RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 ZNF594Q96JF6 807 aaPredicted RBP11.22□□□□□ -0.61
SYNGAP1-205ENST00000470232 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
SYNGAP1-205ENST00000470232 PICK1Q9NRD5 415 aa11.22□□□□□ -0.61
SYNGAP1-205ENST00000470232 AK9Q5TCS8 1911 aa11.21□□□□□ -0.61
SYNGAP1-205ENST00000470232 RPTORQ8N122 1335 aa11.21□□□□□ -0.61
SYNGAP1-205ENST00000470232 MOGSQ13724 837 aa11.21□□□□□ -0.61
SYNGAP1-205ENST00000470232 FAM109BQ6ICB4 259 aaPredicted RBP11.21□□□□□ -0.61
SYNGAP1-205ENST00000470232 APOBEC3HQ6NTF7 200 aaKnown RBP11.21□□□□□ -0.61
SYNGAP1-205ENST00000470232 GADL1Q6ZQY3 521 aa11.21□□□□□ -0.61
SYNGAP1-205ENST00000470232 C11orf49Q9H6J7 331 aa11.21□□□□□ -0.61
SYNGAP1-205ENST00000470232 HMX1Q9NP08 348 aaPredicted RBP11.21□□□□□ -0.61
SYNGAP1-205ENST00000470232 A0A0G2JLL6 359 aaPredicted RBP11.2□□□□□ -0.62
SYNGAP1-205ENST00000470232 SYN1P17600 705 aa11.2□□□□□ -0.62
SYNGAP1-205ENST00000470232 PRRT2Q7Z6L0 340 aaPredicted RBP11.2□□□□□ -0.62
SYNGAP1-205ENST00000470232 DIS3LQ8TF46 1054 aaKnown RBP11.2□□□□□ -0.62
SYNGAP1-205ENST00000470232 C9orf78Q9NZ63 289 aaPredicted RBP11.2□□□□□ -0.62
SYNGAP1-205ENST00000470232 PNMA3Q9UL41 463 aa11.2□□□□□ -0.62
SYNGAP1-205ENST00000470232 IQSEC3Q9UPP2 1182 aaPredicted RBP11.2□□□□□ -0.62
SYNGAP1-205ENST00000470232 ZHX2Q9Y6X8 837 aa11.2□□□□□ -0.62
SYNGAP1-205ENST00000470232 A0A1B0GUL6 1792 aa11.19□□□□□ -0.62
SYNGAP1-205ENST00000470232 HMGCRP04035 888 aa11.19□□□□□ -0.62
SYNGAP1-205ENST00000470232 GRIK5Q16478 980 aa11.19□□□□□ -0.62
SYNGAP1-205ENST00000470232 PRDM6Q9NQX0 595 aa11.19□□□□□ -0.62
SYNGAP1-205ENST00000470232 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
SYNGAP1-205ENST00000470232 GRM8O00222 908 aa11.18□□□□□ -0.62
SYNGAP1-205ENST00000470232 TCP10Q12799 353 aa11.18□□□□□ -0.62
SYNGAP1-205ENST00000470232 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
SYNGAP1-205ENST00000470232 WDR66Q8TBY9 1149 aa11.18□□□□□ -0.62
SYNGAP1-205ENST00000470232 SYMPKQ92797 1274 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-205ENST00000470232 TSR2Q969E8 191 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-205ENST00000470232 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-205ENST00000470232 CACNA1FO60840 1977 aa11.17□□□□□ -0.62
SYNGAP1-205ENST00000470232 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
SYNGAP1-205ENST00000470232 PABPC4Q13310 644 aaKnown RBP eCLIP11.17□□□□□ -0.62
SYNGAP1-205ENST00000470232 FAM110CQ1W6H9 321 aa11.17□□□□□ -0.62
SYNGAP1-205ENST00000470232 METTL24Q5JXM2 366 aa11.17□□□□□ -0.62
SYNGAP1-205ENST00000470232 BEND3Q5T5X7 828 aa11.17□□□□□ -0.62
SYNGAP1-205ENST00000470232 ANKRD13CQ8N6S4 541 aa11.17□□□□□ -0.62
SYNGAP1-205ENST00000470232 OGDHLQ9ULD0 1010 aa11.17□□□□□ -0.62
SYNGAP1-205ENST00000470232 AFG3L2Q9Y4W6 797 aa11.17□□□□□ -0.62
SYNGAP1-205ENST00000470232 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
SYNGAP1-205ENST00000470232 IFIT1P09914 478 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 PTPRAP18433 802 aa11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 GCLCP48506 637 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 HNRNPUQ00839 825 aaKnown RBP eCLIP11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 EPHA10Q5JZY3 1008 aa11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 ZNF697Q5TEC3 545 aa11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 CDC42EP5Q6NZY7 148 aa11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 POTEHQ6S545 545 aa11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 LBHD1Q9BQE6 289 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 PUS3Q9BZE2 481 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 USP40Q9NVE5 1235 aa11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 AGTPBP1Q9UPW5 1226 aa11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 VCANP13611 3396 aa11.16□□□□□ -0.62
SYNGAP1-205ENST00000470232 CTNND1O60716 968 aaKnown RBP11.15□□□□□ -0.62
SYNGAP1-205ENST00000470232 ALDH1L1O75891 902 aa11.15□□□□□ -0.62
SYNGAP1-205ENST00000470232 PDE8BO95263 885 aa11.15□□□□□ -0.62
SYNGAP1-205ENST00000470232 ZSCAN29Q8IWY8 852 aaPredicted RBP11.15□□□□□ -0.62
SYNGAP1-205ENST00000470232 TRMT44Q8IYL2 757 aaKnown RBP11.15□□□□□ -0.62
SYNGAP1-205ENST00000470232 DOCK3Q8IZD9 2030 aa11.14□□□□□ -0.63
SYNGAP1-205ENST00000470232 KIF16BQ96L93 1317 aa11.14□□□□□ -0.63
SYNGAP1-205ENST00000470232 LAMA2P24043 3122 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-205ENST00000470232 PHF20L1A8MW92 1017 aa11.14□□□□□ -0.63
SYNGAP1-205ENST00000470232 MDM2Q00987 491 aaPredicted RBP11.14□□□□□ -0.63
SYNGAP1-205ENST00000470232 PROCA1Q8NCQ7 364 aaPredicted RBP11.14□□□□□ -0.63
SYNGAP1-205ENST00000470232 GUCD1Q96NT3 240 aa11.14□□□□□ -0.63
SYNGAP1-205ENST00000470232 DAGLAQ9Y4D2 1042 aa11.14□□□□□ -0.63
SYNGAP1-205ENST00000470232 TRIM75PA6NK02 468 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 F6X3S4 739 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 ENTPD3O75355 529 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 LDHBP07195 334 aaKnown RBP11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 NFIAQ12857 509 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 CCDC27Q2M243 656 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 FAM161BQ96MY7 647 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 TBC1D2Q9BYX2 928 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 SRCIN1Q9C0H9 1055 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 GNL3LQ9NVN8 582 aaKnown RBP11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 FAM198AQ9UFP1 575 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 PRKAG2Q9UGJ0 569 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 GJD2Q9UKL4 321 aa11.13□□□□□ -0.63
SYNGAP1-205ENST00000470232 IL16Q14005 1332 aa11.12□□□□□ -0.63
SYNGAP1-205ENST00000470232 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
SYNGAP1-205ENST00000470232 PUM3Q15397 648 aaKnown RBP11.12□□□□□ -0.63
SYNGAP1-205ENST00000470232 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
SYNGAP1-205ENST00000470232 MAFAQ8NHW3 353 aaPredicted RBP11.12□□□□□ -0.63
SYNGAP1-205ENST00000470232 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
SYNGAP1-205ENST00000470232 IDI2Q9BXS1 227 aa11.12□□□□□ -0.63
SYNGAP1-205ENST00000470232 DDX60LQ5H9U9 1706 aaKnown RBP11.12□□□□□ -0.63
SYNGAP1-205ENST00000470232 SPTBN5Q9NRC6 3674 aaKnown RBP11.12□□□□□ -0.63
SYNGAP1-205ENST00000470232 VAMP4O75379 141 aa11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 SLC5A1P13866 664 aa11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 CYP2B6P20813 491 aa11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 RGS3P49796 1198 aa11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 LRRC24Q50LG9 513 aa11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 SLC4A10Q6U841 1118 aa11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 WWC1Q8IX03 1113 aa11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 CCAR1Q8IX12 1150 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 SUCLG2Q96I99 432 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms