RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 TGFBRAP1Q8WUH2 860 aa16.46■□□□□ 0.23
SSBP1-206ENST00000467681 CCDC102AQ96A19 550 aa16.46■□□□□ 0.23
SSBP1-206ENST00000467681 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
SSBP1-206ENST00000467681 FZD1Q9UP38 647 aa16.46■□□□□ 0.23
SSBP1-206ENST00000467681 MYO5AQ9Y4I1 1855 aaKnown RBP16.46■□□□□ 0.22
SSBP1-206ENST00000467681 WDR33Q9C0J8 1336 aaKnown RBP16.45■□□□□ 0.22
SSBP1-206ENST00000467681 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
SSBP1-206ENST00000467681 DDTLA6NHG4 134 aaPredicted RBP16.45■□□□□ 0.22
SSBP1-206ENST00000467681 CHGBP05060 677 aa16.45■□□□□ 0.22
SSBP1-206ENST00000467681 ZNF157P51786 506 aaPredicted RBP16.45■□□□□ 0.22
SSBP1-206ENST00000467681 MAP3K9P80192 1104 aa16.45■□□□□ 0.22
SSBP1-206ENST00000467681 MAP3K10Q02779 954 aa16.45■□□□□ 0.22
SSBP1-206ENST00000467681 LRRFIP1Q32MZ4 808 aaKnown RBP16.45■□□□□ 0.22
SSBP1-206ENST00000467681 DCAF15Q66K64 600 aa16.45■□□□□ 0.22
SSBP1-206ENST00000467681 CYP4F22Q6NT55 531 aa16.45■□□□□ 0.22
SSBP1-206ENST00000467681 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
SSBP1-206ENST00000467681 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
SSBP1-206ENST00000467681 ZSCAN29Q8IWY8 852 aaPredicted RBP16.45■□□□□ 0.22
SSBP1-206ENST00000467681 EVI5LQ96CN4 794 aa16.45■□□□□ 0.22
SSBP1-206ENST00000467681 RFX7Q2KHR2 1363 aa16.45■□□□□ 0.22
SSBP1-206ENST00000467681 RPAP1Q9BWH6 1393 aaPredicted RBP16.45■□□□□ 0.22
SSBP1-206ENST00000467681 ZFYP08048 801 aaPredicted RBP16.44■□□□□ 0.22
SSBP1-206ENST00000467681 PDE4AP27815 886 aa16.44■□□□□ 0.22
SSBP1-206ENST00000467681 MAPKAPK5Q8IW41 473 aa16.44■□□□□ 0.22
SSBP1-206ENST00000467681 JMYQ8N9B5 988 aa16.44■□□□□ 0.22
SSBP1-206ENST00000467681 SLC10A4Q96EP9 437 aa16.44■□□□□ 0.22
SSBP1-206ENST00000467681 OSBPL5Q9H0X9 879 aaPredicted RBP16.44■□□□□ 0.22
SSBP1-206ENST00000467681 SSC5DA1L4H1 1573 aa16.43■□□□□ 0.22
SSBP1-206ENST00000467681 FAM155AB1AL88 458 aaPredicted RBP16.43■□□□□ 0.22
SSBP1-206ENST00000467681 TBC1D12O60347 775 aa16.43■□□□□ 0.22
SSBP1-206ENST00000467681 TICAM2Q86XR7 235 aa16.43■□□□□ 0.22
SSBP1-206ENST00000467681 CSRNP1Q96S65 589 aa16.43■□□□□ 0.22
SSBP1-206ENST00000467681 ZNF341Q9BYN7 854 aa16.43■□□□□ 0.22
SSBP1-206ENST00000467681 DHX36Q9H2U1 1008 aaKnown RBP16.43■□□□□ 0.22
SSBP1-206ENST00000467681 ZNF112Q9UJU3 913 aa16.43■□□□□ 0.22
SSBP1-206ENST00000467681 MAP2K2P36507 400 aa16.42■□□□□ 0.22
SSBP1-206ENST00000467681 ERICH6BQ5W0A0 696 aa16.42■□□□□ 0.22
SSBP1-206ENST00000467681 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-206ENST00000467681 CENPQQ7L2Z9 268 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-206ENST00000467681 FOXP4Q8IVH2 680 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-206ENST00000467681 ANKRD13AQ8IZ07 590 aa16.42■□□□□ 0.22
SSBP1-206ENST00000467681 LCORLQ8N3X6 602 aa16.42■□□□□ 0.22
SSBP1-206ENST00000467681 APPBP2Q92624 585 aa16.42■□□□□ 0.22
SSBP1-206ENST00000467681 CLMNQ96JQ2 1002 aa16.42■□□□□ 0.22
SSBP1-206ENST00000467681 FSD1Q9BTV5 496 aa16.42■□□□□ 0.22
SSBP1-206ENST00000467681 CRNKL1Q9BZJ0 848 aaKnown RBP16.42■□□□□ 0.22
SSBP1-206ENST00000467681 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
SSBP1-206ENST00000467681 ARMT1Q9H993 441 aa16.42■□□□□ 0.22
SSBP1-206ENST00000467681 PI4KBQ9UBF8 816 aa16.42■□□□□ 0.22
SSBP1-206ENST00000467681 ATRNL1Q5VV63 1379 aa16.41■□□□□ 0.22
SSBP1-206ENST00000467681 MBD4O95243 580 aa16.41■□□□□ 0.22
SSBP1-206ENST00000467681 SLC10A3P09131 477 aa16.41■□□□□ 0.22
SSBP1-206ENST00000467681 USP5P45974 858 aa16.41■□□□□ 0.22
SSBP1-206ENST00000467681 NOGQ13253 232 aa16.41■□□□□ 0.22
SSBP1-206ENST00000467681 GRM1Q13255 1194 aa16.41■□□□□ 0.22
SSBP1-206ENST00000467681 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.41■□□□□ 0.227e-9■□□□□ 9.4
SSBP1-206ENST00000467681 OSBP2Q969R2 916 aa16.41■□□□□ 0.22
SSBP1-206ENST00000467681 STRBPQ96SI9 672 aaKnown RBP16.41■□□□□ 0.22
SSBP1-206ENST00000467681 PALD1Q9ULE6 856 aa16.41■□□□□ 0.22
SSBP1-206ENST00000467681 FLT1P17948 1338 aa16.41■□□□□ 0.22
SSBP1-206ENST00000467681 PAPPA2Q9BXP8 1791 aa16.41■□□□□ 0.22
SSBP1-206ENST00000467681 PHF20L1A8MW92 1017 aa16.4■□□□□ 0.22
SSBP1-206ENST00000467681 AOC2O75106 756 aa16.4■□□□□ 0.22
SSBP1-206ENST00000467681 RASAL3Q86YV0 1011 aa16.4■□□□□ 0.22
SSBP1-206ENST00000467681 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
SSBP1-206ENST00000467681 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
SSBP1-206ENST00000467681 ZIC5Q96T25 663 aa16.4■□□□□ 0.22
SSBP1-206ENST00000467681 AK9Q5TCS8 1911 aa16.39■□□□□ 0.21
SSBP1-206ENST00000467681 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
SSBP1-206ENST00000467681 PRKAB2O43741 272 aa16.39■□□□□ 0.21
SSBP1-206ENST00000467681 ZMYM1Q5SVZ6 1142 aa16.39■□□□□ 0.21
SSBP1-206ENST00000467681 SPRYD7Q5W111 196 aa16.39■□□□□ 0.21
SSBP1-206ENST00000467681 METTL16Q86W50 562 aaKnown RBP16.39■□□□□ 0.21
SSBP1-206ENST00000467681 WRNIP1Q96S55 665 aa16.39■□□□□ 0.21
SSBP1-206ENST00000467681 SAP30BPQ9UHR5 308 aaKnown RBP16.39■□□□□ 0.21
SSBP1-206ENST00000467681 CSADQ9Y600 493 aa16.39■□□□□ 0.21
SSBP1-206ENST00000467681 DOCK2Q92608 1830 aa16.39■□□□□ 0.21
SSBP1-206ENST00000467681 COL2A1P02458 1487 aaPredicted RBP16.38■□□□□ 0.21
SSBP1-206ENST00000467681 SLURP2P0DP57 97 aa16.38■□□□□ 0.21
SSBP1-206ENST00000467681 INPP5BP32019 993 aa16.38■□□□□ 0.21
SSBP1-206ENST00000467681 KIF23Q02241 960 aaPredicted RBP16.38■□□□□ 0.21
SSBP1-206ENST00000467681 VGLL4Q14135 290 aa16.38■□□□□ 0.21
SSBP1-206ENST00000467681 TTC6Q86TZ1 520 aa16.38■□□□□ 0.21
SSBP1-206ENST00000467681 ZKSCAN4Q969J2 545 aaPredicted RBP16.38■□□□□ 0.21
SSBP1-206ENST00000467681 RILPL2Q969X0 211 aa16.38■□□□□ 0.21
SSBP1-206ENST00000467681 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.38■□□□□ 0.21
SSBP1-206ENST00000467681 DCP1AQ9NPI6 582 aaPredicted RBP16.38■□□□□ 0.21
SSBP1-206ENST00000467681 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
SSBP1-206ENST00000467681 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
SSBP1-206ENST00000467681 WNK4Q96J92 1243 aa16.37■□□□□ 0.21
SSBP1-206ENST00000467681 ELP3Q9H9T3 547 aa16.37■□□□□ 0.21
SSBP1-206ENST00000467681 MCM9Q9NXL9 1143 aa16.37■□□□□ 0.21
SSBP1-206ENST00000467681 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.37■□□□□ 0.21
SSBP1-206ENST00000467681 HERC5Q9UII4 1024 aaKnown RBP16.37■□□□□ 0.21
SSBP1-206ENST00000467681 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
SSBP1-206ENST00000467681 M0R2C6 588 aa16.36■□□□□ 0.21
SSBP1-206ENST00000467681 GPAA1O43292 621 aa16.36■□□□□ 0.21
SSBP1-206ENST00000467681 CTNND1O60716 968 aaKnown RBP16.36■□□□□ 0.21
SSBP1-206ENST00000467681 POLR3DP05423 398 aaPredicted RBP16.36■□□□□ 0.21
SSBP1-206ENST00000467681 HLA-DOAP06340 250 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms