RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 FLT1P17948 1338 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 NAV1Q8NEY1 1877 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 WDR90Q96KV7 1748 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 ENTPD3O75355 529 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 CTR9Q6PD62 1173 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 TEX11Q8IYF3 940 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 TGFBRAP1Q8WUH2 860 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 NAPBQ9H115 298 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 FAM198AQ9UFP1 575 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 SNX14Q9Y5W7 946 aa12.38□□□□□ -0.43
THBS3-206ENST00000469769 USP17L12C9JPN9 530 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 USP17L21D6R901 530 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 H7C1D1 291 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 EGFRP00533 1210 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 APPP05067 770 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 PCP11498 1178 aaKnown RBP12.37□□□□□ -0.43
THBS3-206ENST00000469769 NT5C2P49902 561 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 NFIAQ12857 509 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 IMMTQ16891 758 aaKnown RBP12.37□□□□□ -0.43
THBS3-206ENST00000469769 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 FAM83AQ86UY5 434 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 METTL16Q86W50 562 aaKnown RBP12.37□□□□□ -0.43
THBS3-206ENST00000469769 OSBPL5Q9H0X9 879 aaPredicted RBP12.37□□□□□ -0.43
THBS3-206ENST00000469769 TDRD3Q9H7E2 651 aaKnown RBP12.37□□□□□ -0.43
THBS3-206ENST00000469769 DDX4Q9NQI0 724 aaKnown RBP12.37□□□□□ -0.43
THBS3-206ENST00000469769 ARPP21Q9UBL0 812 aaPredicted RBP12.37□□□□□ -0.43
THBS3-206ENST00000469769 ZNF70Q9UC06 446 aaPredicted RBP12.37□□□□□ -0.43
THBS3-206ENST00000469769 PGAP2Q9UHJ9 254 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 TAF6LQ9Y6J9 622 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 ATRNL1Q5VV63 1379 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 ROBO3Q96MS0 1386 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 LAMB1P07942 1786 aa12.37□□□□□ -0.43
THBS3-206ENST00000469769 ZNF213O14771 459 aa12.36□□□□□ -0.43
THBS3-206ENST00000469769 ZKSCAN1P17029 563 aaPredicted RBP12.36□□□□□ -0.43
THBS3-206ENST00000469769 EPS15P42566 896 aa12.36□□□□□ -0.43
THBS3-206ENST00000469769 USP5P45974 858 aa12.36□□□□□ -0.43
THBS3-206ENST00000469769 RBM5P52756 815 aaKnown RBP eCLIP12.36□□□□□ -0.43
THBS3-206ENST00000469769 GABPAQ06546 454 aa12.36□□□□□ -0.43
THBS3-206ENST00000469769 KRT32Q14532 448 aa12.36□□□□□ -0.43
THBS3-206ENST00000469769 NBPF9Q3BBW0 867 aa12.36□□□□□ -0.43
THBS3-206ENST00000469769 SAMD7Q7Z3H4 446 aa12.36□□□□□ -0.43
THBS3-206ENST00000469769 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
THBS3-206ENST00000469769 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
THBS3-206ENST00000469769 ADARB2Q9NS39 739 aaKnown RBP12.36□□□□□ -0.43
THBS3-206ENST00000469769 CNTNAP1P78357 1384 aa12.35□□□□□ -0.43
THBS3-206ENST00000469769 POTECB2RU33 542 aa12.35□□□□□ -0.43
THBS3-206ENST00000469769 TDO2P48775 406 aa12.35□□□□□ -0.43
THBS3-206ENST00000469769 HIRAP54198 1017 aaPredicted RBP12.35□□□□□ -0.43
THBS3-206ENST00000469769 PPARAQ07869 468 aa12.35□□□□□ -0.43
THBS3-206ENST00000469769 KIF4BQ2VIQ3 1234 aa12.35□□□□□ -0.43
THBS3-206ENST00000469769 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
THBS3-206ENST00000469769 STOX1Q6ZVD7 989 aa12.35□□□□□ -0.43
THBS3-206ENST00000469769 MAPKAPK5Q8IW41 473 aa12.35□□□□□ -0.43
THBS3-206ENST00000469769 DHX36Q9H2U1 1008 aaKnown RBP12.35□□□□□ -0.43
THBS3-206ENST00000469769 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
THBS3-206ENST00000469769 TACC3Q9Y6A5 838 aa12.35□□□□□ -0.43
THBS3-206ENST00000469769 SIPA1L1O43166 1804 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 POLR2AP24928 1970 aaKnown RBP12.34□□□□□ -0.43
THBS3-206ENST00000469769 E7EWF7 191 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 MYO1BO43795 1136 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 PLCD1P51178 756 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 MAP3K10Q02779 954 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 RABEP1Q15276 862 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 AKNAD1Q5T1N1 836 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 SH3BP5LQ7L8J4 393 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 TBC1D10CQ8IV04 446 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 TRPM4Q8TD43 1214 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 FAM151AQ8WW52 585 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 EHD4Q9H223 541 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
THBS3-206ENST00000469769 MCM9Q9NXL9 1143 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
THBS3-206ENST00000469769 RBM19Q9Y4C8 960 aaKnown RBP12.34□□□□□ -0.43
THBS3-206ENST00000469769 PITPNM2Q9BZ72 1349 aa12.34□□□□□ -0.43
THBS3-206ENST00000469769 SMIM22K7EJ46 135 aa12.33□□□□□ -0.44
THBS3-206ENST00000469769 ORC4O43929 436 aa12.33□□□□□ -0.44
THBS3-206ENST00000469769 HMGB1P09429 215 aaKnown RBP12.33□□□□□ -0.44
THBS3-206ENST00000469769 PSMA5P28066 241 aa12.33□□□□□ -0.44
THBS3-206ENST00000469769 LMOD1P29536 600 aaPredicted RBP12.33□□□□□ -0.44
THBS3-206ENST00000469769 TBC1D10BQ4KMP7 808 aaPredicted RBP12.33□□□□□ -0.44
THBS3-206ENST00000469769 COL13A1Q5TAT6 717 aaPredicted RBP12.33□□□□□ -0.44
THBS3-206ENST00000469769 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
THBS3-206ENST00000469769 TTC6Q86TZ1 520 aa12.33□□□□□ -0.44
THBS3-206ENST00000469769 ZFPM1Q8IX07 1006 aa12.33□□□□□ -0.44
THBS3-206ENST00000469769 ZC3H15Q8WU90 426 aaKnown RBP12.33□□□□□ -0.44
THBS3-206ENST00000469769 NEK1Q96PY6 1258 aa12.33□□□□□ -0.44
THBS3-206ENST00000469769 RNF41Q9H4P4 317 aaPredicted RBP12.33□□□□□ -0.44
THBS3-206ENST00000469769 TMOD2Q9NZR1 351 aa12.33□□□□□ -0.44
THBS3-206ENST00000469769 HACL1Q9UJ83 578 aa12.33□□□□□ -0.44
THBS3-206ENST00000469769 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
THBS3-206ENST00000469769 CYP2D7A0A087X1C5 515 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 CLRN2A0PK11 232 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 IQCA1LA6NCM1 817 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 DDTLA6NHG4 134 aaPredicted RBP12.32□□□□□ -0.44
THBS3-206ENST00000469769 CYP2D6P10635 497 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 CACNB3P54284 484 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 HAND2P61296 217 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms