RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 SH3TC1Q8TE82 1336 aa15.91■□□□□ 0.14
TGFBR3-204ENST00000465892 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
TGFBR3-204ENST00000465892 NKX2-3Q8TAU0 364 aa15.91■□□□□ 0.14
TGFBR3-204ENST00000465892 MAN1B1Q9UKM7 699 aa15.91■□□□□ 0.14
TGFBR3-204ENST00000465892 AKR1B15C9JRZ8 316 aaPredicted RBP15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 CEP112Q8N8E3 955 aa15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 POLR2DO15514 142 aaKnown RBP15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 ZMYM1Q5SVZ6 1142 aa15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 SLC9C2Q5TAH2 1124 aa15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 KRT40Q6A162 431 aa15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 CTR9Q6PD62 1173 aa15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 HNRNPLLQ8WVV9 542 aaKnown RBP15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 MYL10Q9BUA6 226 aa15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 HELLSQ9NRZ9 838 aa15.9■□□□□ 0.14
TGFBR3-204ENST00000465892 RICTORQ6R327 1708 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 A0A087WZG4 1122 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 RNF40O75150 1001 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 GUCY2CP25092 1073 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 CASP1P29466 404 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 PTPAQ15257 358 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 RBM33Q96EV2 1170 aaKnown RBP15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 SEC31BQ9NQW1 1179 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 CTAGE9A4FU28 777 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 FGAP02671 866 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 CORO7P57737 925 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 IGSF22Q8N9C0 903 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 ZNF594Q96JF6 807 aaPredicted RBP15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 RAB21Q9UL25 225 aa15.89■□□□□ 0.13
TGFBR3-204ENST00000465892 CTAGE15A4D2H0 777 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 IFIT1P09914 478 aaKnown RBP15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 CTAGE8P0CG41 777 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 ANTXR2P58335 489 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 RESP18Q5W5W9 173 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 CTAGE6Q86UF2 777 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 PPFIBP1Q86W92 1011 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 CTAGE4Q8IX94 777 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 PPM1EQ8WY54 764 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 SENP2Q9HC62 589 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 SERTAD1Q9UHV2 236 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 ENC1O14682 589 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 CASP14P31944 242 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 USP5P45974 858 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 PLEKHO1Q53GL0 409 aaPredicted RBP15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 RALYLQ86SE5 291 aaKnown RBP15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 CCDC82Q8N4S0 544 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 DEF6Q9H4E7 631 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 GSPT2Q8IYD1 628 aaKnown RBP15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 SMYD4Q8IYR2 804 aaPredicted RBP15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 MSANTD4Q8NCY6 345 aa15.88■□□□□ 0.13
TGFBR3-204ENST00000465892 RNF113AO15541 343 aaKnown RBP15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 ZNF18P17022 549 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 CDC25AP30304 524 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 LIG3P49916 1009 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 FAM69CQ0P6D2 419 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 POSTNQ15063 836 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 IMMTQ16891 758 aaKnown RBP15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 ANKRD13DQ6ZTN6 518 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 JMYQ8N9B5 988 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 FAM71BQ8TC56 605 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 NR1I3Q14994 352 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 TTC39AQ5SRH9 613 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 USP49Q70CQ1 688 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 MAP3K14Q99558 947 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 EHD4Q9H223 541 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 TFR2Q9UP52 801 aa15.87■□□□□ 0.13
TGFBR3-204ENST00000465892 METTL22Q9BUU2 404 aaPredicted RBP15.86■□□□□ 0.13
TGFBR3-204ENST00000465892 GEMIN8Q9NWZ8 242 aaKnown RBP15.86■□□□□ 0.13
TGFBR3-204ENST00000465892 HDAC6Q9UBN7 1215 aa15.86■□□□□ 0.13
TGFBR3-204ENST00000465892 TRIM10Q9UDY6 481 aa15.86■□□□□ 0.13
TGFBR3-204ENST00000465892 RGPD8O14715 1765 aaPredicted RBP15.86■□□□□ 0.13
TGFBR3-204ENST00000465892 LRRC24Q50LG9 513 aa15.86■□□□□ 0.13
TGFBR3-204ENST00000465892 TTC19Q6DKK2 380 aaPredicted RBP15.86■□□□□ 0.13
TGFBR3-204ENST00000465892 MKRN1Q9UHC7 482 aaKnown RBP15.86■□□□□ 0.13
TGFBR3-204ENST00000465892 HOOK1Q9UJC3 728 aaKnown RBP15.86■□□□□ 0.13
TGFBR3-204ENST00000465892 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 FOXP2O15409 715 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 SRGAP2O75044 1071 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 CCT6AP40227 531 aaKnown RBP15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 AFMP43652 599 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 YY1AP1Q9H869 796 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 PIK3C2AO00443 1686 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 PPP6R2O75170 966 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 SYF2O95926 243 aaKnown RBP15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 METAP2P50579 478 aaKnown RBP eCLIP15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 FXR1P51114 621 aaKnown RBP eCLIP15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 MDM2Q00987 491 aaPredicted RBP15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 NUTM2AQ8IVF1 878 aaPredicted RBP15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 AFAP1L1Q8TED9 768 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 IP6K1Q92551 441 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 CAPZA3Q96KX2 299 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 INCENPQ9NQS7 918 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
TGFBR3-204ENST00000465892 PI16Q6UXB8 463 aa15.84■□□□□ 0.13
TGFBR3-204ENST00000465892 CCDC85AQ96PX6 553 aaPredicted RBP15.84■□□□□ 0.13
TGFBR3-204ENST00000465892 SLF1Q9BQI6 1058 aa15.84■□□□□ 0.13
TGFBR3-204ENST00000465892 POTEB2H3BUK9 544 aa15.84■□□□□ 0.13
TGFBR3-204ENST00000465892 RPS6KA5O75582 802 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms