RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ALYREFQ86V81 257 aaKnown RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 CCDC191Q8NCU4 936 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 GAS2L2Q8NHY3 880 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 ZNF594Q96JF6 807 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 HSH2DQ96JZ2 352 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 KIF2CQ99661 725 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 NEUROD4Q9HD90 331 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 POLKQ9UBT6 870 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 RRP15Q9Y3B9 282 aaKnown RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 HCN4Q9Y3Q4 1203 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 LRRFIP2Q9Y608 721 aaKnown RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 PRDM15P57071 1507 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 ERCC6L2Q5T890 1561 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 ERBINQ96RT1 1412 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 A0A087WUV0 522 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-207ENST00000468925 ANKRD62A6NC57 917 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 KLHL33A6NCF5 533 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 USP17L3A6NCW0 530 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 USP17L4A6NCW7 530 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 C1QTNF9BB2RNN3 333 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 C21orf2O43822 256 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 FAM157BP0CG42 384 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 NOS2P35228 1153 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 GSDMDP57764 484 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 ANAPC15P60006 121 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 ZC3H6P61129 1189 aaKnown RBP5.66□□□□□ -1.5
SF3B1-207ENST00000468925 TPD52L1Q16890 204 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-207ENST00000468925 C11orf91Q3C1V1 193 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 CT47A1Q5JQC4 288 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-207ENST00000468925 HDGFL1Q5TGJ6 251 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 USP17L2Q6R6M4 530 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 SYT10Q6XYQ8 523 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 ILDR2Q71H61 639 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 USP17L1Q7RTZ2 530 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 CHD1LQ86WJ1 897 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 FAM200AQ8TCP9 573 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 RHPN1Q8TCX5 695 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 FBXO41Q8TF61 875 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 UCN2Q96RP3 112 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 TMX4Q9H1E5 349 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-207ENST00000468925 TSPAN10Q9H1Z9 355 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-207ENST00000468925 ACBD3Q9H3P7 528 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 SEMA6BQ9H3T3 888 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 TTC12Q9H892 705 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-207ENST00000468925 L2HGDHQ9H9P8 463 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 IFT57Q9NWB7 429 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 MARK1Q9P0L2 795 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 KCNG1Q9UIX4 513 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 SUFUQ9UMX1 484 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 TRPM1Q7Z4N2 1603 aa5.66□□□□□ -1.5
SF3B1-207ENST00000468925 POLR3AO14802 1390 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-207ENST00000468925 CHD1O14646 1710 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 HECW2Q9P2P5 1572 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 H0YHG0 523 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 CTAGE5O15320 804 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 CHRNA4P43681 627 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 CORO7P57737 925 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 CLDN10P78369 228 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 TBC1D8BQ0IIM8 1120 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 SFSWAPQ12872 951 aaKnown RBP5.65□□□□□ -1.5
SF3B1-207ENST00000468925 CUL4AQ13619 759 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 CCDC158Q5M9N0 1113 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 ZNF468Q5VIY5 522 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-207ENST00000468925 CCDC30Q5VVM6 783 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 CCDC102BQ68D86 513 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 SYT9Q86SS6 491 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 SPATS2Q86XZ4 545 aaKnown RBP5.65□□□□□ -1.5
SF3B1-207ENST00000468925 C10orf67Q8IYJ2 551 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 OTUD6BQ8N6M0 293 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 PANK1Q8TE04 598 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 DNAAF4Q8WXU2 420 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 ITFG2Q969R8 447 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 IL17RAQ96F46 866 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 BCL2L13Q9BXK5 485 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 PPP1R12CQ9BZL4 782 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 UBXN6Q9BZV1 441 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 ATG3Q9NT62 314 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 MRVI1Q9Y6F6 885 aa5.65□□□□□ -1.5
SF3B1-207ENST00000468925 IL16Q14005 1332 aa5.65□□□□□ -1.51
SF3B1-207ENST00000468925 KIF24Q5T7B8 1368 aa5.65□□□□□ -1.51
SF3B1-207ENST00000468925 PRAG1Q86YV5 1406 aa5.65□□□□□ -1.51
SF3B1-207ENST00000468925 ATP10AO60312 1499 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 PLA2R1Q13018 1463 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 ABCC10Q5T3U5 1492 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 KDM6BO15054 1643 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 SERTM1A2A2V5 107 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 SFI1A8K8P3 1242 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 FAM229AH3BQW9 127 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 ZRANB2O95218 330 aaKnown RBP eCLIP5.64□□□□□ -1.51
SF3B1-207ENST00000468925 SMC2O95347 1197 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 PNMA6AP0CW24 399 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-207ENST00000468925 EPHA4P54764 986 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 ICA1Q05084 483 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 TUBB2AQ13885 445 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 SETDB1Q15047 1291 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 TEAD4Q15561 434 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 FBXO38Q6PIJ6 1188 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 CD163Q86VB7 1156 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 ANKRD18AQ8IVF6 992 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 OGFOD1Q8N543 542 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms