 ARHGAP31Q2M1Z3 1444 aa9.9□□□□□ -0.83
SCN9A-206ENST00000472119 SOX1O00570 391 aaPredicted RBP9.89□□□□□ -0.83
SCN9A-206ENST00000472119 DLGAP3O95886 979 aa9.89□□□□□ -0.83
SCN9A-206ENST00000472119 IKBKEQ14164 716 aa9.89□□□□□ -0.83
SCN9A-206ENST00000472119 NAA30Q147X3 362 aaPredicted RBP9.89□□□□□ -0.83
SCN9A-206ENST00000472119 ZNF792Q3KQV3 632 aa9.89□□□□□ -0.83
SCN9A-206ENST00000472119 ZNF438Q7Z4V0 828 aa9.89□□□□□ -0.83
SCN9A-206ENST00000472119 C2CD4AQ8NCU7 369 aaPredicted RBP9.89□□□□□ -0.83
SCN9A-206ENST00000472119 MPHOSPH9Q99550 1183 aa9.89□□□□□ -0.83
SCN9A-206ENST00000472119 KRTAP4-5Q9BYR2 181 aa9.89□□□□□ -0.83
SCN9A-206ENST00000472119 SLC5A6Q9Y289 635 aa9.89□□□□□ -0.83
SCN9A-206ENST00000472119 ZC3H13Q5T200 1668 aaKnown RBP9.89□□□□□ -0.83
SCN9A-206ENST00000472119 CAMSAP1Q5T5Y3 1602 aa9.89□□□□□ -0.83
SCN9A-206ENST00000472119 ERVK-7P63135 1459 aa9.88□□□□□ -0.83
SCN9A-206ENST00000472119 TMEM132AQ24JP5 1023 aa9.88□□□□□ -0.83
SCN9A-206ENST00000472119 TPRNQ4KMQ1 711 aa9.88□□□□□ -0.83
SCN9A-206ENST00000472119 PDE12Q6L8Q7 609 aaKnown RBP9.88□□□□□ -0.83
SCN9A-206ENST00000472119 ZNF574Q6ZN55 896 aaPredicted RBP9.88□□□□□ -0.83
SCN9A-206ENST00000472119 PROSER2Q86WR7 435 aaPredicted RBP9.88□□□□□ -0.83
SCN9A-206ENST00000472119 KSR1Q8IVT5 923 aa9.88□□□□□ -0.83
SCN9A-206ENST00000472119 CLUAP1Q96AJ1 413 aa9.88□□□□□ -0.83
SCN9A-206ENST00000472119 UHRF1BP1Q6BDS2 1440 aa9.88□□□□□ -0.83
SCN9A-206ENST00000472119 CFAP65Q6ZU64 1925 aaKnown RBP9.88□□□□□ -0.83
SCN9A-206ENST00000472119 EFCAB6Q5THR3 1501 aa9.87□□□□□ -0.83
SCN9A-206ENST00000472119 IQGAP3Q86VI3 1631 aa9.87□□□□□ -0.83
SCN9A-206ENST00000472119 RFX1P22670 979 aa9.87□□□□□ -0.83
SCN9A-206ENST00000472119 IDI1Q13907 227 aa9.87□□□□□ -0.83
SCN9A-206ENST00000472119 CDCA8Q53HL2 280 aa9.87□□□□□ -0.83
SCN9A-206ENST00000472119 EXOSC6Q5RKV6 272 aaKnown RBP9.87□□□□□ -0.83
SCN9A-206ENST00000472119 CAPN12Q6ZSI9 719 aa9.87□□□□□ -0.83
SCN9A-206ENST00000472119 EZH1Q92800 747 aaPredicted RBP9.87□□□□□ -0.83
SCN9A-206ENST00000472119 GATA6Q92908 595 aa9.87□□□□□ -0.83
SCN9A-206ENST00000472119 PCGF6Q9BYE7 350 aa9.87□□□□□ -0.83
SCN9A-206ENST00000472119 NOVA2Q9UNW9 492 aaKnown RBP9.87□□□□□ -0.83
SCN9A-206ENST00000472119 SETD1BQ9UPS6 1966 aaKnown RBP9.86□□□□□ -0.83
SCN9A-206ENST00000472119 ZBTB39O15060 712 aa9.86□□□□□ -0.83
SCN9A-206ENST00000472119 CES1P23141 567 aa9.86□□□□□ -0.83
SCN9A-206ENST00000472119 ZNF765Q7L2R6 523 aa9.86□□□□□ -0.83
SCN9A-206ENST00000472119 FNBP4Q8N3X1 1017 aaPredicted RBP9.86□□□□□ -0.83
SCN9A-206ENST00000472119 CCER1Q8TC90 406 aaPredicted RBP9.86□□□□□ -0.83
SCN9A-206ENST00000472119 BCL7CQ8WUZ0 217 aaPredicted RBP9.86□□□□□ -0.83
SCN9A-206ENST00000472119 TET3O43151 1660 aa9.86□□□□□ -0.83
SCN9A-206ENST00000472119 LMTK3Q96Q04 1460 aa9.85□□□□□ -0.83
SCN9A-206ENST00000472119 ACIN1Q9UKV3 1341 aaKnown RBP9.85□□□□□ -0.83
SCN9A-206ENST00000472119 SPATA31D1Q6ZQQ2 1576 aa9.85□□□□□ -0.83
SCN9A-206ENST00000472119 NOS1P29475 1434 aa9.85□□□□□ -0.83
SCN9A-206ENST00000472119 KRTAP9-7A8MTY7 169 aa9.85□□□□□ -0.83
SCN9A-206ENST00000472119 SOX4Q06945 474 aaPredicted RBP9.85□□□□□ -0.83
SCN9A-206ENST00000472119 OCLNQ16625 522 aa9.85□□□□□ -0.83
SCN9A-206ENST00000472119 SWI5Q1ZZU3 235 aa9.85□□□□□ -0.83
SCN9A-206ENST00000472119 C1orf127Q8N9H9 656 aa9.85□□□□□ -0.83
SCN9A-206ENST00000472119 NUDT16Q96DE0 195 aaKnown RBP9.85□□□□□ -0.83
SCN9A-206ENST00000472119 SLC52A1Q9NWF4 448 aa9.85□□□□□ -0.83
SCN9A-206ENST00000472119 RPRD2Q5VT52 1461 aaKnown RBP9.85□□□□□ -0.83
SCN9A-206ENST00000472119 RAB6AP20340 208 aa9.84□□□□□ -0.83
SCN9A-206ENST00000472119 CYP27A1Q02318 531 aa9.84□□□□□ -0.83
SCN9A-206ENST00000472119 BSNDQ8WZ55 320 aa9.84□□□□□ -0.83
SCN9A-206ENST00000472119 FAM168AQ92567 244 aa9.84□□□□□ -0.83
SCN9A-206ENST00000472119 STIM2Q9P246 746 aa9.84□□□□□ -0.83
SCN9A-206ENST00000472119 E9PCH4 1651 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms