RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 USP16Q9Y5T5 823 aa8.33□□□□□ -1.08
TPM3-214ENST00000466010 ERVV-1B6SEH8 477 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 KCNQ3O43525 872 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 CAMTA2O94983 1202 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 IGHA2P01877 340 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 NEFLP07196 543 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 MZF1P28698 734 aaPredicted RBP8.32□□□□□ -1.08
TPM3-214ENST00000466010 RIPK4P57078 832 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 FOXK2Q01167 660 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 DCTN1Q14203 1278 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 ARID5BQ14865 1188 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 MTFR1Q15390 333 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 TBC1D9BQ66K14 1250 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 TPTE2Q6XPS3 522 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 BICDL1Q6ZP65 573 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 NOP9Q86U38 636 aaKnown RBP8.32□□□□□ -1.08
TPM3-214ENST00000466010 NBPF5PQ86XG9 351 aaPredicted RBP8.32□□□□□ -1.08
TPM3-214ENST00000466010 CNKSR1Q969H4 720 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 RUNDC1Q96C34 613 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 WWC3Q9ULE0 1092 aa8.32□□□□□ -1.08
TPM3-214ENST00000466010 KDM2BQ8NHM5 1336 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 ARFGEF1Q9Y6D6 1849 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 N4BP2Q86UW6 1770 aaPredicted RBP8.31□□□□□ -1.08
TPM3-214ENST00000466010 STAU1O95793 577 aaKnown RBP8.31□□□□□ -1.08
TPM3-214ENST00000466010 FSHRP23945 695 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 CHRNA5P30532 468 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 TMPOP42166 694 aaKnown RBP8.31□□□□□ -1.08
TPM3-214ENST00000466010 SMTNP53814 917 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 EIF4A1P60842 406 aaKnown RBP8.31□□□□□ -1.08
TPM3-214ENST00000466010 CALD1Q05682 793 aaKnown RBP8.31□□□□□ -1.08
TPM3-214ENST00000466010 TJAP1Q5JTD0 557 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 PRR5LQ6MZQ0 368 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 KIF6Q6ZMV9 814 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 C2CD5Q86YS7 1000 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 TTC16Q8NEE8 873 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 ZNF516Q92618 1163 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 CRELD1Q96HD1 420 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
TPM3-214ENST00000466010 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 NYXQ9GZU5 481 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 PRKRIP1Q9H875 184 aaPredicted RBP8.31□□□□□ -1.08
TPM3-214ENST00000466010 TSPYL4Q9UJ04 414 aa8.31□□□□□ -1.08
TPM3-214ENST00000466010 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.31□□□□□ -1.08
TPM3-214ENST00000466010 BRCA1P38398 1863 aaKnown RBP8.31□□□□□ -1.08
TPM3-214ENST00000466010 LMNB1P20700 586 aa8.3□□□□□ -1.08
TPM3-214ENST00000466010 TRIM32Q13049 653 aa8.3□□□□□ -1.08
TPM3-214ENST00000466010 TBCELQ5QJ74 424 aa8.3□□□□□ -1.08
TPM3-214ENST00000466010 STYK1Q6J9G0 422 aa8.3□□□□□ -1.08
TPM3-214ENST00000466010 GJD3Q8N144 294 aa8.3□□□□□ -1.08
TPM3-214ENST00000466010 TMPRSS4Q9NRS4 437 aa8.3□□□□□ -1.08
TPM3-214ENST00000466010 POLIQ9UNA4 740 aa8.3□□□□□ -1.08
TPM3-214ENST00000466010 TMA7Q9Y2S6 64 aaKnown RBP8.3□□□□□ -1.08
TPM3-214ENST00000466010 IBTKQ9P2D0 1353 aaPredicted RBP8.3□□□□□ -1.08
TPM3-214ENST00000466010 LAMB4A4D0S4 1761 aa8.3□□□□□ -1.08
TPM3-214ENST00000466010 CEP350Q5VT06 3117 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 HOXB7P09629 217 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 GTF2E1P29083 439 aaPredicted RBP8.29□□□□□ -1.08
TPM3-214ENST00000466010 GTF2F1P35269 517 aaKnown RBP eCLIP8.29□□□□□ -1.08
TPM3-214ENST00000466010 DNM1Q05193 864 aaKnown RBP8.29□□□□□ -1.08
TPM3-214ENST00000466010 NBPF10Q6P3W6 841 aaKnown RBP8.29□□□□□ -1.08
TPM3-214ENST00000466010 ANKRD13AQ8IZ07 590 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 EHBP1Q8NDI1 1231 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 KCTD12Q96CX2 325 aaKnown RBP8.29□□□□□ -1.08
TPM3-214ENST00000466010 MASTLQ96GX5 879 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 MIS18AQ9NYP9 233 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 RNF181Q9P0P0 153 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 NIP7Q9Y221 180 aaKnown RBP eCLIP8.29□□□□□ -1.08
TPM3-214ENST00000466010 BCORQ6W2J9 1755 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 KDM3BQ7LBC6 1761 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 RNF123Q5XPI4 1314 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 MAP3K15Q6ZN16 1313 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 LTBP3Q9NS15 1303 aa8.29□□□□□ -1.08
TPM3-214ENST00000466010 DLEC1Q9Y238 1755 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 SENP3-EIF4A1A0A087X0R7 540 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 POTEB3A0JP26 581 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 SERTM1A2A2V5 107 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 PRAMEF22A3QJZ6 481 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 KLRG2A4D1S0 409 aaPredicted RBP8.28□□□□□ -1.08
TPM3-214ENST00000466010 ANKRD62A6NC57 917 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 TOMM70O94826 608 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 SRGNP10124 158 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 NPR1P16066 1061 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 ALDH1B1P30837 517 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 TLR1Q15399 786 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 POTEBQ6S5H4 581 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 ATCAYQ86WG3 371 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 C16orf71Q8IYS4 520 aaPredicted RBP8.28□□□□□ -1.08
TPM3-214ENST00000466010 CCDC116Q8IYX3 515 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 EDEM1Q92611 657 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 ZNF622Q969S3 477 aaKnown RBP eCLIP8.28□□□□□ -1.08
TPM3-214ENST00000466010 CDK15Q96Q40 435 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 CSRNP1Q96S65 589 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 ACBD3Q9H3P7 528 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 LRFN2Q9ULH4 789 aa8.28□□□□□ -1.08
TPM3-214ENST00000466010 AFDNP55196 1824 aaKnown RBP8.28□□□□□ -1.08
TPM3-214ENST00000466010 DLG5Q8TDM6 1919 aa8.27□□□□□ -1.09
TPM3-214ENST00000466010 CHL1O00533 1208 aa8.27□□□□□ -1.09
TPM3-214ENST00000466010 CDK2AP1O14519 115 aa8.27□□□□□ -1.09
TPM3-214ENST00000466010 RPLP1P05386 114 aaKnown RBP8.27□□□□□ -1.09
TPM3-214ENST00000466010 DNAJA1P31689 397 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms