RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-208ENST00000465125 USP48Q86UV5 1035 aa29.33■■■□□ 2.29
RERE-208ENST00000465125 SMC1BQ8NDV3 1235 aa29.33■■■□□ 2.29
RERE-208ENST00000465125 RBM46Q8TBY0 533 aaKnown RBP29.33■■■□□ 2.29
RERE-208ENST00000465125 DEFB129Q9H1M3 183 aa29.33■■■□□ 2.29
RERE-208ENST00000465125 FLT1P17948 1338 aa29.33■■■□□ 2.29
RERE-208ENST00000465125 CCDC171Q6TFL3 1326 aa29.33■■■□□ 2.29
RERE-208ENST00000465125 PRKAB2O43741 272 aa29.32■■■□□ 2.28
RERE-208ENST00000465125 ZNF589Q86UQ0 364 aaPredicted RBP29.32■■■□□ 2.28
RERE-208ENST00000465125 SDR42E1Q8WUS8 393 aa29.32■■■□□ 2.28
RERE-208ENST00000465125 FAM151AQ8WW52 585 aa29.32■■■□□ 2.28
RERE-208ENST00000465125 NAV1Q8NEY1 1877 aa29.31■■■□□ 2.28
RERE-208ENST00000465125 DDRGK1Q96HY6 314 aa29.31■■■□□ 2.28
RERE-208ENST00000465125 OSBPL5Q9H0X9 879 aaPredicted RBP29.31■■■□□ 2.28
RERE-208ENST00000465125 RPAP1Q9BWH6 1393 aaPredicted RBP29.3■■■□□ 2.28
RERE-208ENST00000465125 TMEM39BQ9GZU3 492 aa29.3■■■□□ 2.28
RERE-208ENST00000465125 ATP8A2Q9NTI2 1148 aa29.3■■■□□ 2.28
RERE-208ENST00000465125 COL2A1P02458 1487 aaPredicted RBP29.29■■■□□ 2.28
RERE-208ENST00000465125 SGSM2O43147 1006 aa29.28■■■□□ 2.28
RERE-208ENST00000465125 APPP05067 770 aa29.28■■■□□ 2.28
RERE-208ENST00000465125 ZSCAN29Q8IWY8 852 aaPredicted RBP29.28■■■□□ 2.28
RERE-208ENST00000465125 ZFPM1Q8IX07 1006 aa29.28■■■□□ 2.28
RERE-208ENST00000465125 ESYT1Q9BSJ8 1104 aa29.28■■■□□ 2.28
RERE-208ENST00000465125 DCP1AQ9NPI6 582 aaPredicted RBP29.28■■■□□ 2.28
RERE-208ENST00000465125 GSG1L2A8MUP6 293 aa29.27■■■□□ 2.28
RERE-208ENST00000465125 NACAP1Q9BZK3 213 aa29.27■■■□□ 2.28
RERE-208ENST00000465125 IL25Q9H293 177 aa29.27■■■□□ 2.28
RERE-208ENST00000465125 SAP30BPQ9UHR5 308 aaKnown RBP29.27■■■□□ 2.28
RERE-208ENST00000465125 DDX60LQ5H9U9 1706 aaKnown RBP29.27■■■□□ 2.28
RERE-208ENST00000465125 PATL2C9JE40 543 aaKnown RBP29.26■■■□□ 2.27
RERE-208ENST00000465125 GIMAP6Q6P9H5 292 aa29.26■■■□□ 2.27
RERE-208ENST00000465125 CDCA5Q96FF9 252 aa29.26■■■□□ 2.27
RERE-208ENST00000465125 MYH1P12882 1939 aa29.26■■■□□ 2.27
RERE-208ENST00000465125 TRAF5O00463 557 aa29.25■■■□□ 2.27
RERE-208ENST00000465125 FSTL1Q12841 308 aa29.25■■■□□ 2.27
RERE-208ENST00000465125 VPS53Q5VIR6 699 aa29.25■■■□□ 2.27
RERE-208ENST00000465125 PRAMEF18Q5VWM3 479 aa29.25■■■□□ 2.27
RERE-208ENST00000465125 DLK2Q6UY11 383 aa29.25■■■□□ 2.27
RERE-208ENST00000465125 TEPSINQ96N21 525 aa29.25■■■□□ 2.27
RERE-208ENST00000465125 MCM9Q9NXL9 1143 aa29.25■■■□□ 2.27
RERE-208ENST00000465125 MKRN1Q9UHC7 482 aaKnown RBP29.25■■■□□ 2.27
RERE-208ENST00000465125 ATRNL1Q5VV63 1379 aa29.25■■■□□ 2.27
RERE-208ENST00000465125 ITGBL1O95965 494 aaPredicted RBP29.24■■■□□ 2.27
RERE-208ENST00000465125 TDO2P48775 406 aa29.24■■■□□ 2.27
RERE-208ENST00000465125 CSRNP1Q96S65 589 aa29.24■■■□□ 2.27
RERE-208ENST00000465125 DHX36Q9H2U1 1008 aaKnown RBP29.24■■■□□ 2.27
RERE-208ENST00000465125 EPB41L4AQ9HCS5 686 aaPredicted RBP29.24■■■□□ 2.27
RERE-208ENST00000465125 DDTLA6NHG4 134 aaPredicted RBP29.23■■■□□ 2.27
RERE-208ENST00000465125 HSPD1P10809 573 aaKnown RBP29.23■■■□□ 2.27
RERE-208ENST00000465125 SH3BP5LQ7L8J4 393 aa29.23■■■□□ 2.27
RERE-208ENST00000465125 CDAN1Q8IWY9 1227 aa29.23■■■□□ 2.27
RERE-208ENST00000465125 AMOTL1Q8IY63 956 aa29.23■■■□□ 2.27
RERE-208ENST00000465125 PALD1Q9ULE6 856 aa29.23■■■□□ 2.27
RERE-208ENST00000465125 BAZ2AQ9UIF9 1905 aaKnown RBP29.23■■■□□ 2.27
RERE-208ENST00000465125 FOXP2O15409 715 aa29.22■■■□□ 2.27
RERE-208ENST00000465125 POLR3DP05423 398 aaPredicted RBP29.22■■■□□ 2.27
RERE-208ENST00000465125 HLA-DOAP06340 250 aa29.22■■■□□ 2.27
RERE-208ENST00000465125 NF2P35240 595 aa29.22■■■□□ 2.27
RERE-208ENST00000465125 SUPT20HL1Q3ZLR7 823 aa29.22■■■□□ 2.27
RERE-208ENST00000465125 NBPF12Q5TAG4 269 aaPredicted RBP29.22■■■□□ 2.27
RERE-208ENST00000465125 IFNL3Q8IZI9 196 aa29.22■■■□□ 2.27
RERE-208ENST00000465125 HOOK2Q96ED9 719 aa29.22■■■□□ 2.27
RERE-208ENST00000465125 NAPBQ9H115 298 aa29.22■■■□□ 2.27
RERE-208ENST00000465125 SLC4A8Q2Y0W8 1093 aa29.21■■■□□ 2.27
RERE-208ENST00000465125 KIAA1211Q6ZU35 1233 aa29.21■■■□□ 2.27
RERE-208ENST00000465125 DSCC1Q9BVC3 393 aa29.21■■■□□ 2.27
RERE-208ENST00000465125 ARPP21Q9UBL0 812 aaPredicted RBP29.21■■■□□ 2.27
RERE-208ENST00000465125 TTC6Q86TZ1 520 aa29.2■■■□□ 2.26
RERE-208ENST00000465125 ZNF408Q9H9D4 720 aa29.2■■■□□ 2.26
RERE-208ENST00000465125 SSC5DA1L4H1 1573 aa29.19■■■□□ 2.26
RERE-208ENST00000465125 USP17L12C9JPN9 530 aa29.19■■■□□ 2.26
RERE-208ENST00000465125 USP17L21D6R901 530 aa29.19■■■□□ 2.26
RERE-208ENST00000465125 FMR1Q06787 632 aaKnown RBP eCLIP29.19■■■□□ 2.26
RERE-208ENST00000465125 ALX1Q15699 326 aa29.19■■■□□ 2.26
RERE-208ENST00000465125 CTR9Q6PD62 1173 aa29.19■■■□□ 2.26
RERE-208ENST00000465125 ZMYM6O95789 1325 aa29.19■■■□□ 2.26
RERE-208ENST00000465125 PASKQ96RG2 1323 aa29.19■■■□□ 2.26
RERE-208ENST00000465125 LAMB1P07942 1786 aa29.18■■■□□ 2.26
RERE-208ENST00000465125 ANO2Q9NQ90 1003 aa29.18■■■□□ 2.26
RERE-208ENST00000465125 PI4KBQ9UBF8 816 aa29.18■■■□□ 2.26
RERE-208ENST00000465125 TRPM7Q96QT4 1865 aa29.17■■■□□ 2.26
RERE-208ENST00000465125 CYP2D6P10635 497 aa29.17■■■□□ 2.26
RERE-208ENST00000465125 SBK1Q52WX2 424 aa29.17■■■□□ 2.26
RERE-208ENST00000465125 DCAF15Q66K64 600 aa29.17■■■□□ 2.26
RERE-208ENST00000465125 SIPA1L1O43166 1804 aa29.16■■■□□ 2.26
RERE-208ENST00000465125 CELF2O95319 508 aaKnown RBP29.16■■■□□ 2.26
RERE-208ENST00000465125 PTH1RQ03431 593 aa29.16■■■□□ 2.26
RERE-208ENST00000465125 C12orf60Q5U649 245 aa29.16■■■□□ 2.26
RERE-208ENST00000465125 CRACR2BQ8N4Y2 399 aaPredicted RBP29.16■■■□□ 2.26
RERE-208ENST00000465125 TRIM34Q9BYJ4 488 aa29.16■■■□□ 2.26
RERE-208ENST00000465125 CYP2D7A0A087X1C5 515 aa29.15■■■□□ 2.26
RERE-208ENST00000465125 MINDY4BA8MYZ0 360 aa29.15■■■□□ 2.26
RERE-208ENST00000465125 FGAP02671 866 aa29.15■■■□□ 2.26
RERE-208ENST00000465125 PLCD1P51178 756 aa29.15■■■□□ 2.26
RERE-208ENST00000465125 EHD4Q9H223 541 aa29.15■■■□□ 2.26
RERE-208ENST00000465125 LSG1Q9H089 658 aaKnown RBP29.14■■■□□ 2.26
RERE-208ENST00000465125 CTNNA3Q9UI47 895 aa29.14■■■□□ 2.26
RERE-208ENST00000465125 HERC5Q9UII4 1024 aaKnown RBP29.14■■■□□ 2.26
RERE-208ENST00000465125 SERPINB13Q9UIV8 391 aa29.14■■■□□ 2.26
RERE-208ENST00000465125 PPP1R12BO60237 982 aaPredicted RBP29.13■■■□□ 2.25
RERE-208ENST00000465125 REC8O95072 547 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms