RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 SLC23A3Q6PIS1 610 aa7.06□□□□□ -1.28
SSB-208ENST00000468600 ZSWIM9Q86XI8 627 aa7.06□□□□□ -1.28
SSB-208ENST00000468600 FLAD1Q8NFF5 587 aa7.06□□□□□ -1.28
SSB-208ENST00000468600 C1orf115Q9H7X2 142 aa7.06□□□□□ -1.28
SSB-208ENST00000468600 U3KQE9 123 aa7.06□□□□□ -1.28
SSB-208ENST00000468600 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.05□□□□□ -1.28
SSB-208ENST00000468600 RNGTTO60942 597 aaKnown RBP7.05□□□□□ -1.28
SSB-208ENST00000468600 ABL1P00519 1130 aa7.05□□□□□ -1.28
SSB-208ENST00000468600 PTPN12Q05209 780 aaKnown RBP7.05□□□□□ -1.28
SSB-208ENST00000468600 MLANAQ16655 118 aa7.05□□□□□ -1.28
SSB-208ENST00000468600 EGFL7Q9UHF1 273 aa7.05□□□□□ -1.28
SSB-208ENST00000468600 KCNMB1Q16558 191 aa7.04□□□□□ -1.28
SSB-208ENST00000468600 CCDC86Q9H6F5 360 aaKnown RBP7.04□□□□□ -1.28
SSB-208ENST00000468600 KRT1P04264 644 aa7.03□□□□□ -1.28
SSB-208ENST00000468600 ITIH2P19823 946 aa7.03□□□□□ -1.28
SSB-208ENST00000468600 OXCT1P55809 520 aa7.03□□□□□ -1.28
SSB-208ENST00000468600 TTLL4Q14679 1199 aa7.03□□□□□ -1.28
SSB-208ENST00000468600 RPS26P11Q5JNZ5 115 aaPredicted RBP7.03□□□□□ -1.28
SSB-208ENST00000468600 PPP1R16BQ96T49 567 aa7.03□□□□□ -1.28
SSB-208ENST00000468600 DUSP23Q9BVJ7 150 aa7.03□□□□□ -1.28
SSB-208ENST00000468600 ZC3H12CQ9C0D7 883 aaKnown RBP7.03□□□□□ -1.28
SSB-208ENST00000468600 NPHS2Q9NP85 383 aa7.03□□□□□ -1.28
SSB-208ENST00000468600 KRT82Q9NSB4 513 aa7.03□□□□□ -1.28
SSB-208ENST00000468600 PCOLCE2Q9UKZ9 415 aa7.03□□□□□ -1.28
SSB-208ENST00000468600 USTQ9Y2C2 406 aa7.03□□□□□ -1.28
SSB-208ENST00000468600 LEFTY1O75610 366 aa7.02□□□□□ -1.29
SSB-208ENST00000468600 HCLS1P14317 486 aaPredicted RBP7.02□□□□□ -1.29
SSB-208ENST00000468600 ZNF211Q13398 564 aaPredicted RBP7.02□□□□□ -1.29
SSB-208ENST00000468600 KIF4BQ2VIQ3 1234 aa7.02□□□□□ -1.29
SSB-208ENST00000468600 USPL1Q5W0Q7 1092 aa7.02□□□□□ -1.29
SSB-208ENST00000468600 WDR89Q96FK6 387 aaPredicted RBP7.02□□□□□ -1.29
SSB-208ENST00000468600 SSU72Q9NP77 194 aaKnown RBP7.02□□□□□ -1.29
SSB-208ENST00000468600 SNX11Q9Y5W9 270 aa7.02□□□□□ -1.29
SSB-208ENST00000468600 ICMTO60725 284 aa7.01□□□□□ -1.29
SSB-208ENST00000468600 CPNE3O75131 537 aaKnown RBP7.01□□□□□ -1.29
SSB-208ENST00000468600 B4GALNT3Q6L9W6 998 aa7.01□□□□□ -1.29
SSB-208ENST00000468600 TOP6BLQ8N6T0 577 aa7.01□□□□□ -1.29
SSB-208ENST00000468600 ASB11Q8WXH4 323 aa7.01□□□□□ -1.29
SSB-208ENST00000468600 LIN37Q96GY3 246 aaPredicted RBP7.01□□□□□ -1.29
SSB-208ENST00000468600 ABCB6Q9NP58 842 aa7.01□□□□□ -1.29
SSB-208ENST00000468600 ANO2Q9NQ90 1003 aa7.01□□□□□ -1.29
SSB-208ENST00000468600 DISC1Q9NRI5 854 aa7.01□□□□□ -1.29
SSB-208ENST00000468600 BRPF3Q9ULD4 1205 aa7.01□□□□□ -1.29
SSB-208ENST00000468600 PLAGL2Q9UPG8 496 aa7.01□□□□□ -1.29
SSB-208ENST00000468600 ZNF862O60290 1169 aa7□□□□□ -1.29
SSB-208ENST00000468600 GSTP1P09211 210 aaKnown RBP7□□□□□ -1.29
SSB-208ENST00000468600 INHBBP09529 407 aa7□□□□□ -1.29
SSB-208ENST00000468600 IKZF1Q13422 519 aa7□□□□□ -1.29
SSB-208ENST00000468600 PRPF40BQ6NWY9 871 aaKnown RBP7□□□□□ -1.29
SSB-208ENST00000468600 ANKLE2Q86XL3 938 aa7□□□□□ -1.29
SSB-208ENST00000468600 CARNS1A5YM72 827 aa6.99□□□□□ -1.29
SSB-208ENST00000468600 ZNF157P51786 506 aaPredicted RBP6.99□□□□□ -1.29
SSB-208ENST00000468600 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.99□□□□□ -1.29
SSB-208ENST00000468600 TNKS2Q9H2K2 1166 aa6.99□□□□□ -1.29
SSB-208ENST00000468600 PRDM7Q9NQW5 492 aa6.99□□□□□ -1.29
SSB-208ENST00000468600 TRAK1Q9UPV9 953 aa6.99□□□□□ -1.29
SSB-208ENST00000468600 PCDHGC5Q9Y5F6 944 aa6.99□□□□□ -1.29
SSB-208ENST00000468600 TMEM238LA0A1B0GVL6 79 aa6.98□□□□□ -1.29
SSB-208ENST00000468600 GADD45BO75293 160 aaPredicted RBP6.98□□□□□ -1.29
SSB-208ENST00000468600 C1QTNF9P0C862 333 aa6.98□□□□□ -1.29
SSB-208ENST00000468600 ZP2Q05996 745 aa6.98□□□□□ -1.29
SSB-208ENST00000468600 PDE3BQ13370 1112 aa6.98□□□□□ -1.29
SSB-208ENST00000468600 SYDE1Q6ZW31 735 aaPredicted RBP6.98□□□□□ -1.29
SSB-208ENST00000468600 AMIGO3Q86WK7 504 aa6.98□□□□□ -1.29
SSB-208ENST00000468600 KCNB2Q92953 911 aa6.98□□□□□ -1.29
SSB-208ENST00000468600 GTF2IRD1Q9UHL9 959 aa6.98□□□□□ -1.29
SSB-208ENST00000468600 NDUFB5O43674 189 aa6.97□□□□□ -1.29
SSB-208ENST00000468600 AFMP43652 599 aa6.97□□□□□ -1.29
SSB-208ENST00000468600 PPP2R3AQ06190 1150 aa6.97□□□□□ -1.29
SSB-208ENST00000468600 ORC1Q13415 861 aa6.97□□□□□ -1.29
SSB-208ENST00000468600 ISL2Q96A47 359 aa6.97□□□□□ -1.29
SSB-208ENST00000468600 GPN3Q9UHW5 284 aaPredicted RBP6.97□□□□□ -1.29
SSB-208ENST00000468600 CTSWP56202 376 aa6.96□□□□□ -1.3
SSB-208ENST00000468600 FAAP100Q0VG06 881 aa6.96□□□□□ -1.3
SSB-208ENST00000468600 MPZL3Q6UWV2 235 aa6.96□□□□□ -1.3
SSB-208ENST00000468600 PRR23BQ6ZRT6 265 aa6.96□□□□□ -1.3
SSB-208ENST00000468600 CITED4Q96RK1 184 aa6.96□□□□□ -1.3
SSB-208ENST00000468600 CTNND2Q9UQB3 1225 aa6.96□□□□□ -1.3
SSB-208ENST00000468600 NEFMP07197 916 aa6.95□□□□□ -1.3
SSB-208ENST00000468600 ARHGAP4P98171 946 aa6.95□□□□□ -1.3
SSB-208ENST00000468600 FYB2Q5VWT5 728 aa6.95□□□□□ -1.3
SSB-208ENST00000468600 GLYCTKQ8IVS8 523 aa6.95□□□□□ -1.3
SSB-208ENST00000468600 RNF214Q8ND24 703 aa6.95□□□□□ -1.3
SSB-208ENST00000468600 C20orf173Q96LM9 149 aa6.95□□□□□ -1.3
SSB-208ENST00000468600 FAM129BQ96TA1 746 aa6.95□□□□□ -1.3
SSB-208ENST00000468600 GNAT3A8MTJ3 354 aa6.94□□□□□ -1.3
SSB-208ENST00000468600 H3BRB1 525 aa6.94□□□□□ -1.3
SSB-208ENST00000468600 IGF2BP3O00425 579 aaKnown RBP eCLIP6.94□□□□□ -1.3
SSB-208ENST00000468600 GLI1P08151 1106 aa6.94□□□□□ -1.3
SSB-208ENST00000468600 ERVK-24P63145 666 aa6.94□□□□□ -1.3
SSB-208ENST00000468600 DTHD1Q6ZMT9 781 aa6.94□□□□□ -1.3
SSB-208ENST00000468600 SPACA3Q8IXA5 215 aa6.94□□□□□ -1.3
SSB-208ENST00000468600 CCDC74AQ96AQ1 378 aa6.94□□□□□ -1.3
SSB-208ENST00000468600 HEXIM2Q96MH2 286 aaKnown RBP6.94□□□□□ -1.3
SSB-208ENST00000468600 DNAJC25Q9H1X3 360 aa6.94□□□□□ -1.3
SSB-208ENST00000468600 TUT1Q9H6E5 874 aaKnown RBP6.94□□□□□ -1.3
SSB-208ENST00000468600 TMEM39AQ9NV64 488 aa6.94□□□□□ -1.3
SSB-208ENST00000468600 SERPINB4P48594 390 aa6.93□□□□□ -1.3
SSB-208ENST00000468600 CLCN7P51798 805 aa6.93□□□□□ -1.3
SSB-208ENST00000468600 KIRREL1Q96J84 757 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms