RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 KCNJ4P48050 445 aa10.61□□□□□ -0.71
UBA3-208ENST00000465627 NECTIN1Q15223 517 aa10.61□□□□□ -0.71
UBA3-208ENST00000465627 MCMDC2Q4G0Z9 681 aa10.61□□□□□ -0.71
UBA3-208ENST00000465627 CST9Q5W186 159 aa10.61□□□□□ -0.71
UBA3-208ENST00000465627 APPBP2Q92624 585 aa10.61□□□□□ -0.71
UBA3-208ENST00000465627 PALD1Q9ULE6 856 aa10.61□□□□□ -0.71
UBA3-208ENST00000465627 SCN9AQ15858 1988 aa10.6□□□□□ -0.71
UBA3-208ENST00000465627 M0R2C6 588 aa10.6□□□□□ -0.71
UBA3-208ENST00000465627 IGSF3O75054 1194 aa10.6□□□□□ -0.71
UBA3-208ENST00000465627 PDE6AP16499 860 aa10.6□□□□□ -0.71
UBA3-208ENST00000465627 CC2D2BQ6DHV5 1058 aa10.6□□□□□ -0.71
UBA3-208ENST00000465627 FBXO22Q8NEZ5 403 aa10.6□□□□□ -0.71
UBA3-208ENST00000465627 ZNF622Q969S3 477 aaKnown RBP eCLIP10.6□□□□□ -0.714e-6■□□□□ 8.2
UBA3-208ENST00000465627 CD209Q9NNX6 404 aa10.6□□□□□ -0.71
UBA3-208ENST00000465627 ANO2Q9NQ90 1003 aa10.6□□□□□ -0.71
UBA3-208ENST00000465627 GNL3LQ9NVN8 582 aaKnown RBP10.6□□□□□ -0.71
UBA3-208ENST00000465627 IQSEC3Q9UPP2 1182 aaPredicted RBP10.6□□□□□ -0.71
UBA3-208ENST00000465627 PSME4Q14997 1843 aa10.6□□□□□ -0.71
UBA3-208ENST00000465627 SPTBN5Q9NRC6 3674 aaKnown RBP10.6□□□□□ -0.71
UBA3-208ENST00000465627 FAM205AQ6ZU69 1335 aa10.59□□□□□ -0.71
UBA3-208ENST00000465627 IQCA1LA6NCM1 817 aa10.59□□□□□ -0.71
UBA3-208ENST00000465627 ANAPC15P60006 121 aa10.59□□□□□ -0.71
UBA3-208ENST00000465627 CCDC129Q6ZRS4 1044 aa10.59□□□□□ -0.71
UBA3-208ENST00000465627 ZNF687Q8N1G0 1237 aa10.59□□□□□ -0.71
UBA3-208ENST00000465627 PUS7LQ9H0K6 701 aaKnown RBP10.59□□□□□ -0.71
UBA3-208ENST00000465627 PRDM6Q9NQX0 595 aa10.59□□□□□ -0.71
UBA3-208ENST00000465627 TLL2Q9Y6L7 1015 aa10.59□□□□□ -0.71
UBA3-208ENST00000465627 LAMA4Q16363 1823 aa10.59□□□□□ -0.71
UBA3-208ENST00000465627 ZNF532Q9HCE3 1301 aa10.58□□□□□ -0.72
UBA3-208ENST00000465627 COL4A5P29400 1685 aa10.58□□□□□ -0.72
UBA3-208ENST00000465627 TRAF5O00463 557 aa10.58□□□□□ -0.72
UBA3-208ENST00000465627 LRRFIP1Q32MZ4 808 aaKnown RBP10.58□□□□□ -0.72
UBA3-208ENST00000465627 TSGA10IPQ3SY00 556 aa10.58□□□□□ -0.72
UBA3-208ENST00000465627 SLC9C2Q5TAH2 1124 aa10.58□□□□□ -0.72
UBA3-208ENST00000465627 VPS53Q5VIR6 699 aa10.58□□□□□ -0.72
UBA3-208ENST00000465627 ZSCAN25Q6NSZ9 544 aa10.58□□□□□ -0.72
UBA3-208ENST00000465627 DPP8Q6V1X1 898 aaPredicted RBP10.58□□□□□ -0.72
UBA3-208ENST00000465627 ZNF804AQ7Z570 1209 aa10.58□□□□□ -0.72
UBA3-208ENST00000465627 CTU1Q7Z7A3 348 aaKnown RBP10.58□□□□□ -0.72
UBA3-208ENST00000465627 TTLL6Q8N841 843 aa10.58□□□□□ -0.72
UBA3-208ENST00000465627 DSCC1Q9BVC3 393 aa10.58□□□□□ -0.72
UBA3-208ENST00000465627 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.58□□□□□ -0.72
UBA3-208ENST00000465627 STK25O00506 426 aa10.57□□□□□ -0.72
UBA3-208ENST00000465627 IDH1O75874 414 aaKnown RBP10.57□□□□□ -0.72
UBA3-208ENST00000465627 COL9A1P20849 921 aa10.57□□□□□ -0.72
UBA3-208ENST00000465627 ANP32AP39687 249 aaKnown RBP10.57□□□□□ -0.72
UBA3-208ENST00000465627 MAP3K12Q12852 859 aa10.57□□□□□ -0.72
UBA3-208ENST00000465627 GRIK5Q16478 980 aa10.57□□□□□ -0.72
UBA3-208ENST00000465627 GRIPAP1Q4V328 841 aa10.57□□□□□ -0.72
UBA3-208ENST00000465627 TMED8Q6PL24 325 aaPredicted RBP10.57□□□□□ -0.72
UBA3-208ENST00000465627 ADGRA1Q86SQ6 560 aa10.57□□□□□ -0.72
UBA3-208ENST00000465627 VPS37DQ86XT2 251 aa10.57□□□□□ -0.72
UBA3-208ENST00000465627 RNF166Q96A37 237 aaPredicted RBP10.57□□□□□ -0.72
UBA3-208ENST00000465627 NSUN4Q96CB9 384 aaKnown RBP10.57□□□□□ -0.72
UBA3-208ENST00000465627 COA1Q9GZY4 146 aa10.57□□□□□ -0.72
UBA3-208ENST00000465627 RBM8AQ9Y5S9 174 aaKnown RBP10.57□□□□□ -0.72
UBA3-208ENST00000465627 SNX14Q9Y5W7 946 aa10.57□□□□□ -0.72
UBA3-208ENST00000465627 TAF6LQ9Y6J9 622 aa10.57□□□□□ -0.72
UBA3-208ENST00000465627 KIAA0100Q14667 2235 aaKnown RBP10.57□□□□□ -0.72
UBA3-208ENST00000465627 RPAP1Q9BWH6 1393 aaPredicted RBP10.57□□□□□ -0.72
UBA3-208ENST00000465627 PAPPA2Q9BXP8 1791 aa10.56□□□□□ -0.72
UBA3-208ENST00000465627 C6orf229H3BNL8 230 aa10.56□□□□□ -0.72
UBA3-208ENST00000465627 GPAA1O43292 621 aa10.56□□□□□ -0.72
UBA3-208ENST00000465627 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
UBA3-208ENST00000465627 HSPD1P10809 573 aaKnown RBP10.56□□□□□ -0.72
UBA3-208ENST00000465627 PRDX5P30044 214 aa10.56□□□□□ -0.72
UBA3-208ENST00000465627 EPHX2P34913 555 aa10.56□□□□□ -0.72
UBA3-208ENST00000465627 MAGEB6Q8N7X4 407 aa10.56□□□□□ -0.72
UBA3-208ENST00000465627 WDR66Q8TBY9 1149 aa10.56□□□□□ -0.72
UBA3-208ENST00000465627 SNX21Q969T3 373 aa10.56□□□□□ -0.72
UBA3-208ENST00000465627 IPO9Q96P70 1041 aaKnown RBP10.56□□□□□ -0.72
UBA3-208ENST00000465627 STRBPQ96SI9 672 aaKnown RBP10.56□□□□□ -0.72
UBA3-208ENST00000465627 PSMD1Q99460 953 aa10.56□□□□□ -0.72
UBA3-208ENST00000465627 RIOK1Q9BRS2 568 aaKnown RBP10.56□□□□□ -0.72
UBA3-208ENST00000465627 ZMYM6O95789 1325 aa10.56□□□□□ -0.72
UBA3-208ENST00000465627 CENPFP49454 3210 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 SLC27A2O14975 620 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 ECM2O94769 699 aaPredicted RBP10.55□□□□□ -0.72
UBA3-208ENST00000465627 MECOMQ03112 1051 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 KIAA2012Q0VF49 1180 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 COL9A3Q14050 684 aaPredicted RBP10.55□□□□□ -0.72
UBA3-208ENST00000465627 RABEP1Q15276 862 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 WASHC4Q2M389 1173 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 ARSIQ5FYB1 569 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 CREB3L3Q68CJ9 461 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 KIAA1211Q6ZU35 1233 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 CDK5RAP2Q96SN8 1893 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 HTTP42858 3142 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 MYH2Q9UKX2 1941 aa10.55□□□□□ -0.72
UBA3-208ENST00000465627 C21orf2O43822 256 aa10.54□□□□□ -0.72
UBA3-208ENST00000465627 ALX1Q15699 326 aa10.54□□□□□ -0.72
UBA3-208ENST00000465627 CCDC93Q567U6 631 aa10.54□□□□□ -0.72
UBA3-208ENST00000465627 CERS5Q8N5B7 392 aa10.54□□□□□ -0.72
UBA3-208ENST00000465627 EYA3Q99504 573 aa10.54□□□□□ -0.72
UBA3-208ENST00000465627 MFRPQ9BY79 579 aa10.54□□□□□ -0.72
UBA3-208ENST00000465627 TBC1D2Q9BYX2 928 aa10.54□□□□□ -0.72
UBA3-208ENST00000465627 TM6SF1Q9BZW5 370 aa10.54□□□□□ -0.72
UBA3-208ENST00000465627 ZC3H12CQ9C0D7 883 aaKnown RBP10.54□□□□□ -0.72
UBA3-208ENST00000465627 LRP2BPQ9P2M1 347 aa10.54□□□□□ -0.72
UBA3-208ENST00000465627 HACL1Q9UJ83 578 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms