RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 SGMS1Q86VZ5 419 aa15.84■□□□□ 0.13
UBE4B-206ENST00000466379 TDRD7Q8NHU6 1098 aaKnown RBP15.84■□□□□ 0.13
UBE4B-206ENST00000466379 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
UBE4B-206ENST00000466379 SLC12A7Q9Y666 1083 aa15.84■□□□□ 0.13
UBE4B-206ENST00000466379 SLC4A8Q2Y0W8 1093 aa15.84■□□□□ 0.13
UBE4B-206ENST00000466379 CTR9Q6PD62 1173 aa15.84■□□□□ 0.13
UBE4B-206ENST00000466379 ZNF804AQ7Z570 1209 aa15.84■□□□□ 0.13
UBE4B-206ENST00000466379 PGBD1Q96JS3 809 aa15.84■□□□□ 0.13
UBE4B-206ENST00000466379 BRIP1Q9BX63 1249 aa15.84■□□□□ 0.13
UBE4B-206ENST00000466379 RNF41Q9H4P4 317 aaPredicted RBP15.84■□□□□ 0.13
UBE4B-206ENST00000466379 FAM217BQ9NTX9 383 aaPredicted RBP15.84■□□□□ 0.13
UBE4B-206ENST00000466379 USP17L12C9JPN9 530 aa15.83■□□□□ 0.13
UBE4B-206ENST00000466379 USP17L21D6R901 530 aa15.83■□□□□ 0.13
UBE4B-206ENST00000466379 UBE2Q2LH0YL09 131 aa15.83■□□□□ 0.13
UBE4B-206ENST00000466379 LIFRP42702 1097 aa15.83■□□□□ 0.13
UBE4B-206ENST00000466379 WTAPQ15007 396 aa15.83■□□□□ 0.13
UBE4B-206ENST00000466379 TSPY26PQ9H489 355 aa15.83■□□□□ 0.13
UBE4B-206ENST00000466379 ANAPC4Q9UJX5 808 aa15.83■□□□□ 0.13
UBE4B-206ENST00000466379 GGA1Q9UJY5 639 aa15.83■□□□□ 0.13
UBE4B-206ENST00000466379 ANKRD31Q8N7Z5 1873 aa15.83■□□□□ 0.12
UBE4B-206ENST00000466379 RANBP6O60518 1105 aaKnown RBP15.83■□□□□ 0.12
UBE4B-206ENST00000466379 CYP2D6P10635 497 aa15.83■□□□□ 0.12
UBE4B-206ENST00000466379 DIXDC1Q155Q3 683 aa15.83■□□□□ 0.12
UBE4B-206ENST00000466379 GIMAP6Q6P9H5 292 aa15.83■□□□□ 0.12
UBE4B-206ENST00000466379 USP28Q96RU2 1077 aa15.83■□□□□ 0.12
UBE4B-206ENST00000466379 ECM29Q5VYK3 1845 aa15.83■□□□□ 0.12
UBE4B-206ENST00000466379 DUOX1Q9NRD9 1551 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 GOLGA6L4A6NEF3 574 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 PLSCR1O15162 318 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 LDHBP07195 334 aaKnown RBP15.82■□□□□ 0.12
UBE4B-206ENST00000466379 MSL1Q68DK7 614 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 CRNKL1Q9BZJ0 848 aaKnown RBP15.82■□□□□ 0.12
UBE4B-206ENST00000466379 DCP1AQ9NPI6 582 aaPredicted RBP15.82■□□□□ 0.12
UBE4B-206ENST00000466379 POLLQ9UGP5 575 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 MYH2Q9UKX2 1941 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 ATP2B4P23634 1241 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 HOXA10P31260 410 aaPredicted RBP15.82■□□□□ 0.12
UBE4B-206ENST00000466379 NTRK3Q16288 839 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 SPTY2D1Q68D10 685 aaPredicted RBP15.82■□□□□ 0.12
UBE4B-206ENST00000466379 FBXO18Q8NFZ0 1043 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 WDR66Q8TBY9 1149 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 ALG1Q9BT22 464 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 CD209Q9NNX6 404 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 CFAP45Q9UL16 551 aa15.82■□□□□ 0.12
UBE4B-206ENST00000466379 ERICH2A1L162 156 aa15.81■□□□□ 0.12
UBE4B-206ENST00000466379 KIF28PB7ZC32 967 aa15.81■□□□□ 0.12
UBE4B-206ENST00000466379 BBOX1O75936 387 aa15.81■□□□□ 0.12
UBE4B-206ENST00000466379 POLR3DP05423 398 aaPredicted RBP15.81■□□□□ 0.12
UBE4B-206ENST00000466379 SART3Q15020 963 aaKnown RBP15.81■□□□□ 0.12
UBE4B-206ENST00000466379 TMEM132AQ24JP5 1023 aa15.81■□□□□ 0.12
UBE4B-206ENST00000466379 TBC1D16Q8TBP0 767 aa15.81■□□□□ 0.12
UBE4B-206ENST00000466379 ESR2Q92731 530 aa15.81■□□□□ 0.12
UBE4B-206ENST00000466379 UBAC1Q9BSL1 405 aa15.81■□□□□ 0.12
UBE4B-206ENST00000466379 TNKSO95271 1327 aa15.81■□□□□ 0.12
UBE4B-206ENST00000466379 RXRBP28702 533 aa15.8■□□□□ 0.12
UBE4B-206ENST00000466379 OLFM4Q6UX06 510 aa15.8■□□□□ 0.12
UBE4B-206ENST00000466379 SYNE3Q6ZMZ3 975 aa15.8■□□□□ 0.12
UBE4B-206ENST00000466379 CMTR1Q8N1G2 835 aaKnown RBP15.8■□□□□ 0.12
UBE4B-206ENST00000466379 BICD2Q8TD16 824 aa15.8■□□□□ 0.12
UBE4B-206ENST00000466379 CRAMP1Q96RY5 1269 aa15.8■□□□□ 0.12
UBE4B-206ENST00000466379 C6orf229H3BNL8 230 aa15.8■□□□□ 0.12
UBE4B-206ENST00000466379 PPEF1O14829 653 aaPredicted RBP15.8■□□□□ 0.12
UBE4B-206ENST00000466379 CDKL5O76039 1030 aa15.8■□□□□ 0.12
UBE4B-206ENST00000466379 IARSP41252 1262 aaKnown RBP15.8■□□□□ 0.12
UBE4B-206ENST00000466379 CAMK4Q16566 473 aa15.8■□□□□ 0.12
UBE4B-206ENST00000466379 CPLX2Q6PUV4 134 aaKnown RBP15.8■□□□□ 0.12
UBE4B-206ENST00000466379 C15orf52Q6ZUT6 534 aaKnown RBP15.8■□□□□ 0.12
UBE4B-206ENST00000466379 NUP133Q8WUM0 1156 aa15.8■□□□□ 0.12
UBE4B-206ENST00000466379 SLC26A6Q9BXS9 759 aa15.8■□□□□ 0.12
UBE4B-206ENST00000466379 KLRG2A4D1S0 409 aaPredicted RBP15.79■□□□□ 0.12
UBE4B-206ENST00000466379 CCDC82Q8N4S0 544 aa15.79■□□□□ 0.12
UBE4B-206ENST00000466379 SH3RF3Q8TEJ3 882 aaPredicted RBP15.79■□□□□ 0.12
UBE4B-206ENST00000466379 ZNF396Q96N95 335 aaPredicted RBP15.79■□□□□ 0.12
UBE4B-206ENST00000466379 DACT1Q9NYF0 836 aa15.79■□□□□ 0.12
UBE4B-206ENST00000466379 LAMB1P07942 1786 aa15.79■□□□□ 0.12
UBE4B-206ENST00000466379 MMP10P09238 476 aa15.79■□□□□ 0.12
UBE4B-206ENST00000466379 USP17L8P0C7I0 530 aa15.79■□□□□ 0.12
UBE4B-206ENST00000466379 SEC23AQ15436 765 aa15.79■□□□□ 0.12
UBE4B-206ENST00000466379 RTN1Q16799 776 aa15.79■□□□□ 0.12
UBE4B-206ENST00000466379 ZNF654Q8IZM8 581 aa15.79■□□□□ 0.12
UBE4B-206ENST00000466379 NLGN1Q8N2Q7 840 aa15.79■□□□□ 0.12
UBE4B-206ENST00000466379 KIAA1551Q9HCM1 1747 aa15.79■□□□□ 0.12
UBE4B-206ENST00000466379 RIMBP2O15034 1052 aa15.78■□□□□ 0.12
UBE4B-206ENST00000466379 ENAHQ8N8S7 591 aaPredicted RBP15.78■□□□□ 0.12
UBE4B-206ENST00000466379 ZSCAN10Q96SZ4 725 aaPredicted RBP15.78■□□□□ 0.12
UBE4B-206ENST00000466379 ATP8A2Q9NTI2 1148 aa15.78■□□□□ 0.12
UBE4B-206ENST00000466379 MCM9Q9NXL9 1143 aa15.78■□□□□ 0.12
UBE4B-206ENST00000466379 RCOR1Q9UKL0 485 aa15.78■□□□□ 0.12
UBE4B-206ENST00000466379 NR1I2O75469 434 aa15.78■□□□□ 0.12
UBE4B-206ENST00000466379 LETM1O95202 739 aaPredicted RBP15.78■□□□□ 0.12
UBE4B-206ENST00000466379 GUCY1A2P33402 732 aa15.78■□□□□ 0.12
UBE4B-206ENST00000466379 KIF23Q02241 960 aaPredicted RBP15.78■□□□□ 0.12
UBE4B-206ENST00000466379 FAM47AQ5JRC9 791 aa15.78■□□□□ 0.12
UBE4B-206ENST00000466379 KRT40Q6A162 431 aa15.78■□□□□ 0.12
UBE4B-206ENST00000466379 CLIC4Q9Y696 253 aa15.78■□□□□ 0.12
UBE4B-206ENST00000466379 ZBTB22O15209 634 aa15.77■□□□□ 0.12
UBE4B-206ENST00000466379 NMT2O60551 498 aa15.77■□□□□ 0.12
UBE4B-206ENST00000466379 IL1R1P14778 569 aa15.77■□□□□ 0.12
UBE4B-206ENST00000466379 USP5P45974 858 aa15.77■□□□□ 0.12
UBE4B-206ENST00000466379 SSRP1Q08945 709 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms