RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 GTF2A2P52657 109 aa22.2■■□□□ 1.14
CGREF1-208ENST00000467539 SH3BP5LQ7L8J4 393 aa22.2■■□□□ 1.14
CGREF1-208ENST00000467539 CLASRPQ8N2M8 674 aaKnown RBP22.2■■□□□ 1.14
CGREF1-208ENST00000467539 PTPN18Q99952 460 aa22.2■■□□□ 1.14
CGREF1-208ENST00000467539 MCOLN1Q9GZU1 580 aa22.2■■□□□ 1.14
CGREF1-208ENST00000467539 IL1RAPL2Q9NP60 686 aa22.2■■□□□ 1.14
CGREF1-208ENST00000467539 DDX4Q9NQI0 724 aaKnown RBP22.2■■□□□ 1.14
CGREF1-208ENST00000467539 PPP4CP60510 307 aa22.19■■□□□ 1.14
CGREF1-208ENST00000467539 DGKZQ13574 1117 aa22.19■■□□□ 1.14
CGREF1-208ENST00000467539 NAA16Q6N069 864 aaPredicted RBP22.19■■□□□ 1.14
CGREF1-208ENST00000467539 R3HDMLQ9H3Y0 253 aa22.19■■□□□ 1.14
CGREF1-208ENST00000467539 RFX7Q2KHR2 1363 aa22.18■■□□□ 1.14
CGREF1-208ENST00000467539 DDTLA6NHG4 134 aaPredicted RBP22.18■■□□□ 1.14
CGREF1-208ENST00000467539 BAG3O95817 575 aa22.18■■□□□ 1.14
CGREF1-208ENST00000467539 INPP5BP32019 993 aa22.18■■□□□ 1.14
CGREF1-208ENST00000467539 ZSCAN29Q8IWY8 852 aaPredicted RBP22.18■■□□□ 1.14
CGREF1-208ENST00000467539 ZNF296Q8WUU4 475 aaPredicted RBP22.18■■□□□ 1.14
CGREF1-208ENST00000467539 OTUD5Q96G74 571 aa22.18■■□□□ 1.14
CGREF1-208ENST00000467539 PIH1D3Q9NQM4 214 aaKnown RBP22.18■■□□□ 1.14
CGREF1-208ENST00000467539 PHF20L1A8MW92 1017 aa22.17■■□□□ 1.14
CGREF1-208ENST00000467539 PPATQ06203 517 aa22.17■■□□□ 1.14
CGREF1-208ENST00000467539 PICALMQ13492 652 aa22.17■■□□□ 1.14
CGREF1-208ENST00000467539 NOL10Q9BSC4 688 aaKnown RBP22.17■■□□□ 1.14
CGREF1-208ENST00000467539 APBB1O00213 710 aa22.16■■□□□ 1.14
CGREF1-208ENST00000467539 PPIL2Q13356 520 aa22.16■■□□□ 1.14
CGREF1-208ENST00000467539 NOL9Q5SY16 702 aaKnown RBP22.16■■□□□ 1.14
CGREF1-208ENST00000467539 BRI3BPQ8WY22 251 aa22.16■■□□□ 1.14
CGREF1-208ENST00000467539 ATRNL1Q5VV63 1379 aa22.15■■□□□ 1.14
CGREF1-208ENST00000467539 CCL15-CCL14A0A0B4J2E2 113 aa22.15■■□□□ 1.14
CGREF1-208ENST00000467539 IRF6O14896 467 aa22.15■■□□□ 1.14
CGREF1-208ENST00000467539 TBC1D12O60347 775 aa22.15■■□□□ 1.14
CGREF1-208ENST00000467539 FKTNO75072 461 aa22.15■■□□□ 1.14
CGREF1-208ENST00000467539 PLCG2P16885 1265 aa22.15■■□□□ 1.14
CGREF1-208ENST00000467539 CCL15Q16663 113 aa22.15■■□□□ 1.14
CGREF1-208ENST00000467539 TMED8Q6PL24 325 aaPredicted RBP22.15■■□□□ 1.14
CGREF1-208ENST00000467539 CTU1Q7Z7A3 348 aaKnown RBP22.15■■□□□ 1.14
CGREF1-208ENST00000467539 TEX11Q8IYF3 940 aa22.15■■□□□ 1.14
CGREF1-208ENST00000467539 IFIT2P09913 472 aaKnown RBP22.14■■□□□ 1.13
CGREF1-208ENST00000467539 CETPP11597 493 aa22.14■■□□□ 1.13
CGREF1-208ENST00000467539 SNAPC2Q13487 334 aa22.14■■□□□ 1.13
CGREF1-208ENST00000467539 SH3RF3Q8TEJ3 882 aaPredicted RBP22.14■■□□□ 1.13
CGREF1-208ENST00000467539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.14■■□□□ 1.13
CGREF1-208ENST00000467539 AATFQ9NY61 560 aaKnown RBP eCLIP22.14■■□□□ 1.13
CGREF1-208ENST00000467539 AK9Q5TCS8 1911 aa22.14■■□□□ 1.13
CGREF1-208ENST00000467539 OTOFQ9HC10 1997 aa22.13■■□□□ 1.13
CGREF1-208ENST00000467539 ADGRA1Q86SQ6 560 aa22.13■■□□□ 1.13
CGREF1-208ENST00000467539 ANTXR1Q9H6X2 564 aa22.13■■□□□ 1.13
CGREF1-208ENST00000467539 IDH1O75874 414 aaKnown RBP22.12■■□□□ 1.13
CGREF1-208ENST00000467539 CYP7A1P22680 504 aa22.12■■□□□ 1.13
CGREF1-208ENST00000467539 MAP3K12Q12852 859 aa22.12■■□□□ 1.13
CGREF1-208ENST00000467539 PKN2Q16513 984 aaKnown RBP22.12■■□□□ 1.13
CGREF1-208ENST00000467539 OSBPL5Q9H0X9 879 aaPredicted RBP22.12■■□□□ 1.13
CGREF1-208ENST00000467539 NDUFB9Q9Y6M9 179 aa22.12■■□□□ 1.13
CGREF1-208ENST00000467539 CTNND1O60716 968 aaKnown RBP22.11■■□□□ 1.13
CGREF1-208ENST00000467539 CRHR2Q13324 411 aa22.11■■□□□ 1.13
CGREF1-208ENST00000467539 TTF1Q15361 905 aaPredicted RBP22.11■■□□□ 1.13
CGREF1-208ENST00000467539 ZCCHC17Q9NP64 241 aaKnown RBP22.11■■□□□ 1.13
CGREF1-208ENST00000467539 KCNH4Q9UQ05 1017 aa22.11■■□□□ 1.13
CGREF1-208ENST00000467539 LAMB1P07942 1786 aa22.1■■□□□ 1.13
CGREF1-208ENST00000467539 CXCL11O14625 94 aa22.1■■□□□ 1.13
CGREF1-208ENST00000467539 CERS3Q8IU89 383 aa22.1■■□□□ 1.13
CGREF1-208ENST00000467539 SCYL3Q8IZE3 742 aa22.1■■□□□ 1.13
CGREF1-208ENST00000467539 FAM43AQ8N2R8 423 aa22.1■■□□□ 1.13
CGREF1-208ENST00000467539 TGFBRAP1Q8WUH2 860 aa22.1■■□□□ 1.13
CGREF1-208ENST00000467539 LRRCC1Q9C099 1032 aa22.1■■□□□ 1.13
CGREF1-208ENST00000467539 DHX36Q9H2U1 1008 aaKnown RBP22.1■■□□□ 1.13
CGREF1-208ENST00000467539 DCTPP1Q9H773 170 aa22.1■■□□□ 1.13
CGREF1-208ENST00000467539 ZFYVE28Q9HCC9 887 aa22.1■■□□□ 1.13
CGREF1-208ENST00000467539 SLURP2P0DP57 97 aa22.09■■□□□ 1.13
CGREF1-208ENST00000467539 RRP1P56182 461 aaKnown RBP22.09■■□□□ 1.13
CGREF1-208ENST00000467539 MAGEB6Q8N7X4 407 aa22.09■■□□□ 1.13
CGREF1-208ENST00000467539 YTHDC1Q96MU7 727 aaKnown RBP22.09■■□□□ 1.13
CGREF1-208ENST00000467539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.09■■□□□ 1.13
CGREF1-208ENST00000467539 PICK1Q9NRD5 415 aa22.09■■□□□ 1.13
CGREF1-208ENST00000467539 PI4KBQ9UBF8 816 aa22.09■■□□□ 1.13
CGREF1-208ENST00000467539 COL2A1P02458 1487 aaPredicted RBP22.09■■□□□ 1.13
CGREF1-208ENST00000467539 CCDC85CA6NKD9 419 aa22.08■■□□□ 1.13
CGREF1-208ENST00000467539 BTBD19C9JJ37 291 aa22.08■■□□□ 1.13
CGREF1-208ENST00000467539 PTPRAP18433 802 aa22.08■■□□□ 1.13
CGREF1-208ENST00000467539 ATP5JP18859 108 aa22.08■■□□□ 1.13
CGREF1-208ENST00000467539 DYNLL1P63167 89 aaKnown RBP22.08■■□□□ 1.13
CGREF1-208ENST00000467539 FOXP4Q8IVH2 680 aaPredicted RBP22.08■■□□□ 1.13
CGREF1-208ENST00000467539 ZHX2Q9Y6X8 837 aa22.08■■□□□ 1.13
CGREF1-208ENST00000467539 TAF1CQ15572 869 aaPredicted RBP22.07■■□□□ 1.12
CGREF1-208ENST00000467539 BCL11AQ9H165 835 aa22.07■■□□□ 1.12
CGREF1-208ENST00000467539 HERC5Q9UII4 1024 aaKnown RBP22.07■■□□□ 1.12
CGREF1-208ENST00000467539 SP3Q02447 781 aa22.06■■□□□ 1.12
CGREF1-208ENST00000467539 ANKRD23Q86SG2 305 aa22.06■■□□□ 1.12
CGREF1-208ENST00000467539 METTL16Q86W50 562 aaKnown RBP22.06■■□□□ 1.12
CGREF1-208ENST00000467539 MAPKAPK5Q8IW41 473 aa22.06■■□□□ 1.12
CGREF1-208ENST00000467539 AFG3L2Q9Y4W6 797 aa22.06■■□□□ 1.12
CGREF1-208ENST00000467539 MOGSQ13724 837 aa22.05■■□□□ 1.12
CGREF1-208ENST00000467539 SLC9C2Q5TAH2 1124 aa22.05■■□□□ 1.12
CGREF1-208ENST00000467539 ERO1AQ96HE7 468 aa22.05■■□□□ 1.12
CGREF1-208ENST00000467539 PCDHB15Q9Y5E8 787 aa22.05■■□□□ 1.12
CGREF1-208ENST00000467539 FLT1P17948 1338 aa22.05■■□□□ 1.12
CGREF1-208ENST00000467539 GOLIM4O00461 696 aa22.04■■□□□ 1.12
CGREF1-208ENST00000467539 SMARCA5O60264 1052 aaPredicted RBP22.04■■□□□ 1.12
CGREF1-208ENST00000467539 TLR2O60603 784 aa22.04■■□□□ 1.12
CGREF1-208ENST00000467539 MIGA1Q8NAN2 632 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms