RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 NUDT8Q8WV74 236 aa7.15□□□□□ -1.26
U2AF1-207ENST00000468039 FRRS1LQ9P0K9 344 aa7.15□□□□□ -1.26
U2AF1-207ENST00000468039 J3QW42 95 aa7.14□□□□□ -1.27
U2AF1-207ENST00000468039 ALBP02768 609 aa7.14□□□□□ -1.27
U2AF1-207ENST00000468039 C1orf127Q8N9H9 656 aa7.14□□□□□ -1.27
U2AF1-207ENST00000468039 FAM129BQ96TA1 746 aa7.14□□□□□ -1.27
U2AF1-207ENST00000468039 GZF1Q9H116 711 aaPredicted RBP7.14□□□□□ -1.27
U2AF1-207ENST00000468039 C14orf93Q9H972 538 aaKnown RBP7.14□□□□□ -1.27
U2AF1-207ENST00000468039 CNTN3Q9P232 1028 aa7.14□□□□□ -1.27
U2AF1-207ENST00000468039 PLEKHH1Q9ULM0 1364 aa7.14□□□□□ -1.27
U2AF1-207ENST00000468039 PTCH1Q13635 1447 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 YTHDC2Q9H6S0 1430 aaKnown RBP7.13□□□□□ -1.27
U2AF1-207ENST00000468039 LRPPRCP42704 1394 aaKnown RBP7.13□□□□□ -1.27
U2AF1-207ENST00000468039 MSH6P52701 1360 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 SPDYE3A6NKU9 549 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 FAM177BA6PVY3 158 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 TOM1O60784 492 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 SPATA31C1P0DKV0 1188 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 DGKGP49619 791 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 PERM1Q5SV97 790 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 KRTAP5-3Q6L8H2 238 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 WAPLQ7Z5K2 1190 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 SMG9Q9H0W8 520 aaKnown RBP7.13□□□□□ -1.27
U2AF1-207ENST00000468039 KANSL3Q9P2N6 904 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 FOXD3Q9UJU5 478 aaPredicted RBP7.13□□□□□ -1.27
U2AF1-207ENST00000468039 STARD13Q9Y3M8 1113 aa7.13□□□□□ -1.27
U2AF1-207ENST00000468039 ADGRB1O14514 1584 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 PRAG1Q86YV5 1406 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 SMNDC1O75940 238 aaKnown RBP eCLIP7.12□□□□□ -1.27
U2AF1-207ENST00000468039 KIF4AO95239 1232 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 CYP2E1P05181 493 aaPredicted RBP7.12□□□□□ -1.27
U2AF1-207ENST00000468039 EDN3P14138 238 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 SAFB2Q14151 953 aaKnown RBP eCLIP7.12□□□□□ -1.27
U2AF1-207ENST00000468039 PLD4Q96BZ4 506 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 LPIN3Q9BQK8 851 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 NIF3L1Q9GZT8 377 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 ZFYVE28Q9HCC9 887 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 PRDM6Q9NQX0 595 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 NAGPAQ9UK23 515 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 NALCNQ8IZF0 1738 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 LAMC1P11047 1609 aa7.12□□□□□ -1.27
U2AF1-207ENST00000468039 TECPR2O15040 1411 aa7.11□□□□□ -1.27
U2AF1-207ENST00000468039 ADGRL3Q9HAR2 1447 aa7.11□□□□□ -1.27
U2AF1-207ENST00000468039 TONSLQ96HA7 1378 aa7.11□□□□□ -1.27
U2AF1-207ENST00000468039 CPNE3O75131 537 aaKnown RBP7.11□□□□□ -1.27
U2AF1-207ENST00000468039 HSPA1LP34931 641 aa7.11□□□□□ -1.27
U2AF1-207ENST00000468039 C20orf204Q6ZNR8 217 aa7.11□□□□□ -1.27
U2AF1-207ENST00000468039 TMC7Q7Z402 723 aa7.11□□□□□ -1.27
U2AF1-207ENST00000468039 TTC9Q92623 222 aa7.11□□□□□ -1.27
U2AF1-207ENST00000468039 TRAK1Q9UPV9 953 aa7.11□□□□□ -1.27
U2AF1-207ENST00000468039 KNDC1Q76NI1 1749 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.1□□□□□ -1.27
U2AF1-207ENST00000468039 ABCC11Q96J66 1382 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 EREGO14944 169 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 ATF3P18847 181 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 PLCB3Q01970 1234 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 NBPF8Q3BBV2 869 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 COL13A1Q5TAT6 717 aaPredicted RBP7.1□□□□□ -1.27
U2AF1-207ENST00000468039 CEP135Q66GS9 1140 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 C8orf86Q6ZUL3 223 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 CACTIN-AS1Q8N1I8 211 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 ALKBH8Q96BT7 664 aaKnown RBP7.1□□□□□ -1.27
U2AF1-207ENST00000468039 PRAM1Q96QH2 718 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 DNAJC25Q9H1X3 360 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 CHRDQ9H2X0 955 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 C19orf44Q9H6X5 657 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 SALL4Q9UJQ4 1053 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 NCOA3Q9Y6Q9 1424 aa7.1□□□□□ -1.27
U2AF1-207ENST00000468039 GPR182O15218 404 aa7.09□□□□□ -1.27
U2AF1-207ENST00000468039 ELNP15502 786 aa7.09□□□□□ -1.27
U2AF1-207ENST00000468039 TRAPPC3LQ5T215 181 aa7.09□□□□□ -1.27
U2AF1-207ENST00000468039 TMCO4Q5TGY1 634 aa7.09□□□□□ -1.27
U2AF1-207ENST00000468039 GDF6Q6KF10 455 aaPredicted RBP7.09□□□□□ -1.27
U2AF1-207ENST00000468039 WFDC8Q8IUA0 241 aa7.09□□□□□ -1.27
U2AF1-207ENST00000468039 ASB16Q96NS5 453 aa7.09□□□□□ -1.27
U2AF1-207ENST00000468039 PBX4Q9BYU1 374 aa7.09□□□□□ -1.27
U2AF1-207ENST00000468039 ROBO1Q9Y6N7 1651 aa7.09□□□□□ -1.27
U2AF1-207ENST00000468039 MST1RQ04912 1400 aa7.09□□□□□ -1.28
U2AF1-207ENST00000468039 AFF1P51825 1210 aaKnown RBP7.08□□□□□ -1.28
U2AF1-207ENST00000468039 ORC1Q13415 861 aa7.08□□□□□ -1.28
U2AF1-207ENST00000468039 CCDC27Q2M243 656 aa7.08□□□□□ -1.28
U2AF1-207ENST00000468039 PRRT3Q5FWE3 981 aa7.08□□□□□ -1.28
U2AF1-207ENST00000468039 CEP120Q8N960 986 aa7.08□□□□□ -1.28
U2AF1-207ENST00000468039 HIRIP3Q9BW71 556 aaPredicted RBP7.08□□□□□ -1.28
U2AF1-207ENST00000468039 PLVAPQ9BX97 442 aa7.08□□□□□ -1.28
U2AF1-207ENST00000468039 RASSF4Q9H2L5 321 aa7.08□□□□□ -1.28
U2AF1-207ENST00000468039 POGKQ9P215 609 aa7.08□□□□□ -1.28
U2AF1-207ENST00000468039 FAM135BQ49AJ0 1406 aa7.08□□□□□ -1.28
U2AF1-207ENST00000468039 DLC1Q96QB1 1528 aa7.07□□□□□ -1.28
U2AF1-207ENST00000468039 EIF1AYO14602 144 aaKnown RBP7.07□□□□□ -1.28
U2AF1-207ENST00000468039 POLR3DP05423 398 aaPredicted RBP7.07□□□□□ -1.28
U2AF1-207ENST00000468039 H2AFB1P0C5Y9 115 aa7.07□□□□□ -1.28
U2AF1-207ENST00000468039 H2AFB2P0C5Z0 115 aa7.07□□□□□ -1.28
U2AF1-207ENST00000468039 MFAP1P55081 439 aaKnown RBP7.07□□□□□ -1.28
U2AF1-207ENST00000468039 ATP11AP98196 1134 aa7.07□□□□□ -1.28
U2AF1-207ENST00000468039 MSL1Q68DK7 614 aa7.07□□□□□ -1.28
U2AF1-207ENST00000468039 CSRNP1Q96S65 589 aa7.07□□□□□ -1.28
U2AF1-207ENST00000468039 OSMRQ99650 979 aa7.07□□□□□ -1.28
U2AF1-207ENST00000468039 TRPM1Q7Z4N2 1603 aa7.07□□□□□ -1.28
U2AF1-207ENST00000468039 DCCP43146 1447 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms