RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 DDNO94850 711 aaPredicted RBP22.59■■□□□ 1.21
SNX4-203ENST00000471751 TDO2P48775 406 aa22.59■■□□□ 1.21
SNX4-203ENST00000471751 SPDYE2Q495Y8 402 aa22.59■■□□□ 1.21
SNX4-203ENST00000471751 FAM83AQ86UY5 434 aa22.59■■□□□ 1.21
SNX4-203ENST00000471751 ADARB2Q9NS39 739 aaKnown RBP22.59■■□□□ 1.21
SNX4-203ENST00000471751 COL2A1P02458 1487 aaPredicted RBP22.59■■□□□ 1.21
SNX4-203ENST00000471751 PRKAB2O43741 272 aa22.58■■□□□ 1.21
SNX4-203ENST00000471751 TNFAIP1Q13829 316 aa22.58■■□□□ 1.21
SNX4-203ENST00000471751 CREB3L3Q68CJ9 461 aa22.58■■□□□ 1.21
SNX4-203ENST00000471751 TGFBRAP1Q8WUH2 860 aa22.58■■□□□ 1.21
SNX4-203ENST00000471751 SDR42E1Q8WUS8 393 aa22.58■■□□□ 1.21
SNX4-203ENST00000471751 SLC3A2P08195 630 aaKnown RBP22.57■■□□□ 1.2
SNX4-203ENST00000471751 TTC6Q86TZ1 520 aa22.57■■□□□ 1.2
SNX4-203ENST00000471751 TM6SF1Q9BZW5 370 aa22.57■■□□□ 1.2
SNX4-203ENST00000471751 EPB41L4AQ9HCS5 686 aaPredicted RBP22.57■■□□□ 1.2
SNX4-203ENST00000471751 FLT1P17948 1338 aa22.57■■□□□ 1.2
SNX4-203ENST00000471751 SLC27A2O14975 620 aa22.57■■□□□ 1.2
SNX4-203ENST00000471751 PSMA5P28066 241 aa22.57■■□□□ 1.2
SNX4-203ENST00000471751 TNNI2P48788 182 aa22.57■■□□□ 1.2
SNX4-203ENST00000471751 KIF4BQ2VIQ3 1234 aa22.57■■□□□ 1.2
SNX4-203ENST00000471751 USP50Q70EL3 339 aaPredicted RBP22.57■■□□□ 1.2
SNX4-203ENST00000471751 ZC3H15Q8WU90 426 aaKnown RBP22.57■■□□□ 1.2
SNX4-203ENST00000471751 RNF41Q9H4P4 317 aaPredicted RBP22.57■■□□□ 1.2
SNX4-203ENST00000471751 TDRD3Q9H7E2 651 aaKnown RBP22.57■■□□□ 1.2
SNX4-203ENST00000471751 ZNF287Q9HBT7 754 aa22.57■■□□□ 1.2
SNX4-203ENST00000471751 ZNF70Q9UC06 446 aaPredicted RBP22.57■■□□□ 1.2
SNX4-203ENST00000471751 HACL1Q9UJ83 578 aa22.57■■□□□ 1.2
SNX4-203ENST00000471751 WDR90Q96KV7 1748 aa22.56■■□□□ 1.2
SNX4-203ENST00000471751 PITPNM2Q9BZ72 1349 aa22.56■■□□□ 1.2
SNX4-203ENST00000471751 CYP21A2P08686 494 aa22.56■■□□□ 1.2
SNX4-203ENST00000471751 HMGB1P09429 215 aaKnown RBP22.56■■□□□ 1.2
SNX4-203ENST00000471751 C12orf60Q5U649 245 aa22.56■■□□□ 1.2
SNX4-203ENST00000471751 CTR9Q6PD62 1173 aa22.56■■□□□ 1.2
SNX4-203ENST00000471751 OSBPL5Q9H0X9 879 aaPredicted RBP22.56■■□□□ 1.2
SNX4-203ENST00000471751 MCM9Q9NXL9 1143 aa22.56■■□□□ 1.2
SNX4-203ENST00000471751 USP17L12C9JPN9 530 aa22.55■■□□□ 1.2
SNX4-203ENST00000471751 USP17L21D6R901 530 aa22.55■■□□□ 1.2
SNX4-203ENST00000471751 TOMM70O94826 608 aa22.55■■□□□ 1.2
SNX4-203ENST00000471751 FGRP09769 529 aa22.55■■□□□ 1.2
SNX4-203ENST00000471751 PNMA8AQ86V59 439 aaPredicted RBP22.55■■□□□ 1.2
SNX4-203ENST00000471751 FAM151AQ8WW52 585 aa22.55■■□□□ 1.2
SNX4-203ENST00000471751 MYH1P12882 1939 aa22.54■■□□□ 1.2
SNX4-203ENST00000471751 LAMA4Q16363 1823 aa22.54■■□□□ 1.2
SNX4-203ENST00000471751 ATRNL1Q5VV63 1379 aa22.54■■□□□ 1.2
SNX4-203ENST00000471751 EPS15P42566 896 aa22.54■■□□□ 1.2
SNX4-203ENST00000471751 EHD4Q9H223 541 aa22.54■■□□□ 1.2
SNX4-203ENST00000471751 CNNM2Q9H8M5 875 aa22.54■■□□□ 1.2
SNX4-203ENST00000471751 BAZ2AQ9UIF9 1905 aaKnown RBP22.53■■□□□ 1.2
SNX4-203ENST00000471751 PPARAQ07869 468 aa22.53■■□□□ 1.2
SNX4-203ENST00000471751 NBPF9Q3BBW0 867 aa22.53■■□□□ 1.2
SNX4-203ENST00000471751 SAMD7Q7Z3H4 446 aa22.53■■□□□ 1.2
SNX4-203ENST00000471751 APOBEC3FQ8IUX4 373 aaKnown RBP22.53■■□□□ 1.2
SNX4-203ENST00000471751 FOXP4Q8IVH2 680 aaPredicted RBP22.53■■□□□ 1.2
SNX4-203ENST00000471751 MAPKAPK5Q8IW41 473 aa22.53■■□□□ 1.2
SNX4-203ENST00000471751 STAG1Q8WVM7 1258 aa22.53■■□□□ 1.2
SNX4-203ENST00000471751 PPP2R3BQ9Y5P8 575 aa22.53■■□□□ 1.2
SNX4-203ENST00000471751 SNX14Q9Y5W7 946 aa22.53■■□□□ 1.2
SNX4-203ENST00000471751 NAV1Q8NEY1 1877 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 ROBO3Q96MS0 1386 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 POLR3DP05423 398 aaPredicted RBP22.52■■□□□ 1.2
SNX4-203ENST00000471751 HLA-DOAP06340 250 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 HSPA6P17066 643 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 TRDNQ13061 729 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 RABEP1Q15276 862 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 AKNAD1Q5T1N1 836 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 MTA3Q9BTC8 594 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 PI4KBQ9UBF8 816 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 FAM198AQ9UFP1 575 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 PGAP2Q9UHJ9 254 aa22.52■■□□□ 1.2
SNX4-203ENST00000471751 ADAMTSL1Q8N6G6 1762 aa22.51■■□□□ 1.19
SNX4-203ENST00000471751 PDE4BQ07343 736 aa22.51■■□□□ 1.19
SNX4-203ENST00000471751 TBC1D10BQ4KMP7 808 aaPredicted RBP22.51■■□□□ 1.19
SNX4-203ENST00000471751 METTL16Q86W50 562 aaKnown RBP22.51■■□□□ 1.19
SNX4-203ENST00000471751 HOOK2Q96ED9 719 aa22.51■■□□□ 1.19
SNX4-203ENST00000471751 KRT23Q9C075 422 aa22.51■■□□□ 1.19
SNX4-203ENST00000471751 DDX4Q9NQI0 724 aaKnown RBP22.51■■□□□ 1.19
SNX4-203ENST00000471751 SWAP70Q9UH65 585 aa22.51■■□□□ 1.19
SNX4-203ENST00000471751 PCDHAC2Q9Y5I4 1007 aa22.51■■□□□ 1.19
SNX4-203ENST00000471751 DDX60LQ5H9U9 1706 aaKnown RBP22.5■■□□□ 1.19
SNX4-203ENST00000471751 EPHX2P34913 555 aa22.5■■□□□ 1.19
SNX4-203ENST00000471751 NFIAQ12857 509 aa22.5■■□□□ 1.19
SNX4-203ENST00000471751 MFSD6Q6ZSS7 791 aa22.5■■□□□ 1.19
SNX4-203ENST00000471751 RASEFQ8IZ41 740 aa22.5■■□□□ 1.19
SNX4-203ENST00000471751 NCOA7Q8NI08 942 aa22.5■■□□□ 1.19
SNX4-203ENST00000471751 WDR19Q8NEZ3 1342 aa22.49■■□□□ 1.19
SNX4-203ENST00000471751 SHTN1A0MZ66 631 aa22.49■■□□□ 1.19
SNX4-203ENST00000471751 E7EWF7 191 aa22.49■■□□□ 1.19
SNX4-203ENST00000471751 ORC4O43929 436 aa22.49■■□□□ 1.19
SNX4-203ENST00000471751 RBM26Q5T8P6 1007 aaKnown RBP22.49■■□□□ 1.19
SNX4-203ENST00000471751 NEK1Q96PY6 1258 aa22.49■■□□□ 1.19
SNX4-203ENST00000471751 KIF2CQ99661 725 aa22.49■■□□□ 1.19
SNX4-203ENST00000471751 ZSWIM6Q9HCJ5 1215 aa22.49■■□□□ 1.19
SNX4-203ENST00000471751 LAMB1P07942 1786 aa22.48■■□□□ 1.19
SNX4-203ENST00000471751 MINDY4BA8MYZ0 360 aa22.48■■□□□ 1.19
SNX4-203ENST00000471751 TBC1D12O60347 775 aa22.48■■□□□ 1.19
SNX4-203ENST00000471751 VEGFAP15692 232 aaPredicted RBP22.48■■□□□ 1.19
SNX4-203ENST00000471751 PICALMQ13492 652 aa22.48■■□□□ 1.19
SNX4-203ENST00000471751 FBXL16Q8N461 479 aa22.48■■□□□ 1.19
SNX4-203ENST00000471751 RBM46Q8TBY0 533 aaKnown RBP22.48■■□□□ 1.19
SNX4-203ENST00000471751 ALDH8A1Q9H2A2 487 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms