RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 FAM198AQ9UFP1 575 aa18.21■□□□□ 0.51
SNIP1-202ENST00000468040 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
SNIP1-202ENST00000468040 CDK5RAP2Q96SN8 1893 aa18.2■□□□□ 0.5
SNIP1-202ENST00000468040 CNTNAP1P78357 1384 aa18.2■□□□□ 0.5
SNIP1-202ENST00000468040 PRKAB2O43741 272 aa18.2■□□□□ 0.5
SNIP1-202ENST00000468040 EIF5BO60841 1220 aaKnown RBP18.2■□□□□ 0.5
SNIP1-202ENST00000468040 APPP05067 770 aa18.2■□□□□ 0.5
SNIP1-202ENST00000468040 TCP10Q12799 353 aa18.2■□□□□ 0.5
SNIP1-202ENST00000468040 RASA3Q14644 834 aa18.2■□□□□ 0.5
SNIP1-202ENST00000468040 CHADLQ6NUI6 762 aa18.2■□□□□ 0.5
SNIP1-202ENST00000468040 KIAA1211Q6ZU35 1233 aa18.2■□□□□ 0.5
SNIP1-202ENST00000468040 MAPKAPK5Q8IW41 473 aa18.2■□□□□ 0.5
SNIP1-202ENST00000468040 OSBPL5Q9H0X9 879 aaPredicted RBP18.2■□□□□ 0.5
SNIP1-202ENST00000468040 IL25Q9H293 177 aa18.2■□□□□ 0.5
SNIP1-202ENST00000468040 DCP1AQ9NPI6 582 aaPredicted RBP18.2■□□□□ 0.5
SNIP1-202ENST00000468040 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
SNIP1-202ENST00000468040 GSG1L2A8MUP6 293 aa18.19■□□□□ 0.5
SNIP1-202ENST00000468040 HSPD1P10809 573 aaKnown RBP18.19■□□□□ 0.5
SNIP1-202ENST00000468040 MAP1SQ66K74 1059 aaPredicted RBP18.19■□□□□ 0.5
SNIP1-202ENST00000468040 AMOTL1Q8IY63 956 aa18.19■□□□□ 0.5
SNIP1-202ENST00000468040 DHX36Q9H2U1 1008 aaKnown RBP18.19■□□□□ 0.5
SNIP1-202ENST00000468040 MKRN1Q9UHC7 482 aaKnown RBP18.19■□□□□ 0.5
SNIP1-202ENST00000468040 ATRNL1Q5VV63 1379 aa18.18■□□□□ 0.5
SNIP1-202ENST00000468040 NAV1Q8NEY1 1877 aa18.18■□□□□ 0.5
SNIP1-202ENST00000468040 TOMM70O94826 608 aa18.18■□□□□ 0.5
SNIP1-202ENST00000468040 TDO2P48775 406 aa18.18■□□□□ 0.5
SNIP1-202ENST00000468040 VPS53Q5VIR6 699 aa18.18■□□□□ 0.5
SNIP1-202ENST00000468040 ZSCAN29Q8IWY8 852 aaPredicted RBP18.18■□□□□ 0.5
SNIP1-202ENST00000468040 DSCC1Q9BVC3 393 aa18.18■□□□□ 0.5
SNIP1-202ENST00000468040 ARPP21Q9UBL0 812 aaPredicted RBP18.18■□□□□ 0.5
SNIP1-202ENST00000468040 ADM5C9JUS6 153 aa18.17■□□□□ 0.5
SNIP1-202ENST00000468040 USP48Q86UV5 1035 aa18.17■□□□□ 0.5
SNIP1-202ENST00000468040 IFNL3Q8IZI9 196 aa18.17■□□□□ 0.5
SNIP1-202ENST00000468040 SMC1BQ8NDV3 1235 aa18.17■□□□□ 0.5
SNIP1-202ENST00000468040 RBM46Q8TBY0 533 aaKnown RBP18.17■□□□□ 0.5
SNIP1-202ENST00000468040 TMEM39BQ9GZU3 492 aa18.17■□□□□ 0.5
SNIP1-202ENST00000468040 NAPBQ9H115 298 aa18.17■□□□□ 0.5
SNIP1-202ENST00000468040 MCM9Q9NXL9 1143 aa18.17■□□□□ 0.5
SNIP1-202ENST00000468040 SCAF8Q9UPN6 1271 aaKnown RBP18.17■□□□□ 0.5
SNIP1-202ENST00000468040 DDX60LQ5H9U9 1706 aaKnown RBP18.17■□□□□ 0.5
SNIP1-202ENST00000468040 ZMYM6O95789 1325 aa18.17■□□□□ 0.5
SNIP1-202ENST00000468040 FOXP2O15409 715 aa18.16■□□□□ 0.5
SNIP1-202ENST00000468040 REC8O95072 547 aa18.16■□□□□ 0.5
SNIP1-202ENST00000468040 HLA-DOAP06340 250 aa18.16■□□□□ 0.5
SNIP1-202ENST00000468040 ALX1Q15699 326 aa18.16■□□□□ 0.5
SNIP1-202ENST00000468040 TTC6Q86TZ1 520 aa18.16■□□□□ 0.5
SNIP1-202ENST00000468040 ZFPM1Q8IX07 1006 aa18.16■□□□□ 0.5
SNIP1-202ENST00000468040 HOOK2Q96ED9 719 aa18.16■□□□□ 0.5
SNIP1-202ENST00000468040 GLIS2Q9BZE0 524 aaPredicted RBP18.16■□□□□ 0.5
SNIP1-202ENST00000468040 EPB41L4AQ9HCS5 686 aaPredicted RBP18.16■□□□□ 0.5
SNIP1-202ENST00000468040 ANO2Q9NQ90 1003 aa18.16■□□□□ 0.5
SNIP1-202ENST00000468040 SAP30BPQ9UHR5 308 aaKnown RBP18.16■□□□□ 0.5
SNIP1-202ENST00000468040 POLR2AP24928 1970 aaKnown RBP18.15■□□□□ 0.5
SNIP1-202ENST00000468040 POLR3DP05423 398 aaPredicted RBP18.15■□□□□ 0.5
SNIP1-202ENST00000468040 SUPT20HL1Q3ZLR7 823 aa18.15■□□□□ 0.5
SNIP1-202ENST00000468040 SBK1Q52WX2 424 aa18.15■□□□□ 0.5
SNIP1-202ENST00000468040 TEPSINQ96N21 525 aa18.15■□□□□ 0.5
SNIP1-202ENST00000468040 CSRNP1Q96S65 589 aa18.15■□□□□ 0.5
SNIP1-202ENST00000468040 PI4KBQ9UBF8 816 aa18.15■□□□□ 0.5
SNIP1-202ENST00000468040 CTNNA3Q9UI47 895 aa18.15■□□□□ 0.5
SNIP1-202ENST00000468040 PALD1Q9ULE6 856 aa18.15■□□□□ 0.5
SNIP1-202ENST00000468040 MYH1P12882 1939 aa18.14■□□□□ 0.49
SNIP1-202ENST00000468040 DDTLA6NHG4 134 aaPredicted RBP18.14■□□□□ 0.49
SNIP1-202ENST00000468040 USP17L12C9JPN9 530 aa18.14■□□□□ 0.49
SNIP1-202ENST00000468040 USP17L21D6R901 530 aa18.14■□□□□ 0.49
SNIP1-202ENST00000468040 CTR9Q6PD62 1173 aa18.14■□□□□ 0.49
SNIP1-202ENST00000468040 SH3BP5LQ7L8J4 393 aa18.14■□□□□ 0.49
SNIP1-202ENST00000468040 CDCA5Q96FF9 252 aa18.14■□□□□ 0.49
SNIP1-202ENST00000468040 TAOK2Q9UL54 1235 aa18.14■□□□□ 0.49
SNIP1-202ENST00000468040 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
SNIP1-202ENST00000468040 FGAP02671 866 aa18.13■□□□□ 0.49
SNIP1-202ENST00000468040 NF2P35240 595 aa18.13■□□□□ 0.49
SNIP1-202ENST00000468040 PTH1RQ03431 593 aa18.13■□□□□ 0.49
SNIP1-202ENST00000468040 C8orf34Q49A92 452 aa18.13■□□□□ 0.49
SNIP1-202ENST00000468040 MAP4K1Q92918 833 aa18.13■□□□□ 0.49
SNIP1-202ENST00000468040 LSG1Q9H089 658 aaKnown RBP18.13■□□□□ 0.49
SNIP1-202ENST00000468040 EHD4Q9H223 541 aa18.13■□□□□ 0.49
SNIP1-202ENST00000468040 BAZ2AQ9UIF9 1905 aaKnown RBP18.13■□□□□ 0.49
SNIP1-202ENST00000468040 EPB41L2O43491 1005 aaKnown RBP18.12■□□□□ 0.49
SNIP1-202ENST00000468040 ITGBL1O95965 494 aaPredicted RBP18.12■□□□□ 0.49
SNIP1-202ENST00000468040 FSTL1Q12841 308 aa18.12■□□□□ 0.49
SNIP1-202ENST00000468040 NBPF12Q5TAG4 269 aaPredicted RBP18.12■□□□□ 0.49
SNIP1-202ENST00000468040 C12orf60Q5U649 245 aa18.12■□□□□ 0.49
SNIP1-202ENST00000468040 FOXP4Q8IVH2 680 aaPredicted RBP18.12■□□□□ 0.49
SNIP1-202ENST00000468040 SERPINB13Q9UIV8 391 aa18.12■□□□□ 0.49
SNIP1-202ENST00000468040 LAMB1P07942 1786 aa18.12■□□□□ 0.49
SNIP1-202ENST00000468040 MINDY4BA8MYZ0 360 aa18.11■□□□□ 0.49
SNIP1-202ENST00000468040 TRAF5O00463 557 aa18.11■□□□□ 0.49
SNIP1-202ENST00000468040 SLC3A2P08195 630 aaKnown RBP18.11■□□□□ 0.49
SNIP1-202ENST00000468040 PLCD1P51178 756 aa18.11■□□□□ 0.49
SNIP1-202ENST00000468040 SLC4A8Q2Y0W8 1093 aa18.11■□□□□ 0.49
SNIP1-202ENST00000468040 PRAMEF18Q5VWM3 479 aa18.11■□□□□ 0.49
SNIP1-202ENST00000468040 DCAF15Q66K64 600 aa18.11■□□□□ 0.49
SNIP1-202ENST00000468040 CDAN1Q8IWY9 1227 aa18.11■□□□□ 0.49
SNIP1-202ENST00000468040 CRACR2BQ8N4Y2 399 aaPredicted RBP18.11■□□□□ 0.49
SNIP1-202ENST00000468040 TRIM34Q9BYJ4 488 aa18.11■□□□□ 0.49
SNIP1-202ENST00000468040 HERC5Q9UII4 1024 aaKnown RBP18.11■□□□□ 0.49
SNIP1-202ENST00000468040 ROBO3Q96MS0 1386 aa18.1■□□□□ 0.49
SNIP1-202ENST00000468040 ZNF213O14771 459 aa18.1■□□□□ 0.49
SNIP1-202ENST00000468040 TBC1D12O60347 775 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms