RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 APOBEC3FQ8IUX4 373 aaKnown RBP17.79■□□□□ 0.44
COL9A3-209ENST00000469852 MAPKAPK5Q8IW41 473 aa17.79■□□□□ 0.44
COL9A3-209ENST00000469852 TGFBRAP1Q8WUH2 860 aa17.79■□□□□ 0.44
COL9A3-209ENST00000469852 TMEM39BQ9GZU3 492 aa17.79■□□□□ 0.44
COL9A3-209ENST00000469852 HELLSQ9NRZ9 838 aa17.79■□□□□ 0.44
COL9A3-209ENST00000469852 TMOD2Q9NZR1 351 aa17.79■□□□□ 0.44
COL9A3-209ENST00000469852 PCNTO95613 3336 aa17.79■□□□□ 0.44
COL9A3-209ENST00000469852 FLT1P17948 1338 aa17.78■□□□□ 0.44
COL9A3-209ENST00000469852 SIPA1L1O43166 1804 aa17.78■□□□□ 0.44
COL9A3-209ENST00000469852 PLCG2P16885 1265 aa17.78■□□□□ 0.44
COL9A3-209ENST00000469852 RASA3Q14644 834 aa17.78■□□□□ 0.44
COL9A3-209ENST00000469852 MCMDC2Q4G0Z9 681 aa17.78■□□□□ 0.44
COL9A3-209ENST00000469852 SH3BP5LQ7L8J4 393 aa17.78■□□□□ 0.44
COL9A3-209ENST00000469852 DEFB129Q9H1M3 183 aa17.78■□□□□ 0.44
COL9A3-209ENST00000469852 MYH1P12882 1939 aa17.78■□□□□ 0.44
COL9A3-209ENST00000469852 HIP1O00291 1037 aa17.77■□□□□ 0.44
COL9A3-209ENST00000469852 ITGBL1O95965 494 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-209ENST00000469852 VPS53Q5VIR6 699 aa17.77■□□□□ 0.44
COL9A3-209ENST00000469852 FKBP1CQ5VVH2 108 aa17.77■□□□□ 0.44
COL9A3-209ENST00000469852 SULF1Q8IWU6 871 aa17.77■□□□□ 0.44
COL9A3-209ENST00000469852 TEPSINQ96N21 525 aa17.77■□□□□ 0.44
COL9A3-209ENST00000469852 CRNKL1Q9BZJ0 848 aaKnown RBP17.77■□□□□ 0.44
COL9A3-209ENST00000469852 EPB41L4AQ9HCS5 686 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-209ENST00000469852 MKRN1Q9UHC7 482 aaKnown RBP17.77■□□□□ 0.44
COL9A3-209ENST00000469852 SLC4A4Q9Y6R1 1079 aa17.77■□□□□ 0.44
COL9A3-209ENST00000469852 SSC5DA1L4H1 1573 aa17.77■□□□□ 0.44
COL9A3-209ENST00000469852 DDTLA6NHG4 134 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-209ENST00000469852 GSG1L2A8MUP6 293 aa17.76■□□□□ 0.43
COL9A3-209ENST00000469852 CDC45O75419 566 aa17.76■□□□□ 0.43
COL9A3-209ENST00000469852 SLURP2P0DP57 97 aa17.76■□□□□ 0.43
COL9A3-209ENST00000469852 USP5P45974 858 aa17.76■□□□□ 0.43
COL9A3-209ENST00000469852 EVX2Q03828 476 aa17.76■□□□□ 0.43
COL9A3-209ENST00000469852 SLC4A8Q2Y0W8 1093 aa17.76■□□□□ 0.43
COL9A3-209ENST00000469852 CDC37L1Q7L3B6 337 aa17.76■□□□□ 0.43
COL9A3-209ENST00000469852 FAM83AQ86UY5 434 aa17.76■□□□□ 0.43
COL9A3-209ENST00000469852 FAM151AQ8WW52 585 aa17.76■□□□□ 0.43
COL9A3-209ENST00000469852 OSBPL5Q9H0X9 879 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-209ENST00000469852 CCDC171Q6TFL3 1326 aa17.75■□□□□ 0.43
COL9A3-209ENST00000469852 ENTPD3O75355 529 aa17.75■□□□□ 0.43
COL9A3-209ENST00000469852 TNFAIP1Q13829 316 aa17.75■□□□□ 0.43
COL9A3-209ENST00000469852 CERS3Q8IU89 383 aa17.75■□□□□ 0.43
COL9A3-209ENST00000469852 CDCA5Q96FF9 252 aa17.75■□□□□ 0.43
COL9A3-209ENST00000469852 DCP1AQ9NPI6 582 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-209ENST00000469852 SAP30BPQ9UHR5 308 aaKnown RBP17.75■□□□□ 0.43
COL9A3-209ENST00000469852 SMIM22K7EJ46 135 aa17.74■□□□□ 0.43
COL9A3-209ENST00000469852 SGSM2O43147 1006 aa17.74■□□□□ 0.43
COL9A3-209ENST00000469852 NPM3O75607 178 aaKnown RBP17.74■□□□□ 0.43
COL9A3-209ENST00000469852 TNNI2P48788 182 aa17.74■□□□□ 0.43
COL9A3-209ENST00000469852 NBPF12Q5TAG4 269 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-209ENST00000469852 RPAP1Q9BWH6 1393 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-209ENST00000469852 CYP2D6P10635 497 aa17.73■□□□□ 0.43
COL9A3-209ENST00000469852 ESYT1Q9BSJ8 1104 aa17.73■□□□□ 0.43
COL9A3-209ENST00000469852 PALD1Q9ULE6 856 aa17.73■□□□□ 0.43
COL9A3-209ENST00000469852 FZD1Q9UP38 647 aa17.73■□□□□ 0.43
COL9A3-209ENST00000469852 PPP2R3BQ9Y5P8 575 aa17.73■□□□□ 0.43
COL9A3-209ENST00000469852 ATRNL1Q5VV63 1379 aa17.73■□□□□ 0.43
COL9A3-209ENST00000469852 COL2A1P02458 1487 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-209ENST00000469852 LAMB1P07942 1786 aa17.73■□□□□ 0.43
COL9A3-209ENST00000469852 TRPM7Q96QT4 1865 aa17.73■□□□□ 0.43
COL9A3-209ENST00000469852 RAD50Q92878 1312 aa17.72■□□□□ 0.43
COL9A3-209ENST00000469852 PASKQ96RG2 1323 aa17.72■□□□□ 0.43
COL9A3-209ENST00000469852 CYP2D7A0A087X1C5 515 aa17.72■□□□□ 0.43
COL9A3-209ENST00000469852 HSPD1P10809 573 aaKnown RBP17.72■□□□□ 0.43
COL9A3-209ENST00000469852 ATP8A2Q9NTI2 1148 aa17.72■□□□□ 0.43
COL9A3-209ENST00000469852 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
COL9A3-209ENST00000469852 GNAT2P19087 354 aa17.71■□□□□ 0.43
COL9A3-209ENST00000469852 PTH1RQ03431 593 aa17.71■□□□□ 0.43
COL9A3-209ENST00000469852 IFNL3Q8IZI9 196 aa17.71■□□□□ 0.43
COL9A3-209ENST00000469852 RUFY2Q8WXA3 655 aa17.71■□□□□ 0.43
COL9A3-209ENST00000469852 MCM9Q9NXL9 1143 aa17.71■□□□□ 0.43
COL9A3-209ENST00000469852 FAM196BA6NMK8 535 aa17.7■□□□□ 0.42
COL9A3-209ENST00000469852 USP17L12C9JPN9 530 aa17.7■□□□□ 0.42
COL9A3-209ENST00000469852 USP17L21D6R901 530 aa17.7■□□□□ 0.42
COL9A3-209ENST00000469852 APPP05067 770 aa17.7■□□□□ 0.42
COL9A3-209ENST00000469852 PLCD1P51178 756 aa17.7■□□□□ 0.42
COL9A3-209ENST00000469852 CTR9Q6PD62 1173 aa17.7■□□□□ 0.42
COL9A3-209ENST00000469852 ZSCAN29Q8IWY8 852 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-209ENST00000469852 CSRNP1Q96S65 589 aa17.7■□□□□ 0.42
COL9A3-209ENST00000469852 ZNF408Q9H9D4 720 aa17.7■□□□□ 0.42
COL9A3-209ENST00000469852 PAPPA2Q9BXP8 1791 aa17.69■□□□□ 0.42
COL9A3-209ENST00000469852 HSPA1AP0DMV8 641 aaKnown RBP17.69■□□□□ 0.42
COL9A3-209ENST00000469852 HSPA1BP0DMV9 641 aaKnown RBP17.69■□□□□ 0.42
COL9A3-209ENST00000469852 CST9Q5W186 159 aa17.69■□□□□ 0.42
COL9A3-209ENST00000469852 MOB2Q70IA6 237 aa17.69■□□□□ 0.42
COL9A3-209ENST00000469852 OTOFQ9HC10 1997 aa17.69■□□□□ 0.42
COL9A3-209ENST00000469852 FGAP02671 866 aa17.68■□□□□ 0.42
COL9A3-209ENST00000469852 TDO2P48775 406 aa17.68■□□□□ 0.42
COL9A3-209ENST00000469852 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
COL9A3-209ENST00000469852 PRKG1Q13976 671 aa17.68■□□□□ 0.42
COL9A3-209ENST00000469852 GIMAP6Q6P9H5 292 aa17.68■□□□□ 0.42
COL9A3-209ENST00000469852 MIGA2Q7L4E1 593 aa17.68■□□□□ 0.42
COL9A3-209ENST00000469852 LSG1Q9H089 658 aaKnown RBP17.68■□□□□ 0.42
COL9A3-209ENST00000469852 DNAJC18Q9H819 358 aa17.68■□□□□ 0.42
COL9A3-209ENST00000469852 CREBZFQ9NS37 354 aa17.68■□□□□ 0.42
COL9A3-209ENST00000469852 LAMA4Q16363 1823 aa17.68■□□□□ 0.42
COL9A3-209ENST00000469852 CELF2O95319 508 aaKnown RBP17.67■□□□□ 0.42
COL9A3-209ENST00000469852 POLR3DP05423 398 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-209ENST00000469852 C12orf60Q5U649 245 aa17.67■□□□□ 0.42
COL9A3-209ENST00000469852 CASC1Q6TDU7 716 aa17.67■□□□□ 0.42
COL9A3-209ENST00000469852 DYNLL2Q96FJ2 89 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms