RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 ADAM21Q9UKJ8 722 aa12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 MROH7-TTC4A0A0A0MT08 1334 aa12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 PRAMEF22A3QJZ6 481 aa12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 RNF113AO15541 343 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 GNL2Q13823 731 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 KCNV2Q8TDN2 545 aa12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 NDUFB9Q9Y6M9 179 aa12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 C4AP0C0L4 1744 aa12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 C4BP0C0L5 1744 aa12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 CPLX1O14810 134 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 CHGBP05060 677 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 IVLP07476 585 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 LONRF2Q1L5Z9 754 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 BRINP3Q76B58 766 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 CCDC191Q8NCU4 936 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 WDR24Q96S15 920 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 HOOK1Q9UJC3 728 aaKnown RBP12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 MAST3O60307 1309 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 WDHD1O75717 1129 aaPredicted RBP12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 ACTN2P35609 894 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 RESP18Q5W5W9 173 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 SPECC1LQ69YQ0 1117 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 ANKRD13DQ6ZTN6 518 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 XAGE3Q8WTP9 111 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 DACH1Q9UI36 760 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 ARFGEF2Q9Y6D5 1785 aa12.94□□□□□ -0.34
SRGAP3-204ENST00000470951 MYO1CO00159 1063 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 RPS6KA5O75582 802 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 EIF3JO75822 258 aaKnown RBP12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 TUBBP07437 444 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 USP5P45974 858 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 ZKSCAN8Q15776 578 aaPredicted RBP12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 OTUD7BQ6GQQ9 843 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 CEP112Q8N8E3 955 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 ZCCHC17Q9NP64 241 aaKnown RBP12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 FANCLQ9NW38 375 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 HPS5Q9UPZ3 1129 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 NWD2Q9ULI1 1742 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 GOLGA8BA8MQT2 603 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 CUTAO60888 179 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 ERLIN1O75477 346 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 TDO2P48775 406 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 COPS6Q7L5N1 327 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 HDXQ7Z353 690 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 TC2NQ8N9U0 490 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 CCDC34Q96HJ3 373 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 CXorf56Q9H5V9 222 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 ATG3Q9NT62 314 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 PHF8Q9UPP1 1060 aa12.93□□□□□ -0.34
SRGAP3-204ENST00000470951 KIF28PB7ZC32 967 aa12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 TMEM232C9JQI7 657 aa12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 CDKL5O76039 1030 aa12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 LEKR1Q6ZMV7 388 aa12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 SRGAP1Q7Z6B7 1085 aa12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 PROM2Q8N271 834 aa12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 TRERF1Q96PN7 1200 aa12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 NAA15Q9BXJ9 866 aaKnown RBP12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 INTS13Q9NVM9 706 aa12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 RAB21Q9UL25 225 aa12.92□□□□□ -0.34
SRGAP3-204ENST00000470951 PRC1O43663 620 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 ZFYP08048 801 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 CCDC175P0C221 793 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 PTPAQ15257 358 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 NOM1Q5C9Z4 860 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 SHC4Q6S5L8 630 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 UBE3BQ7Z3V4 1068 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 SRLQ86TD4 932 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 MB21D2Q8IYB1 491 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 NFATC2IPQ8NCF5 419 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 MSANTD4Q8NCY6 345 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 NCOA7Q8NI08 942 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 LRRC59Q96AG4 307 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 PANX2Q96RD6 677 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 JRKLQ9Y4A0 524 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 ZNF18P17022 549 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 IL15P40933 162 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 SSR1P43307 286 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 LMAN1P49257 510 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 PNOCQ13519 176 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 SWT1Q5T5J6 900 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 METTL16Q86W50 562 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 MLKLQ8NB16 471 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 ENOX1Q8TC92 643 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 CCDC12Q8WUD4 166 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 DHX58Q96C10 678 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 SUFUQ9UMX1 484 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 ROBO1Q9Y6N7 1651 aa12.91□□□□□ -0.34
SRGAP3-204ENST00000470951 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 MARCKSP29966 332 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 ISM2Q6H9L7 571 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms