RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 REV3LO60673 3130 aa16.1■□□□□ 0.17
HDAC6-217ENST00000469223 IFIT5Q13325 482 aaKnown RBP16.09■□□□□ 0.17
HDAC6-217ENST00000469223 GCKRQ14397 625 aa16.09■□□□□ 0.17
HDAC6-217ENST00000469223 FAM110CQ1W6H9 321 aa16.09■□□□□ 0.17
HDAC6-217ENST00000469223 APOBEC3HQ6NTF7 200 aaKnown RBP16.09■□□□□ 0.17
HDAC6-217ENST00000469223 SLC45A1Q9Y2W3 748 aa16.09■□□□□ 0.17
HDAC6-217ENST00000469223 RLFQ13129 1914 aa16.08■□□□□ 0.16
HDAC6-217ENST00000469223 TCP10Q12799 353 aa16.08■□□□□ 0.16
HDAC6-217ENST00000469223 ZNF594Q96JF6 807 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-217ENST00000469223 FAM84BQ96KN1 310 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-217ENST00000469223 ZHX2Q9Y6X8 837 aa16.08■□□□□ 0.16
HDAC6-217ENST00000469223 C9orf50Q5SZB4 431 aa16.07■□□□□ 0.16
HDAC6-217ENST00000469223 MAP3K21Q5TCX8 1036 aa16.07■□□□□ 0.16
HDAC6-217ENST00000469223 CCDC30Q5VVM6 783 aa16.07■□□□□ 0.16
HDAC6-217ENST00000469223 C8orf58Q8NAV2 365 aa16.07■□□□□ 0.16
HDAC6-217ENST00000469223 FAM151AQ8WW52 585 aa16.07■□□□□ 0.16
HDAC6-217ENST00000469223 TCF20Q9UGU0 1960 aaKnown RBP16.06■□□□□ 0.16
HDAC6-217ENST00000469223 ZNF853P0CG23 659 aa16.06■□□□□ 0.16
HDAC6-217ENST00000469223 SHHQ15465 462 aa16.06■□□□□ 0.16
HDAC6-217ENST00000469223 TAF7LQ5H9L4 462 aa16.06■□□□□ 0.16
HDAC6-217ENST00000469223 SCYL3Q8IZE3 742 aa16.06■□□□□ 0.16
HDAC6-217ENST00000469223 PICK1Q9NRD5 415 aa16.06■□□□□ 0.16
HDAC6-217ENST00000469223 CNNM1Q9NRU3 951 aa16.06■□□□□ 0.16
HDAC6-217ENST00000469223 CACNA1FO60840 1977 aa16.06■□□□□ 0.16
HDAC6-217ENST00000469223 ATRNL1Q5VV63 1379 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 MAST3O60307 1309 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 TRIM75PA6NK02 468 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 PTPRAP18433 802 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 SMAD3P84022 425 aaKnown RBP16.05■□□□□ 0.16
HDAC6-217ENST00000469223 TREML2Q5T2D2 321 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 LDHAL6AQ6ZMR3 332 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 TBC1D22AQ8WUA7 517 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 MYH16Q9H6N6 1097 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 GJD2Q9UKL4 321 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 AGTPBP1Q9UPW5 1226 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 AFG3L2Q9Y4W6 797 aa16.05■□□□□ 0.16
HDAC6-217ENST00000469223 XIRP2A4UGR9 3374 aa16.04■□□□□ 0.16
HDAC6-217ENST00000469223 CACNA1AO00555 2505 aa16.04■□□□□ 0.16
HDAC6-217ENST00000469223 NFIAQ12857 509 aa16.04■□□□□ 0.16
HDAC6-217ENST00000469223 UBE4AQ14139 1066 aa16.04■□□□□ 0.16
HDAC6-217ENST00000469223 G2E3Q7L622 706 aa16.04■□□□□ 0.16
HDAC6-217ENST00000469223 ADAMTS19Q8TE59 1207 aa16.04■□□□□ 0.16
HDAC6-217ENST00000469223 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-217ENST00000469223 PNMA3Q9UL41 463 aa16.04■□□□□ 0.16
HDAC6-217ENST00000469223 SYNGAP1Q96PV0 1343 aa16.03■□□□□ 0.16
HDAC6-217ENST00000469223 FRAT2O75474 233 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-217ENST00000469223 CYP2B6P20813 491 aa16.03■□□□□ 0.16
HDAC6-217ENST00000469223 FOXO4P98177 505 aa16.03■□□□□ 0.16
HDAC6-217ENST00000469223 CCDC84Q86UT8 332 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-217ENST00000469223 VPS37DQ86XT2 251 aa16.03■□□□□ 0.16
HDAC6-217ENST00000469223 RUNDC1Q96C34 613 aa16.03■□□□□ 0.16
HDAC6-217ENST00000469223 IFT57Q9NWB7 429 aa16.03■□□□□ 0.16
HDAC6-217ENST00000469223 PRKAG2Q9UGJ0 569 aa16.03■□□□□ 0.16
HDAC6-217ENST00000469223 MYH2Q9UKX2 1941 aa16.03■□□□□ 0.16
HDAC6-217ENST00000469223 CHD7Q9P2D1 2997 aa16.02■□□□□ 0.16
HDAC6-217ENST00000469223 CCND3P30281 292 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-217ENST00000469223 ATN1P54259 1190 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-217ENST00000469223 LHX8Q68G74 356 aa16.02■□□□□ 0.16
HDAC6-217ENST00000469223 UHRF1Q96T88 793 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-217ENST00000469223 PHF20L1A8MW92 1017 aa16.01■□□□□ 0.15
HDAC6-217ENST00000469223 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-217ENST00000469223 GNAI1P63096 354 aa16.01■□□□□ 0.15
HDAC6-217ENST00000469223 CACNB2Q08289 660 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-217ENST00000469223 CCDC57Q2TAC2 916 aa16.01■□□□□ 0.15
HDAC6-217ENST00000469223 HHIPL2Q6UWX4 724 aa16.01■□□□□ 0.15
HDAC6-217ENST00000469223 LMBR1LQ6UX01 489 aa16.01■□□□□ 0.15
HDAC6-217ENST00000469223 TSPYL6Q8N831 410 aa16.01■□□□□ 0.15
HDAC6-217ENST00000469223 STK31Q9BXU1 1019 aa16.01■□□□□ 0.15
HDAC6-217ENST00000469223 SENP6Q9GZR1 1112 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-217ENST00000469223 FAM198AQ9UFP1 575 aa16.01■□□□□ 0.15
HDAC6-217ENST00000469223 RTP1P59025 263 aa16■□□□□ 0.15
HDAC6-217ENST00000469223 GRIN2CQ14957 1233 aa16■□□□□ 0.15
HDAC6-217ENST00000469223 EPHA10Q5JZY3 1008 aa16■□□□□ 0.15
HDAC6-217ENST00000469223 CDC42EP5Q6NZY7 148 aa16■□□□□ 0.15
HDAC6-217ENST00000469223 MRIQ9BWK5 157 aa16■□□□□ 0.15
HDAC6-217ENST00000469223 DAGLAQ9Y4D2 1042 aa16■□□□□ 0.15
HDAC6-217ENST00000469223 TRANK1O15050 2925 aa16■□□□□ 0.15
HDAC6-217ENST00000469223 GCLCP48506 637 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-217ENST00000469223 FBXO33Q7Z6M2 555 aa15.99■□□□□ 0.15
HDAC6-217ENST00000469223 ZFPM1Q8IX07 1006 aa15.99■□□□□ 0.15
HDAC6-217ENST00000469223 LINS1Q8NG48 757 aa15.99■□□□□ 0.15
HDAC6-217ENST00000469223 CHMP4AQ9BY43 222 aa15.99■□□□□ 0.15
HDAC6-217ENST00000469223 PRDM5Q9NQX1 630 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-217ENST00000469223 THEGQ9P2T0 379 aa15.99■□□□□ 0.15
HDAC6-217ENST00000469223 PLXNA1Q9UIW2 1896 aa15.99■□□□□ 0.15
HDAC6-217ENST00000469223 SLURP2P0DP57 97 aa15.98■□□□□ 0.15
HDAC6-217ENST00000469223 DIXDC1Q155Q3 683 aa15.98■□□□□ 0.15
HDAC6-217ENST00000469223 PPM1EQ8WY54 764 aa15.98■□□□□ 0.15
HDAC6-217ENST00000469223 PUS3Q9BZE2 481 aaKnown RBP15.98■□□□□ 0.15
HDAC6-217ENST00000469223 ATP11BQ9Y2G3 1177 aa15.98■□□□□ 0.15
HDAC6-217ENST00000469223 HCN4Q9Y3Q4 1203 aa15.98■□□□□ 0.15
HDAC6-217ENST00000469223 LRRFIP2Q9Y608 721 aaKnown RBP15.98■□□□□ 0.15
HDAC6-217ENST00000469223 CCL14Q16627 93 aa15.97■□□□□ 0.15
HDAC6-217ENST00000469223 PROCA1Q8NCQ7 364 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-217ENST00000469223 ATXN2LQ8WWM7 1075 aaKnown RBP15.97■□□□□ 0.15
HDAC6-217ENST00000469223 SOCS4Q8WXH5 440 aa15.97■□□□□ 0.15
HDAC6-217ENST00000469223 DNAAF4Q8WXU2 420 aa15.97■□□□□ 0.15
HDAC6-217ENST00000469223 BADQ92934 168 aa15.97■□□□□ 0.15
HDAC6-217ENST00000469223 ASB2Q96Q27 587 aa15.97■□□□□ 0.15
HDAC6-217ENST00000469223 SUGT1Q9Y2Z0 365 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms