RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 FAM177BA6PVY3 158 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 DDX3YO15523 660 aaKnown RBP3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 ZNF862O60290 1169 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 CILPO75339 1184 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 ECEL1O95672 775 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 CYP11A1P05108 521 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 SPINK2P20155 84 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 MAOBP27338 520 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 CDC25BP30305 580 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 GBP2P32456 591 aaPredicted RBP3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 GSTM4Q03013 218 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 LRRC14Q15048 493 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 POU4F3Q15319 338 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 KIF4BQ2VIQ3 1234 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 LLGL2Q6P1M3 1020 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 IGF2-ASQ6U949 168 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 MPRIPQ6WCQ1 1025 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 Q6ZS46 218 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 KIAA1211Q6ZU35 1233 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 SLITRK4Q8IW52 837 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 TMEM130Q8N3G9 435 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 DCAF11Q8TEB1 546 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 CARD10Q9BWT7 1032 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 ACBD3Q9H3P7 528 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 CCDC86Q9H6F5 360 aaKnown RBP3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 USP21Q9UK80 565 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 PCDHB5Q9Y5E4 795 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 PCDHGC5Q9Y5F6 944 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 PCDHGB7Q9Y5F8 929 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 MINDY4BA8MYZ0 360 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 GFRA2O00451 464 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 TNNI2P48788 182 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 RING1Q06587 406 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 PAK2Q13177 524 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 MAP3K11Q16584 847 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 NAALADL2Q58DX5 795 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 BNC2Q6ZN30 1099 aaPredicted RBP3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 FAM196AQ6ZSG2 479 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 KIAA0825Q8IV33 1275 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 GATAD2BQ8WXI9 593 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 SLC7A3Q8WY07 619 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 SPON2Q9BUD6 331 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 TMPRSS13Q9BYE2 586 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 GSX1Q9H4S2 264 aaPredicted RBP3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 CCSER2Q9H7U1 834 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 SUGCTQ9HAC7 445 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 PRR36Q9H6K5 1346 aa3.13□□□□□ -1.91
NUCKS1-202ENST00000464938 F6X3S4 739 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 WISP1O95388 367 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 TIAF1O95411 115 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 F13A1P00488 732 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 TGFB1P01137 390 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 ATF4P18848 351 aaPredicted RBP3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 CRKP46108 304 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 ZC3H12AQ5D1E8 599 aaKnown RBP3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 EXOSC6Q5RKV6 272 aaKnown RBP3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 CYFIP1Q7L576 1253 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 GOLM1Q8NBJ4 401 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 SMG8Q8ND04 991 aaKnown RBP3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 GPBAR1Q8TDU6 330 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 WDR89Q96FK6 387 aaPredicted RBP3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 SEC16BQ96JE7 1060 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 SPATA32Q96LK8 384 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 CORO1BQ9BR76 489 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 MRPL18Q9H0U6 180 aaKnown RBP3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 MIR1-1HGQ9H1L0 117 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 SUPT16HQ9Y5B9 1047 aaKnown RBP3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 TACC3Q9Y6A5 838 aa3.12□□□□□ -1.91
NUCKS1-202ENST00000464938 F8W735 103 aaPredicted RBP3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 AOC2O75106 756 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 ATE1O95260 518 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 FGRP09769 529 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 LIG1P18858 919 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 SOX9P48436 509 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 NLRP12P59046 1061 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 RPL6Q02878 288 aaKnown RBP3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 FAM160A1Q05DH4 1040 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 COL9A2Q14055 689 aaPredicted RBP3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 SEPT6Q14141 434 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 MPP2Q14168 576 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 HP1BP3Q5SSJ5 553 aaPredicted RBP3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 MAP1SQ66K74 1059 aaPredicted RBP3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 DTX1Q86Y01 620 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 REXO1Q8N1G1 1221 aaKnown RBP3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 FBXO27Q8NI29 283 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 UBASH3BQ8TF42 649 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 KCNB2Q92953 911 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 GPRASP2Q96D09 838 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 WDR18Q9BV38 432 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 EHMT1Q9H9B1 1298 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 CAPN10Q9HC96 672 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 UBP1Q9NZI7 540 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 ADGRE2Q9UHX3 823 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 POLR3KQ9Y2Y1 108 aaPredicted RBP3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 SNCAIPQ9Y6H5 919 aa3.11□□□□□ -1.91
NUCKS1-202ENST00000464938 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 NTF4P34130 210 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 CDK8P49336 464 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 ERVK-24P63145 666 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms