RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 RAB3GAP1Q15042 981 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 UBE3CQ15386 1083 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 HS1BP3Q53T59 392 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 CDC42EP5Q6NZY7 148 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 TEX11Q8IYF3 940 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 PCDHAC2Q9Y5I4 1007 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 RFX7Q2KHR2 1363 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 ASTN2O75129 1339 aaPredicted RBP11.9□□□□□ -0.5
PMF1-204ENST00000466489 ZNF532Q9HCE3 1301 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 TMEM88BA6NKF7 163 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 HIP1O00291 1037 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 RNF113AO15541 343 aaKnown RBP11.9□□□□□ -0.5
PMF1-204ENST00000466489 PPP1R12BO60237 982 aaPredicted RBP11.9□□□□□ -0.5
PMF1-204ENST00000466489 ENTPD3O75355 529 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 CELF2O95319 508 aaKnown RBP11.9□□□□□ -0.5
PMF1-204ENST00000466489 ADD2P35612 726 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 DDIT3P35638 169 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 APLP1P51693 650 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 PPP4CP60510 307 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 TTLL12Q14166 644 aaPredicted RBP11.9□□□□□ -0.5
PMF1-204ENST00000466489 RASA3Q14644 834 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 SKAP1Q86WV1 359 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 ZSCAN29Q8IWY8 852 aaPredicted RBP11.9□□□□□ -0.5
PMF1-204ENST00000466489 AMOTL1Q8IY63 956 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 C2orf69Q8N8R5 385 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 MIGA1Q8NAN2 632 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 RILPL2Q969X0 211 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 AIDAQ96BJ3 306 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 EDC3Q96F86 508 aaKnown RBP11.9□□□□□ -0.5
PMF1-204ENST00000466489 CDCA5Q96FF9 252 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 IDI2Q9BXS1 227 aa11.9□□□□□ -0.5
PMF1-204ENST00000466489 CRNKL1Q9BZJ0 848 aaKnown RBP11.9□□□□□ -0.5
PMF1-204ENST00000466489 RPAP1Q9BWH6 1393 aaPredicted RBP11.9□□□□□ -0.5
PMF1-204ENST00000466489 MYH1P12882 1939 aa11.9□□□□□ -0.51
PMF1-204ENST00000466489 PASKQ96RG2 1323 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 TRAF5O00463 557 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
PMF1-204ENST00000466489 HSPA6P17066 643 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 USP5P45974 858 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 FKBP1BP68106 108 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 PICALMQ13492 652 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 DCAF15Q66K64 600 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 ZNF384Q8TF68 577 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 FAM151AQ8WW52 585 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 APPBP2Q92624 585 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 PAPPA2Q9BXP8 1791 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 NAV1Q8NEY1 1877 aa11.89□□□□□ -0.51
PMF1-204ENST00000466489 CACNB3P54284 484 aa11.88□□□□□ -0.51
PMF1-204ENST00000466489 TCP10Q12799 353 aa11.88□□□□□ -0.51
PMF1-204ENST00000466489 TTC22Q5TAA0 569 aa11.88□□□□□ -0.51
PMF1-204ENST00000466489 ARMC9Q7Z3E5 817 aa11.88□□□□□ -0.51
PMF1-204ENST00000466489 TRIM34Q9BYJ4 488 aa11.88□□□□□ -0.51
PMF1-204ENST00000466489 GBA2Q9HCG7 927 aaPredicted RBP11.88□□□□□ -0.51
PMF1-204ENST00000466489 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
PMF1-204ENST00000466489 ABT1Q9ULW3 272 aaKnown RBP11.88□□□□□ -0.51
PMF1-204ENST00000466489 COL2A1P02458 1487 aaPredicted RBP11.88□□□□□ -0.51
PMF1-204ENST00000466489 MBD4O95243 580 aa11.87□□□□□ -0.51
PMF1-204ENST00000466489 HLA-DOAP06340 250 aa11.87□□□□□ -0.51
PMF1-204ENST00000466489 GNAT2P19087 354 aa11.87□□□□□ -0.51
PMF1-204ENST00000466489 RHBDL3P58872 404 aa11.87□□□□□ -0.51
PMF1-204ENST00000466489 KLHL40Q2TBA0 621 aa11.87□□□□□ -0.51
PMF1-204ENST00000466489 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
PMF1-204ENST00000466489 ADGRA1Q86SQ6 560 aa11.87□□□□□ -0.51
PMF1-204ENST00000466489 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
PMF1-204ENST00000466489 SYAP1Q96A49 352 aaPredicted RBP11.87□□□□□ -0.51
PMF1-204ENST00000466489 DHX36Q9H2U1 1008 aaKnown RBP11.87□□□□□ -0.51
PMF1-204ENST00000466489 DIAPH3Q9NSV4 1193 aa11.87□□□□□ -0.51
PMF1-204ENST00000466489 TCRBV5S4A2TA0A5A2 114 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 WDHD1O75717 1129 aaPredicted RBP11.86□□□□□ -0.51
PMF1-204ENST00000466489 MBD3O95983 291 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 MCM5P33992 734 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 IREB2P48200 963 aaKnown RBP11.86□□□□□ -0.51
PMF1-204ENST00000466489 CCDC173Q0VFZ6 552 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 NFIAQ12857 509 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 TGFBRAP1Q8WUH2 860 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 CSRNP1Q96S65 589 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 NACAP1Q9BZK3 213 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 TMEM39BQ9GZU3 492 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 OSBPL5Q9H0X9 879 aaPredicted RBP11.86□□□□□ -0.51
PMF1-204ENST00000466489 GRPEL1Q9HAV7 217 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 SCAF8Q9UPN6 1271 aaKnown RBP11.86□□□□□ -0.51
PMF1-204ENST00000466489 MYH8P13535 1937 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 FLT1P17948 1338 aa11.86□□□□□ -0.51
PMF1-204ENST00000466489 CNTNAP1P78357 1384 aa11.85□□□□□ -0.51
PMF1-204ENST00000466489 NCLP19338 710 aaKnown RBP11.85□□□□□ -0.51
PMF1-204ENST00000466489 CLCN1P35523 988 aa11.85□□□□□ -0.51
PMF1-204ENST00000466489 DYNLL1P63167 89 aaKnown RBP11.85□□□□□ -0.51
PMF1-204ENST00000466489 PAXIP1Q6ZW49 1069 aaPredicted RBP11.85□□□□□ -0.51
PMF1-204ENST00000466489 MAPKAPK5Q8IW41 473 aa11.85□□□□□ -0.51
PMF1-204ENST00000466489 RUFY2Q8WXA3 655 aa11.85□□□□□ -0.51
PMF1-204ENST00000466489 INTS4Q96HW7 963 aaKnown RBP11.85□□□□□ -0.51
PMF1-204ENST00000466489 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
PMF1-204ENST00000466489 ARMT1Q9H993 441 aa11.85□□□□□ -0.51
PMF1-204ENST00000466489 HELLSQ9NRZ9 838 aa11.85□□□□□ -0.51
PMF1-204ENST00000466489 ATP8A2Q9NTI2 1148 aa11.85□□□□□ -0.51
PMF1-204ENST00000466489 FAM198AQ9UFP1 575 aa11.85□□□□□ -0.51
PMF1-204ENST00000466489 BAZ2AQ9UIF9 1905 aaKnown RBP11.85□□□□□ -0.51
PMF1-204ENST00000466489 ATRNL1Q5VV63 1379 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 UNCXA6NJT0 531 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 GPAA1O43292 621 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms