RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 ZNF76P36508 570 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 ZC3H12AQ5D1E8 599 aaKnown RBP6.98□□□□□ -1.29
EDEM3-205ENST00000466606 LRFN4Q6PJG9 635 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 PRR23CQ6ZRP0 262 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 HS2ST1Q7LGA3 356 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 ERMP1Q7Z2K6 904 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 TMEM74Q96NL1 305 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 RSRP1Q9BUV0 290 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 MIR1-1HGQ9H1L0 117 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 SEMA6BQ9H3T3 888 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 DISC1Q9NRI5 854 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 HMX2A2RU54 273 aa6.97□□□□□ -1.29
EDEM3-205ENST00000466606 DYRK3O43781 588 aa6.97□□□□□ -1.29
EDEM3-205ENST00000466606 RLBP1P12271 317 aa6.97□□□□□ -1.29
EDEM3-205ENST00000466606 HCLS1P14317 486 aaPredicted RBP6.97□□□□□ -1.29
EDEM3-205ENST00000466606 FANCCQ00597 558 aa6.97□□□□□ -1.29
EDEM3-205ENST00000466606 CAMK2GQ13555 558 aaPredicted RBP6.97□□□□□ -1.29
EDEM3-205ENST00000466606 TTLL4Q14679 1199 aa6.97□□□□□ -1.29
EDEM3-205ENST00000466606 PPM1JQ5JR12 505 aa6.97□□□□□ -1.29
EDEM3-205ENST00000466606 BNC2Q6ZN30 1099 aaPredicted RBP6.97□□□□□ -1.29
EDEM3-205ENST00000466606 BEND4Q6ZU67 534 aa6.97□□□□□ -1.29
EDEM3-205ENST00000466606 ELMO3Q96BJ8 720 aa6.97□□□□□ -1.29
EDEM3-205ENST00000466606 HIF3AQ9Y2N7 669 aa6.97□□□□□ -1.29
EDEM3-205ENST00000466606 RAXQ9Y2V3 346 aa6.97□□□□□ -1.29
EDEM3-205ENST00000466606 RNGTTO60942 597 aaKnown RBP6.96□□□□□ -1.3
EDEM3-205ENST00000466606 NFICP08651 508 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 HNRNPUQ00839 825 aaKnown RBP eCLIP6.96□□□□□ -1.3
EDEM3-205ENST00000466606 NFKBIBQ15653 356 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 ZNF394Q53GI3 561 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 TRIM42Q8IWZ5 723 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 RNF34Q969K3 372 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 PLPPR2Q96GM1 343 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 RHOVQ96L33 236 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 ATXN3LQ9H3M9 355 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 C7orf69Q9H7B7 122 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 PIDD1Q9HB75 910 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 PICK1Q9NRD5 415 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 STOML1Q9UBI4 398 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 DAGLAQ9Y4D2 1042 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 PCDHGB7Q9Y5F8 929 aa6.96□□□□□ -1.3
EDEM3-205ENST00000466606 PRAMEF27A3QJZ7 478 aa6.95□□□□□ -1.3
EDEM3-205ENST00000466606 SCAMP3O14828 347 aaKnown RBP6.95□□□□□ -1.3
EDEM3-205ENST00000466606 NEFMP07197 916 aa6.95□□□□□ -1.3
EDEM3-205ENST00000466606 H2AFB1P0C5Y9 115 aa6.95□□□□□ -1.3
EDEM3-205ENST00000466606 H2AFB2P0C5Z0 115 aa6.95□□□□□ -1.3
EDEM3-205ENST00000466606 WIPI1Q5MNZ9 446 aaPredicted RBP6.95□□□□□ -1.3
EDEM3-205ENST00000466606 SNAP47Q5SQN1 464 aa6.95□□□□□ -1.3
EDEM3-205ENST00000466606 GOLM1Q8NBJ4 401 aa6.95□□□□□ -1.3
EDEM3-205ENST00000466606 GSX1Q9H4S2 264 aaPredicted RBP6.95□□□□□ -1.3
EDEM3-205ENST00000466606 ACSS3Q9H6R3 686 aa6.95□□□□□ -1.3
EDEM3-205ENST00000466606 SYNGAP1Q96PV0 1343 aa6.95□□□□□ -1.3
EDEM3-205ENST00000466606 FAM95CA0A1B0GW59 222 aa6.94□□□□□ -1.3
EDEM3-205ENST00000466606 TLR3O15455 904 aaKnown RBP6.94□□□□□ -1.3
EDEM3-205ENST00000466606 DYNC1LI2O43237 492 aaPredicted RBP6.94□□□□□ -1.3
EDEM3-205ENST00000466606 F13A1P00488 732 aa6.94□□□□□ -1.3
EDEM3-205ENST00000466606 HDLBPQ00341 1268 aaKnown RBP6.94□□□□□ -1.3
EDEM3-205ENST00000466606 LMNB2Q03252 620 aa6.94□□□□□ -1.3
EDEM3-205ENST00000466606 PWP1Q13610 501 aa6.94□□□□□ -1.3
EDEM3-205ENST00000466606 CLEC10AQ8IUN9 316 aa6.94□□□□□ -1.3
EDEM3-205ENST00000466606 FBXO27Q8NI29 283 aa6.94□□□□□ -1.3
EDEM3-205ENST00000466606 FAM83CQ9BQN1 747 aa6.94□□□□□ -1.3
EDEM3-205ENST00000466606 SEMA6CQ9H3T2 930 aa6.94□□□□□ -1.3
EDEM3-205ENST00000466606 SSU72Q9NP77 194 aaKnown RBP6.94□□□□□ -1.3
EDEM3-205ENST00000466606 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.93□□□□□ -1.3
EDEM3-205ENST00000466606 GARTP22102 1010 aa6.93□□□□□ -1.3
EDEM3-205ENST00000466606 ERVK-24P63145 666 aa6.93□□□□□ -1.3
EDEM3-205ENST00000466606 SCARA3Q6AZY7 606 aa6.93□□□□□ -1.3
EDEM3-205ENST00000466606 FBXL19Q6PCT2 694 aa6.93□□□□□ -1.3
EDEM3-205ENST00000466606 HDXQ7Z353 690 aa6.93□□□□□ -1.3
EDEM3-205ENST00000466606 UBE3DQ7Z6J8 389 aa6.93□□□□□ -1.3
EDEM3-205ENST00000466606 USP48Q86UV5 1035 aa6.93□□□□□ -1.3
EDEM3-205ENST00000466606 METTL16Q86W50 562 aaKnown RBP6.93□□□□□ -1.3
EDEM3-205ENST00000466606 SMYD4Q8IYR2 804 aaPredicted RBP6.93□□□□□ -1.3
EDEM3-205ENST00000466606 SHISA5Q8N114 240 aa6.93□□□□□ -1.3
EDEM3-205ENST00000466606 METTL5Q9NRN9 209 aaKnown RBP6.93□□□□□ -1.3
EDEM3-205ENST00000466606 ADAMTS1Q9UHI8 967 aa6.93□□□□□ -1.3
EDEM3-205ENST00000466606 K7ELQ4 463 aaPredicted RBP6.92□□□□□ -1.3
EDEM3-205ENST00000466606 FSTP19883 344 aa6.92□□□□□ -1.3
EDEM3-205ENST00000466606 ITGB7P26010 798 aa6.92□□□□□ -1.3
EDEM3-205ENST00000466606 EIF4A3P38919 411 aaKnown RBP6.92□□□□□ -1.3
EDEM3-205ENST00000466606 PRSS36Q5K4E3 855 aa6.92□□□□□ -1.3
EDEM3-205ENST00000466606 PAOXQ6QHF9 649 aa6.92□□□□□ -1.3
EDEM3-205ENST00000466606 CYFIP1Q7L576 1253 aa6.92□□□□□ -1.3
EDEM3-205ENST00000466606 FBXL6Q8N531 539 aa6.92□□□□□ -1.3
EDEM3-205ENST00000466606 RNF214Q8ND24 703 aa6.92□□□□□ -1.3
EDEM3-205ENST00000466606 EZH1Q92800 747 aaPredicted RBP6.92□□□□□ -1.3
EDEM3-205ENST00000466606 ISL2Q96A47 359 aa6.92□□□□□ -1.3
EDEM3-205ENST00000466606 MFSD14AQ96MC6 490 aa6.92□□□□□ -1.3
EDEM3-205ENST00000466606 YIPF2Q9BWQ6 316 aa6.92□□□□□ -1.3
EDEM3-205ENST00000466606 FAM221AA4D161 298 aa6.91□□□□□ -1.3
EDEM3-205ENST00000466606 GFRA2O00451 464 aa6.91□□□□□ -1.3
EDEM3-205ENST00000466606 NTF4P34130 210 aa6.91□□□□□ -1.3
EDEM3-205ENST00000466606 RACK1P63244 317 aaKnown RBP6.91□□□□□ -1.3
EDEM3-205ENST00000466606 RING1Q06587 406 aa6.91□□□□□ -1.3
EDEM3-205ENST00000466606 ZBTB37Q5TC79 503 aa6.91□□□□□ -1.3
EDEM3-205ENST00000466606 NT5DC4Q86YG4 428 aa6.91□□□□□ -1.3
EDEM3-205ENST00000466606 ZNF296Q8WUU4 475 aaPredicted RBP6.91□□□□□ -1.3
EDEM3-205ENST00000466606 GATAD2BQ8WXI9 593 aa6.91□□□□□ -1.3
EDEM3-205ENST00000466606 SNCAIPQ9Y6H5 919 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms