RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 ANGEL1Q9UNK9 670 aaKnown RBP17.81■□□□□ 0.44
CHD1L-205ENST00000467213 CHMP4BP1P59074 171 aa17.8■□□□□ 0.44
CHD1L-205ENST00000467213 KRT40Q6A162 431 aa17.8■□□□□ 0.44
CHD1L-205ENST00000467213 KRI1Q8N9T8 703 aaKnown RBP17.8■□□□□ 0.44
CHD1L-205ENST00000467213 TMEM87BQ96K49 555 aa17.8■□□□□ 0.44
CHD1L-205ENST00000467213 RAI14Q9P0K7 980 aa17.8■□□□□ 0.44
CHD1L-205ENST00000467213 UBR2Q8IWV8 1755 aa17.8■□□□□ 0.44
CHD1L-205ENST00000467213 LRP6O75581 1613 aa17.8■□□□□ 0.44
CHD1L-205ENST00000467213 PHKG2P15735 406 aa17.8■□□□□ 0.44
CHD1L-205ENST00000467213 TTLL5Q6EMB2 1281 aa17.8■□□□□ 0.44
CHD1L-205ENST00000467213 DHX58Q96C10 678 aa17.8■□□□□ 0.44
CHD1L-205ENST00000467213 AKAP2Q9Y2D5 859 aa17.8■□□□□ 0.44
CHD1L-205ENST00000467213 BMP6P22004 513 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 LONRF3Q496Y0 759 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 TOGARAM2Q6ZUX3 1019 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 CHST3Q7LGC8 479 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 SRLQ86TD4 932 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 ZNF496Q96IT1 587 aaPredicted RBP17.79■□□□□ 0.44
CHD1L-205ENST00000467213 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 MKRN1Q9UHC7 482 aaKnown RBP17.79■□□□□ 0.44
CHD1L-205ENST00000467213 SGMS1Q86VZ5 419 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 MAN1B1Q9UKM7 699 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 L1RE1Q9UN81 338 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 ITIH6Q6UXX5 1313 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 A0A1B0GUL7 405 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 AKR1B15C9JRZ8 316 aaPredicted RBP17.79■□□□□ 0.44
CHD1L-205ENST00000467213 ZNF213O14771 459 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 MARCKSP29966 332 aaPredicted RBP17.79■□□□□ 0.44
CHD1L-205ENST00000467213 RASGRP2Q7LDG7 609 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 WASF1Q92558 559 aa17.79■□□□□ 0.44
CHD1L-205ENST00000467213 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHD1L-205ENST00000467213 MYO1CO00159 1063 aa17.78■□□□□ 0.44
CHD1L-205ENST00000467213 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
CHD1L-205ENST00000467213 PBX1P40424 430 aa17.78■□□□□ 0.44
CHD1L-205ENST00000467213 POSTNQ15063 836 aa17.78■□□□□ 0.44
CHD1L-205ENST00000467213 ZNF512BQ96KM6 892 aaPredicted RBP17.78■□□□□ 0.44
CHD1L-205ENST00000467213 ANKZF1Q9H8Y5 726 aa17.78■□□□□ 0.44
CHD1L-205ENST00000467213 ADGRG1Q9Y653 693 aa17.78■□□□□ 0.44
CHD1L-205ENST00000467213 TTC39AQ5SRH9 613 aa17.78■□□□□ 0.44
CHD1L-205ENST00000467213 CCDC191Q8NCU4 936 aa17.78■□□□□ 0.44
CHD1L-205ENST00000467213 CTAGE1Q96RT6 745 aa17.78■□□□□ 0.44
CHD1L-205ENST00000467213 VIPAS39Q9H9C1 493 aa17.78■□□□□ 0.44
CHD1L-205ENST00000467213 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
CHD1L-205ENST00000467213 CWC25Q9NXE8 425 aaPredicted RBP17.78■□□□□ 0.44
CHD1L-205ENST00000467213 IQSEC3Q9UPP2 1182 aaPredicted RBP17.78■□□□□ 0.44
CHD1L-205ENST00000467213 NFE2L3Q9Y4A8 694 aa17.78■□□□□ 0.44
CHD1L-205ENST00000467213 COL22A1Q8NFW1 1626 aaPredicted RBP17.78■□□□□ 0.44
CHD1L-205ENST00000467213 PTPREP23469 700 aa17.77■□□□□ 0.44
CHD1L-205ENST00000467213 PLCD1P51178 756 aa17.77■□□□□ 0.44
CHD1L-205ENST00000467213 TIMM10P62072 90 aa17.77■□□□□ 0.44
CHD1L-205ENST00000467213 PDE4BQ07343 736 aa17.77■□□□□ 0.44
CHD1L-205ENST00000467213 WHAMMP3Q1A5X7 153 aa17.77■□□□□ 0.44
CHD1L-205ENST00000467213 CCDC12Q8WUD4 166 aaPredicted RBP17.77■□□□□ 0.44
CHD1L-205ENST00000467213 DCAF5Q96JK2 942 aa17.77■□□□□ 0.44
CHD1L-205ENST00000467213 MED4Q9NPJ6 270 aa17.77■□□□□ 0.44
CHD1L-205ENST00000467213 TTF2Q9UNY4 1162 aaKnown RBP17.77■□□□□ 0.44
CHD1L-205ENST00000467213 MYO5AQ9Y4I1 1855 aaKnown RBP17.77■□□□□ 0.44
CHD1L-205ENST00000467213 ALS2Q96Q42 1657 aa17.77■□□□□ 0.44
CHD1L-205ENST00000467213 TIAM2Q8IVF5 1701 aa17.77■□□□□ 0.43
CHD1L-205ENST00000467213 KIF5CO60282 957 aa17.77■□□□□ 0.43
CHD1L-205ENST00000467213 METAP2P50579 478 aaKnown RBP eCLIP17.77■□□□□ 0.43
CHD1L-205ENST00000467213 GNL2Q13823 731 aaKnown RBP17.77■□□□□ 0.43
CHD1L-205ENST00000467213 NTRK3Q16288 839 aa17.77■□□□□ 0.43
CHD1L-205ENST00000467213 LEKR1Q6ZMV7 388 aa17.77■□□□□ 0.43
CHD1L-205ENST00000467213 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.43
CHD1L-205ENST00000467213 ACBD3Q9H3P7 528 aa17.77■□□□□ 0.43
CHD1L-205ENST00000467213 ZCCHC17Q9NP64 241 aaKnown RBP17.77■□□□□ 0.43
CHD1L-205ENST00000467213 TBC1D2BQ9UPU7 963 aa17.77■□□□□ 0.43
CHD1L-205ENST00000467213 H3BQF6 201 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 TRDNQ13061 729 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 TRIM29Q14134 588 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 FAM71BQ8TC56 605 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 COL18A1P39060 1754 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 NOM1Q5C9Z4 860 aaKnown RBP17.76■□□□□ 0.43
CHD1L-205ENST00000467213 WDR93Q6P2C0 686 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 TTC5Q8N0Z6 440 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 CCDC34Q96HJ3 373 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 MTA3Q9BTC8 594 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 BCL9LQ86UU0 1499 aa17.76■□□□□ 0.43
CHD1L-205ENST00000467213 AKAP11Q9UKA4 1901 aa17.75■□□□□ 0.43
CHD1L-205ENST00000467213 CDC27P30260 824 aa17.75■□□□□ 0.43
CHD1L-205ENST00000467213 LIFRP42702 1097 aa17.75■□□□□ 0.43
CHD1L-205ENST00000467213 SLC39A6Q13433 755 aa17.75■□□□□ 0.43
CHD1L-205ENST00000467213 APTXQ7Z2E3 356 aaKnown RBP17.75■□□□□ 0.43
CHD1L-205ENST00000467213 RCAN1P53805 252 aa17.75■□□□□ 0.43
CHD1L-205ENST00000467213 RILPL1Q5EBL4 403 aa17.75■□□□□ 0.43
CHD1L-205ENST00000467213 APOA5Q6Q788 366 aa17.75■□□□□ 0.43
CHD1L-205ENST00000467213 RAPGEF4Q8WZA2 1011 aa17.75■□□□□ 0.43
CHD1L-205ENST00000467213 TRIM34Q9BYJ4 488 aa17.75■□□□□ 0.43
CHD1L-205ENST00000467213 FOXP1Q9H334 677 aaPredicted RBP17.75■□□□□ 0.43
CHD1L-205ENST00000467213 PAPPAQ13219 1627 aa17.75■□□□□ 0.43
CHD1L-205ENST00000467213 ALX1Q15699 326 aa17.74■□□□□ 0.43
CHD1L-205ENST00000467213 MRPL44Q9H9J2 332 aaKnown RBP17.74■□□□□ 0.43
CHD1L-205ENST00000467213 CEP126Q9P2H0 1117 aa17.74■□□□□ 0.43
CHD1L-205ENST00000467213 CHD4Q14839 1912 aa17.74■□□□□ 0.43
CHD1L-205ENST00000467213 ISM2Q6H9L7 571 aa17.74■□□□□ 0.43
CHD1L-205ENST00000467213 NOSTRINQ8IVI9 506 aa17.74■□□□□ 0.43
CHD1L-205ENST00000467213 GOLGA6L1Q8N7Z2 621 aa17.74■□□□□ 0.43
CHD1L-205ENST00000467213 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.74■□□□□ 0.435e-7■■■□□ 15.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms