RNA–Protein interactions for RNA: ENST00000466901.5

COPS7B-218, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-218ENST00000466901 PPP4CP60510 307 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 MKRN3Q13064 507 aaKnown RBP9.5□□□□□ -0.89
COPS7B-218ENST00000466901 SLC9C2Q5TAH2 1124 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 SPRYD7Q5W111 196 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 CERS3Q8IU89 383 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 SH3RF3Q8TEJ3 882 aaPredicted RBP9.5□□□□□ -0.89
COPS7B-218ENST00000466901 GCC1Q96CN9 775 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 WRNIP1Q96S55 665 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 CSRNP1Q96S65 589 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 HAUS7Q99871 368 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 ZNF341Q9BYN7 854 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 DDX4Q9NQI0 724 aaKnown RBP9.5□□□□□ -0.89
COPS7B-218ENST00000466901 ECHDC1Q9NTX5 307 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 PAG1Q9NWQ8 432 aa9.5□□□□□ -0.89
COPS7B-218ENST00000466901 ZBTB48P10074 688 aaPredicted RBP9.49□□□□□ -0.89
COPS7B-218ENST00000466901 SREBF2Q12772 1141 aa9.49□□□□□ -0.89
COPS7B-218ENST00000466901 VGLL4Q14135 290 aa9.49□□□□□ -0.89
COPS7B-218ENST00000466901 ANKRD45Q5TZF3 282 aa9.49□□□□□ -0.89
COPS7B-218ENST00000466901 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.49□□□□□ -0.89
COPS7B-218ENST00000466901 ADGRA1Q86SQ6 560 aa9.49□□□□□ -0.89
COPS7B-218ENST00000466901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.49□□□□□ -0.89
COPS7B-218ENST00000466901 WNK4Q96J92 1243 aa9.49□□□□□ -0.89
COPS7B-218ENST00000466901 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.49□□□□□ -0.89
COPS7B-218ENST00000466901 ELP3Q9H9T3 547 aa9.49□□□□□ -0.89
COPS7B-218ENST00000466901 RFX7Q2KHR2 1363 aa9.49□□□□□ -0.89
COPS7B-218ENST00000466901 OTOFQ9HC10 1997 aa9.48□□□□□ -0.89
COPS7B-218ENST00000466901 DDTLA6NHG4 134 aaPredicted RBP9.48□□□□□ -0.89
COPS7B-218ENST00000466901 MANSC4A6NHS7 340 aaPredicted RBP9.48□□□□□ -0.89
COPS7B-218ENST00000466901 PDE6AP16499 860 aa9.48□□□□□ -0.89
COPS7B-218ENST00000466901 TM4SF4P48230 202 aa9.48□□□□□ -0.89
COPS7B-218ENST00000466901 INHBEP58166 350 aa9.48□□□□□ -0.89
COPS7B-218ENST00000466901 DYNLL1P63167 89 aaKnown RBP9.48□□□□□ -0.89
COPS7B-218ENST00000466901 SH3BP5LQ7L8J4 393 aa9.48□□□□□ -0.89
COPS7B-218ENST00000466901 MIGA1Q8NAN2 632 aa9.48□□□□□ -0.89
COPS7B-218ENST00000466901 TGFBRAP1Q8WUH2 860 aa9.48□□□□□ -0.89
COPS7B-218ENST00000466901 ZKSCAN4Q969J2 545 aaPredicted RBP9.48□□□□□ -0.89
COPS7B-218ENST00000466901 OPTNQ96CV9 577 aa9.48□□□□□ -0.89
COPS7B-218ENST00000466901 EDC3Q96F86 508 aaKnown RBP9.48□□□□□ -0.89
COPS7B-218ENST00000466901 OSBPL5Q9H0X9 879 aaPredicted RBP9.48□□□□□ -0.89
COPS7B-218ENST00000466901 TTC41PQ6P2S7 1318 aa9.48□□□□□ -0.89
COPS7B-218ENST00000466901 CDK5RAP2Q96SN8 1893 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 MAGEB6P1A0A0J9YX57 407 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 ERC2O15083 957 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 TRPA1O75762 1119 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 HSPA8P11142 646 aaKnown RBP9.47□□□□□ -0.89
COPS7B-218ENST00000466901 INPP5BP32019 993 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 USP5P45974 858 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 LBX1P52954 281 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 IRX6P78412 446 aaPredicted RBP9.47□□□□□ -0.89
COPS7B-218ENST00000466901 TSHZ3Q63HK5 1081 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 ZSCAN25Q6NSZ9 544 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 ERO1BQ86YB8 467 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 MAPKAPK5Q8IW41 473 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 DHX36Q9H2U1 1008 aaKnown RBP9.47□□□□□ -0.89
COPS7B-218ENST00000466901 RNF186Q9NXI6 227 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 SAGE1Q9NXZ1 904 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 ZNF112Q9UJU3 913 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 SNCAIPQ9Y6H5 919 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 FLT1P17948 1338 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 ZNF532Q9HCE3 1301 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 ATRNL1Q5VV63 1379 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 FOCADQ5VW36 1801 aa9.47□□□□□ -0.89
COPS7B-218ENST00000466901 MYH7P12883 1935 aa9.46□□□□□ -0.89
COPS7B-218ENST00000466901 TBC1D12O60347 775 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 GLRX3O76003 335 aaKnown RBP9.46□□□□□ -0.9
COPS7B-218ENST00000466901 MX1P20591 662 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 GJA5P36382 358 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 MAP3K10Q02779 954 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 OTUD7BQ6GQQ9 843 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 OTUD7AQ8TE49 926 aaPredicted RBP9.46□□□□□ -0.9
COPS7B-218ENST00000466901 OTUD5Q96G74 571 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 TRIM34Q9BYJ4 488 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.46□□□□□ -0.9
COPS7B-218ENST00000466901 PRDM10Q9NQV6 1147 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 PICK1Q9NRD5 415 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 PI4KBQ9UBF8 816 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 TSKSQ9UJT2 592 aa9.46□□□□□ -0.9
COPS7B-218ENST00000466901 COL2A1P02458 1487 aaPredicted RBP9.46□□□□□ -0.9
COPS7B-218ENST00000466901 MYH1P12882 1939 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 TCRBV5S4A2TA0A5A2 114 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 PHF20L1A8MW92 1017 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 CTNND1O60716 968 aaKnown RBP9.45□□□□□ -0.9
COPS7B-218ENST00000466901 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 IGHDP01880 384 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 HLA-DOAP06340 250 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 ADD2P35612 726 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 GTF2A2P52657 109 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 PPATQ06203 517 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 UBE3CQ15386 1083 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 LRRFIP1Q32MZ4 808 aaKnown RBP9.45□□□□□ -0.9
COPS7B-218ENST00000466901 NOL9Q5SY16 702 aaKnown RBP9.45□□□□□ -0.9
COPS7B-218ENST00000466901 COL13A1Q5TAT6 717 aaPredicted RBP9.45□□□□□ -0.9
COPS7B-218ENST00000466901 B4GALNT3Q6L9W6 998 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 FOXP4Q8IVH2 680 aaPredicted RBP9.45□□□□□ -0.9
COPS7B-218ENST00000466901 SMC5Q8IY18 1101 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 KBTBD3Q8NAB2 608 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 CNKSR2Q8WXI2 1034 aa9.45□□□□□ -0.9
COPS7B-218ENST00000466901 RIOK1Q9BRS2 568 aaKnown RBP9.45□□□□□ -0.9
COPS7B-218ENST00000466901 CRNKL1Q9BZJ0 848 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms