RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 OTOP1Q7RTM1 612 aa18.9■□□□□ 0.62
COL1A1-203ENST00000471344 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-203ENST00000471344 GPR108Q9NPR9 543 aa18.9■□□□□ 0.62
COL1A1-203ENST00000471344 RAI14Q9P0K7 980 aa18.9■□□□□ 0.62
COL1A1-203ENST00000471344 DBNLQ9UJU6 430 aaKnown RBP18.9■□□□□ 0.62
COL1A1-203ENST00000471344 NOP58Q9Y2X3 529 aaKnown RBP18.9■□□□□ 0.62
COL1A1-203ENST00000471344 TRIM17Q9Y577 477 aa18.9■□□□□ 0.62
COL1A1-203ENST00000471344 GPR75-ASB3A0A0A6YYF3 556 aa18.89■□□□□ 0.61
COL1A1-203ENST00000471344 BTBD19C9JJ37 291 aa18.89■□□□□ 0.61
COL1A1-203ENST00000471344 ENTPD3O75355 529 aa18.89■□□□□ 0.61
COL1A1-203ENST00000471344 MLLT1Q03111 559 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-203ENST00000471344 TAF1CQ15572 869 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-203ENST00000471344 PKN2Q16513 984 aaKnown RBP18.89■□□□□ 0.61
COL1A1-203ENST00000471344 TTC39AQ5SRH9 613 aa18.89■□□□□ 0.61
COL1A1-203ENST00000471344 FBXO46Q6PJ61 603 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-203ENST00000471344 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-203ENST00000471344 PHF20L1A8MW92 1017 aa18.88■□□□□ 0.61
COL1A1-203ENST00000471344 UQCRFS1P1P0C7P4 283 aa18.88■□□□□ 0.61
COL1A1-203ENST00000471344 SNAPC2Q13487 334 aa18.88■□□□□ 0.61
COL1A1-203ENST00000471344 ZSCAN29Q8IWY8 852 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-203ENST00000471344 SLF2Q8IX21 1173 aa18.88■□□□□ 0.61
COL1A1-203ENST00000471344 EAF2Q96CJ1 260 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-203ENST00000471344 CCDC8Q9H0W5 538 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-203ENST00000471344 EXOC6BQ9Y2D4 811 aa18.88■□□□□ 0.61
COL1A1-203ENST00000471344 FAM196BA6NMK8 535 aa18.87■□□□□ 0.61
COL1A1-203ENST00000471344 CYP2E1P05181 493 aaPredicted RBP18.87■□□□□ 0.61
COL1A1-203ENST00000471344 CETPP11597 493 aa18.87■□□□□ 0.61
COL1A1-203ENST00000471344 PPATQ06203 517 aa18.87■□□□□ 0.61
COL1A1-203ENST00000471344 DOCK1Q14185 1865 aa18.87■□□□□ 0.61
COL1A1-203ENST00000471344 NOL9Q5SY16 702 aaKnown RBP18.87■□□□□ 0.61
COL1A1-203ENST00000471344 LRP2BPQ9P2M1 347 aa18.87■□□□□ 0.61
COL1A1-203ENST00000471344 CDK5RAP2Q96SN8 1893 aa18.86■□□□□ 0.61
COL1A1-203ENST00000471344 PHIPQ8WWQ0 1821 aa18.86■□□□□ 0.61
COL1A1-203ENST00000471344 ZAP70P43403 619 aa18.86■□□□□ 0.61
COL1A1-203ENST00000471344 SP3Q02447 781 aa18.86■□□□□ 0.61
COL1A1-203ENST00000471344 MOGSQ13724 837 aa18.86■□□□□ 0.61
COL1A1-203ENST00000471344 ADGRA1Q86SQ6 560 aa18.86■□□□□ 0.61
COL1A1-203ENST00000471344 PIH1D3Q9NQM4 214 aaKnown RBP18.86■□□□□ 0.61
COL1A1-203ENST00000471344 COG6Q9Y2V7 657 aa18.86■□□□□ 0.61
COL1A1-203ENST00000471344 NDUFB9Q9Y6M9 179 aa18.86■□□□□ 0.61
COL1A1-203ENST00000471344 SIPA1L1O43166 1804 aa18.86■□□□□ 0.61
COL1A1-203ENST00000471344 GSTO1P78417 241 aa18.85■□□□□ 0.61
COL1A1-203ENST00000471344 CCDC158Q5M9N0 1113 aa18.85■□□□□ 0.61
COL1A1-203ENST00000471344 CCDC84Q86UT8 332 aaPredicted RBP18.85■□□□□ 0.61
COL1A1-203ENST00000471344 SH3RF3Q8TEJ3 882 aaPredicted RBP18.85■□□□□ 0.61
COL1A1-203ENST00000471344 ERO1AQ96HE7 468 aa18.85■□□□□ 0.61
COL1A1-203ENST00000471344 ZFYVE28Q9HCC9 887 aa18.85■□□□□ 0.61
COL1A1-203ENST00000471344 KCNH4Q9UQ05 1017 aa18.85■□□□□ 0.61
COL1A1-203ENST00000471344 MKI67P46013 3256 aaKnown RBP18.85■□□□□ 0.61
COL1A1-203ENST00000471344 ARHGAP39Q9C0H5 1083 aa18.84■□□□□ 0.61
COL1A1-203ENST00000471344 PTPRFP10586 1907 aa18.84■□□□□ 0.61
COL1A1-203ENST00000471344 ECM2O94769 699 aaPredicted RBP18.83■□□□□ 0.6
COL1A1-203ENST00000471344 LDHCP07864 332 aa18.83■□□□□ 0.6
COL1A1-203ENST00000471344 MAP3K10Q02779 954 aa18.83■□□□□ 0.6
COL1A1-203ENST00000471344 C20orf194Q5TEA3 1177 aa18.83■□□□□ 0.6
COL1A1-203ENST00000471344 NAA16Q6N069 864 aaPredicted RBP18.83■□□□□ 0.6
COL1A1-203ENST00000471344 SIRT2Q8IXJ6 389 aa18.83■□□□□ 0.6
COL1A1-203ENST00000471344 TEX11Q8IYF3 940 aa18.83■□□□□ 0.6
COL1A1-203ENST00000471344 SCYL3Q8IZE3 742 aa18.83■□□□□ 0.6
COL1A1-203ENST00000471344 OSBPL5Q9H0X9 879 aaPredicted RBP18.83■□□□□ 0.6
COL1A1-203ENST00000471344 EFCC1Q9HA90 598 aa18.83■□□□□ 0.6
COL1A1-203ENST00000471344 AATFQ9NY61 560 aaKnown RBP eCLIP18.83■□□□□ 0.6
COL1A1-203ENST00000471344 RCAN3Q9UKA8 241 aa18.83■□□□□ 0.6
COL1A1-203ENST00000471344 PTPN22Q9Y2R2 807 aa18.83■□□□□ 0.6
COL1A1-203ENST00000471344 FOCADQ5VW36 1801 aa18.83■□□□□ 0.6
COL1A1-203ENST00000471344 ATAD5Q96QE3 1844 aa18.82■□□□□ 0.6
COL1A1-203ENST00000471344 PTPRAP18433 802 aa18.82■□□□□ 0.6
COL1A1-203ENST00000471344 ZNF512BQ96KM6 892 aaPredicted RBP18.82■□□□□ 0.6
COL1A1-203ENST00000471344 IL1RAPL2Q9NP60 686 aa18.82■□□□□ 0.6
COL1A1-203ENST00000471344 ZHX2Q9Y6X8 837 aa18.82■□□□□ 0.6
COL1A1-203ENST00000471344 APBB1O00213 710 aa18.81■□□□□ 0.6
COL1A1-203ENST00000471344 PDHXO00330 501 aa18.81■□□□□ 0.6
COL1A1-203ENST00000471344 TLR2O60603 784 aa18.81■□□□□ 0.6
COL1A1-203ENST00000471344 RRP1BQ14684 758 aaKnown RBP18.81■□□□□ 0.6
COL1A1-203ENST00000471344 GPAT2Q6NUI2 795 aa18.81■□□□□ 0.6
COL1A1-203ENST00000471344 AACSQ86V21 672 aa18.81■□□□□ 0.6
COL1A1-203ENST00000471344 ANTXR1Q9H6X2 564 aa18.81■□□□□ 0.6
COL1A1-203ENST00000471344 ZBTB40Q9NUA8 1239 aa18.81■□□□□ 0.6
COL1A1-203ENST00000471344 CPA4Q9UI42 421 aa18.81■□□□□ 0.6
COL1A1-203ENST00000471344 COL2A1P02458 1487 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-203ENST00000471344 ADGRA2Q96PE1 1338 aa18.8■□□□□ 0.6
COL1A1-203ENST00000471344 NPM3O75607 178 aaKnown RBP18.8■□□□□ 0.6
COL1A1-203ENST00000471344 DYNLL1P63167 89 aaKnown RBP18.8■□□□□ 0.6
COL1A1-203ENST00000471344 ANKRD23Q86SG2 305 aa18.8■□□□□ 0.6
COL1A1-203ENST00000471344 ZCCHC17Q9NP64 241 aaKnown RBP18.8■□□□□ 0.6
COL1A1-203ENST00000471344 PICK1Q9NRD5 415 aa18.8■□□□□ 0.6
COL1A1-203ENST00000471344 CTGFP29279 349 aa18.79■□□□□ 0.6
COL1A1-203ENST00000471344 MAPKAPK5Q8IW41 473 aa18.79■□□□□ 0.6
COL1A1-203ENST00000471344 RHPN1Q8TCX5 695 aa18.79■□□□□ 0.6
COL1A1-203ENST00000471344 BCL11AQ9H165 835 aa18.79■□□□□ 0.6
COL1A1-203ENST00000471344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL1A1-203ENST00000471344 AFG3L2Q9Y4W6 797 aa18.79■□□□□ 0.6
COL1A1-203ENST00000471344 PTCH2Q9Y6C5 1203 aa18.79■□□□□ 0.6
COL1A1-203ENST00000471344 FLT1P17948 1338 aa18.78■□□□□ 0.6
COL1A1-203ENST00000471344 A0A0G2JLL6 359 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-203ENST00000471344 CXCL11O14625 94 aa18.78■□□□□ 0.6
COL1A1-203ENST00000471344 CTNND1O60716 968 aaKnown RBP18.78■□□□□ 0.6
COL1A1-203ENST00000471344 IDH1O75874 414 aaKnown RBP18.78■□□□□ 0.6
COL1A1-203ENST00000471344 CYP2C8P10632 490 aa18.78■□□□□ 0.6
COL1A1-203ENST00000471344 MS4A1P11836 297 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms