RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 OTUD7BQ6GQQ9 843 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 MICU3Q86XE3 530 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 GOLPH3LQ9H4A5 285 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 ANAPC4Q9UJX5 808 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 SLC12A7Q9Y666 1083 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 RGPD3A6NKT7 1758 aaPredicted RBP21.65■■□□□ 1.06
COL20A1-205ENST00000471582 RGPD4Q7Z3J3 1758 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 ZBTB22O15209 634 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 CDC27P30260 824 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 MRPS27Q92552 414 aaKnown RBP21.65■■□□□ 1.06
COL20A1-205ENST00000471582 CELF1Q92879 486 aaKnown RBP21.65■■□□□ 1.06
COL20A1-205ENST00000471582 ALG1Q9BT22 464 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 SENP2Q9HC62 589 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 TACC3Q9Y6A5 838 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 ECM29Q5VYK3 1845 aa21.64■■□□□ 1.06
COL20A1-205ENST00000471582 MAGEB6P1A0A0J9YX57 407 aa21.64■■□□□ 1.05
COL20A1-205ENST00000471582 CCDC69A6NI79 296 aa21.64■■□□□ 1.05
COL20A1-205ENST00000471582 KINO60870 393 aaKnown RBP21.64■■□□□ 1.05
COL20A1-205ENST00000471582 OFD1O75665 1012 aa21.64■■□□□ 1.05
COL20A1-205ENST00000471582 RPS8P62241 208 aaKnown RBP21.64■■□□□ 1.05
COL20A1-205ENST00000471582 VPS37DQ86XT2 251 aa21.64■■□□□ 1.05
COL20A1-205ENST00000471582 MIGA1Q8NAN2 632 aa21.64■■□□□ 1.05
COL20A1-205ENST00000471582 FAM84BQ96KN1 310 aaPredicted RBP21.64■■□□□ 1.05
COL20A1-205ENST00000471582 ANKRD2Q9GZV1 360 aa21.64■■□□□ 1.05
COL20A1-205ENST00000471582 RAI14Q9P0K7 980 aa21.64■■□□□ 1.05
COL20A1-205ENST00000471582 PCDHA7Q9UN72 937 aa21.64■■□□□ 1.05
COL20A1-205ENST00000471582 STK38Q15208 465 aa21.63■■□□□ 1.05
COL20A1-205ENST00000471582 TMED8Q6PL24 325 aaPredicted RBP21.63■■□□□ 1.05
COL20A1-205ENST00000471582 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.63■■□□□ 1.05
COL20A1-205ENST00000471582 SYNE3Q6ZMZ3 975 aa21.63■■□□□ 1.05
COL20A1-205ENST00000471582 FBXO33Q7Z6M2 555 aa21.63■■□□□ 1.05
COL20A1-205ENST00000471582 ADGRA1Q86SQ6 560 aa21.63■■□□□ 1.05
COL20A1-205ENST00000471582 TMTC2Q8N394 836 aa21.63■■□□□ 1.05
COL20A1-205ENST00000471582 CBX8Q9HC52 389 aa21.63■■□□□ 1.05
COL20A1-205ENST00000471582 FAM217BQ9NTX9 383 aaPredicted RBP21.63■■□□□ 1.05
COL20A1-205ENST00000471582 ABCF2Q9UG63 623 aa21.63■■□□□ 1.05
COL20A1-205ENST00000471582 IARSP41252 1262 aaKnown RBP21.63■■□□□ 1.05
COL20A1-205ENST00000471582 PPARAQ07869 468 aa21.63■■□□□ 1.05
COL20A1-205ENST00000471582 FSIP1Q8NA03 581 aa21.63■■□□□ 1.05
COL20A1-205ENST00000471582 RIOK1Q9BRS2 568 aaKnown RBP21.63■■□□□ 1.05
COL20A1-205ENST00000471582 INCENPQ9NQS7 918 aa21.63■■□□□ 1.05
COL20A1-205ENST00000471582 IQSEC3Q9UPP2 1182 aaPredicted RBP21.63■■□□□ 1.05
COL20A1-205ENST00000471582 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.63■■□□□ 1.05
COL20A1-205ENST00000471582 KIF28PB7ZC32 967 aa21.62■■□□□ 1.05
COL20A1-205ENST00000471582 POLR3DP05423 398 aaPredicted RBP21.62■■□□□ 1.05
COL20A1-205ENST00000471582 TDRD7Q8NHU6 1098 aaKnown RBP21.62■■□□□ 1.05
COL20A1-205ENST00000471582 SPTLC2O15270 562 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 AP5Z1O43299 807 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 IFNAR1P17181 557 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 NFIXQ14938 502 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 KRT40Q6A162 431 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 FMR1NBQ8N0W7 255 aaPredicted RBP21.61■■□□□ 1.05
COL20A1-205ENST00000471582 WASF1Q92558 559 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 BRIP1Q9BX63 1249 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 CLIC4Q9Y696 253 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 ERICH2A1L162 156 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 RANBP6O60518 1105 aaKnown RBP21.61■■□□□ 1.05
COL20A1-205ENST00000471582 TPM3P06753 285 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 RXRAP19793 462 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 ZNF165P49910 485 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 WTAPQ15007 396 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 SF3A1Q15459 793 aaKnown RBP21.61■■□□□ 1.05
COL20A1-205ENST00000471582 ANO1Q5XXA6 986 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 LUZP1Q86V48 1076 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 CNBD1Q8NA66 436 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 GJB4Q9NTQ9 266 aa21.61■■□□□ 1.05
COL20A1-205ENST00000471582 FMNL1O95466 1100 aaPredicted RBP21.6■■□□□ 1.05
COL20A1-205ENST00000471582 PCP11498 1178 aaKnown RBP21.6■■□□□ 1.05
COL20A1-205ENST00000471582 TRIM29Q14134 588 aa21.6■■□□□ 1.05
COL20A1-205ENST00000471582 STX1AQ16623 288 aa21.6■■□□□ 1.05
COL20A1-205ENST00000471582 PHKBQ93100 1093 aa21.6■■□□□ 1.05
COL20A1-205ENST00000471582 MYH13Q9UKX3 1938 aa21.6■■□□□ 1.05
COL20A1-205ENST00000471582 MAST2Q6P0Q8 1798 aa21.59■■□□□ 1.05
COL20A1-205ENST00000471582 U2AF2P26368 475 aaKnown RBP eCLIP21.59■■□□□ 1.05
COL20A1-205ENST00000471582 SSRP1Q08945 709 aaKnown RBP21.59■■□□□ 1.05
COL20A1-205ENST00000471582 NAP1L5Q96NT1 182 aaPredicted RBP21.59■■□□□ 1.05
COL20A1-205ENST00000471582 CCDC196A0A1B0GTZ2 297 aa21.59■■□□□ 1.05
COL20A1-205ENST00000471582 WTIPA6NIX2 430 aaPredicted RBP21.59■■□□□ 1.05
COL20A1-205ENST00000471582 GYS1P13807 737 aa21.59■■□□□ 1.05
COL20A1-205ENST00000471582 KIAA2012Q0VF49 1180 aa21.59■■□□□ 1.05
COL20A1-205ENST00000471582 ESR2Q92731 530 aa21.59■■□□□ 1.05
COL20A1-205ENST00000471582 AIFM3Q96NN9 605 aa21.59■■□□□ 1.05
COL20A1-205ENST00000471582 DNAJC25Q9H1X3 360 aa21.59■■□□□ 1.05
COL20A1-205ENST00000471582 TOMM22Q9NS69 142 aa21.59■■□□□ 1.05
COL20A1-205ENST00000471582 DUOX1Q9NRD9 1551 aa21.58■■□□□ 1.05
COL20A1-205ENST00000471582 GOLGA6L6A8MZA4 724 aa21.58■■□□□ 1.04
COL20A1-205ENST00000471582 PLCB2Q00722 1185 aa21.58■■□□□ 1.04
COL20A1-205ENST00000471582 SLC39A14Q15043 492 aa21.58■■□□□ 1.04
COL20A1-205ENST00000471582 PPP2R5BQ15173 497 aa21.58■■□□□ 1.04
COL20A1-205ENST00000471582 RRP12Q5JTH9 1297 aaKnown RBP21.58■■□□□ 1.04
COL20A1-205ENST00000471582 CCDC144CPQ8IYA2 1237 aa21.58■■□□□ 1.04
COL20A1-205ENST00000471582 SDR42E1Q8WUS8 393 aa21.58■■□□□ 1.04
COL20A1-205ENST00000471582 AKT1S1Q96B36 256 aa21.58■■□□□ 1.04
COL20A1-205ENST00000471582 MYL10Q9BUA6 226 aa21.58■■□□□ 1.04
COL20A1-205ENST00000471582 TNRC6CQ9HCJ0 1690 aaKnown RBP21.58■■□□□ 1.04
COL20A1-205ENST00000471582 IGSF3O75054 1194 aa21.57■■□□□ 1.04
COL20A1-205ENST00000471582 RTN1Q16799 776 aa21.57■■□□□ 1.04
COL20A1-205ENST00000471582 CCDC24Q8N4L8 307 aa21.57■■□□□ 1.04
COL20A1-205ENST00000471582 UBAC1Q9BSL1 405 aa21.57■■□□□ 1.04
COL20A1-205ENST00000471582 HIBADHP31937 336 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms