RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 CHMP3Q9Y3E7 222 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 DYRK1BQ9Y463 629 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 ABCC6O95255 1503 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 N4BP2Q86UW6 1770 aaPredicted RBP4.5□□□□□ -1.69
SORT1-202ENST00000466471 LAMA3Q16787 3333 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 ITSN1Q15811 1721 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 CRB1P82279 1406 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 MYOM3Q5VTT5 1437 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 PHF20L1A8MW92 1017 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 MSTNO14793 375 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 GNRH1P01148 92 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 MZF1P28698 734 aaPredicted RBP4.49□□□□□ -1.69
SORT1-202ENST00000466471 MAPK8P45983 427 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 GDF10P55107 478 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 PSMA6P60900 246 aaKnown RBP4.49□□□□□ -1.69
SORT1-202ENST00000466471 ARID5AQ03989 594 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 NAA30Q147X3 362 aaPredicted RBP4.49□□□□□ -1.69
SORT1-202ENST00000466471 PLA2G4EQ3MJ16 856 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 NBPF6Q5VWK0 638 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 CAPN12Q6ZSI9 719 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 PODNQ7Z5L7 613 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 VPS37DQ86XT2 251 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 ZNF654Q8IZM8 581 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 GJD3Q8N144 294 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 BEND7Q8N7W2 519 aaPredicted RBP4.49□□□□□ -1.69
SORT1-202ENST00000466471 GMCL1Q96IK5 515 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 NBPF4Q96M43 638 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 IPO9Q96P70 1041 aaKnown RBP4.49□□□□□ -1.69
SORT1-202ENST00000466471 LNPKQ9C0E8 428 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 STRN4Q9NRL3 753 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 LRRC4BQ9NT99 713 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 AK5Q9Y6K8 562 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 PPLO60437 1756 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 INSRP06213 1382 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 PKD1L2Q7Z442 2459 aa4.49□□□□□ -1.69
SORT1-202ENST00000466471 SMG6Q86US8 1419 aaKnown RBP4.48□□□□□ -1.69
SORT1-202ENST00000466471 SLIT3O75094 1523 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 H7C1W4 665 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 GPR182O15218 404 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 ITGB2P05107 769 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 MX2P20592 715 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 GPC1P35052 558 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 SCTRP47872 440 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 SCNN1DP51172 638 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 NBPF10Q6P3W6 841 aaKnown RBP4.48□□□□□ -1.69
SORT1-202ENST00000466471 NBPF15Q8N660 670 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 MARCH10Q8NA82 808 aaPredicted RBP4.48□□□□□ -1.69
SORT1-202ENST00000466471 TRERF1Q96PN7 1200 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 SPOCK3Q9BQ16 436 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 BRINP2Q9C0B6 783 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 RRAGCQ9HB90 399 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 SCHIP1Q9P0W5 487 aaPredicted RBP4.48□□□□□ -1.69
SORT1-202ENST00000466471 SPG7Q9UQ90 795 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.48□□□□□ -1.69
SORT1-202ENST00000466471 TOGARAM1Q9Y4F4 1720 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 CPDO75976 1380 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 ANKRD30BQ9BXX2 1392 aa4.48□□□□□ -1.69
SORT1-202ENST00000466471 ANKARQ7Z5J8 1434 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 TNFRSF10BO14763 440 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 PCSK2P16519 638 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 MAP2K1Q02750 393 aaPredicted RBP4.47□□□□□ -1.69
SORT1-202ENST00000466471 AAMPQ13685 434 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 CHRNA2Q15822 529 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 DDB1Q16531 1140 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 COX20Q5RI15 118 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 CYP2U1Q7Z449 544 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 GRIP2Q9C0E4 1043 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 SRCIN1Q9C0H9 1055 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 NUCKS1Q9H1E3 243 aaKnown RBP4.47□□□□□ -1.69
SORT1-202ENST00000466471 TSPAN10Q9H1Z9 355 aaPredicted RBP4.47□□□□□ -1.69
SORT1-202ENST00000466471 CAPN10Q9HC96 672 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 ARHGEF10LQ9HCE6 1279 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 GPAMQ9HCL2 828 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 TIMMDC1Q9NPL8 285 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 FAM13BQ9NYF5 915 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 DDX41Q9UJV9 622 aaKnown RBP4.47□□□□□ -1.69
SORT1-202ENST00000466471 C5P01031 1676 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 LAMB4A4D0S4 1761 aa4.47□□□□□ -1.69
SORT1-202ENST00000466471 KDM6AO15550 1401 aaPredicted RBP4.46□□□□□ -1.69
SORT1-202ENST00000466471 KIF1BO60333 1816 aa4.46□□□□□ -1.69
SORT1-202ENST00000466471 TAF1LQ8IZX4 1826 aa4.46□□□□□ -1.69
SORT1-202ENST00000466471 LAMA2P24043 3122 aaKnown RBP4.46□□□□□ -1.69
SORT1-202ENST00000466471 PNMA6FA0A0J9YX94 578 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 A6NJY4 79 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 CDK2AP1O14519 115 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 PPP1R12BO60237 982 aaPredicted RBP4.46□□□□□ -1.7
SORT1-202ENST00000466471 ADAM23O75077 832 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 PHKA2P46019 1235 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 GJA8P48165 433 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 ST13P50502 369 aaKnown RBP4.46□□□□□ -1.7
SORT1-202ENST00000466471 SOX10P56693 466 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 CLN3Q13286 438 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 NFE2L2Q16236 605 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 HIF1AQ16665 826 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 C9orf131Q5VYM1 1079 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 HS2ST1Q7LGA3 356 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 GALNT6Q8NCL4 622 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 CSRNP1Q96S65 589 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 SIN3AQ96ST3 1273 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 OSBPL3Q9H4L5 887 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms