RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 CEP126Q9P2H0 1117 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 FBXO3Q9UK99 471 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 DENND2AQ9ULE3 1009 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 GABRQQ9UN88 632 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 NR2E3Q9Y5X4 410 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 ZHX2Q9Y6X8 837 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 ZNF316A6NFI3 1004 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-220ENST00000464800 PHF20L1A8MW92 1017 aa18.2■□□□□ 0.5
MCF2L-220ENST00000464800 ADCY3O60266 1144 aa18.2■□□□□ 0.5
MCF2L-220ENST00000464800 ENTPD3O75355 529 aa18.2■□□□□ 0.5
MCF2L-220ENST00000464800 PTPRAP18433 802 aa18.2■□□□□ 0.5
MCF2L-220ENST00000464800 GADL1Q6ZQY3 521 aa18.2■□□□□ 0.5
MCF2L-220ENST00000464800 ZGPATQ8N5A5 531 aaKnown RBP18.2■□□□□ 0.5
MCF2L-220ENST00000464800 IDI2Q9BXS1 227 aa18.2■□□□□ 0.5
MCF2L-220ENST00000464800 UNC93B1Q9H1C4 597 aa18.2■□□□□ 0.5
MCF2L-220ENST00000464800 SLC45A1Q9Y2W3 748 aa18.2■□□□□ 0.5
MCF2L-220ENST00000464800 PHKA1P46020 1223 aa18.19■□□□□ 0.5
MCF2L-220ENST00000464800 ZSCAN29Q8IWY8 852 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-220ENST00000464800 SMCR8Q8TEV9 937 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-220ENST00000464800 AFG3L2Q9Y4W6 797 aa18.19■□□□□ 0.5
MCF2L-220ENST00000464800 LRRFIP2Q9Y608 721 aaKnown RBP18.19■□□□□ 0.5
MCF2L-220ENST00000464800 GAKO14976 1311 aa18.19■□□□□ 0.5
MCF2L-220ENST00000464800 ATAD5Q96QE3 1844 aa18.19■□□□□ 0.5
MCF2L-220ENST00000464800 LOC285556D6RIA3 1793 aa18.18■□□□□ 0.5
MCF2L-220ENST00000464800 TNPO2O14787 897 aaKnown RBP18.18■□□□□ 0.5
MCF2L-220ENST00000464800 SGPL1O95470 568 aa18.18■□□□□ 0.5
MCF2L-220ENST00000464800 INHAP05111 366 aa18.18■□□□□ 0.5
MCF2L-220ENST00000464800 UBTFL1P0CB47 393 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-220ENST00000464800 FLT3LGP49771 235 aa18.18■□□□□ 0.5
MCF2L-220ENST00000464800 DZIP1Q86YF9 867 aaKnown RBP18.18■□□□□ 0.5
MCF2L-220ENST00000464800 PRO3102Q9H379 93 aa18.18■□□□□ 0.5
MCF2L-220ENST00000464800 E9PSI1 815 aa18.17■□□□□ 0.5
MCF2L-220ENST00000464800 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-220ENST00000464800 ELNP15502 786 aa18.17■□□□□ 0.5
MCF2L-220ENST00000464800 SLF2Q8IX21 1173 aa18.17■□□□□ 0.5
MCF2L-220ENST00000464800 PXYLP1Q8TE99 480 aa18.17■□□□□ 0.5
MCF2L-220ENST00000464800 ALPK3Q96L96 1907 aa18.17■□□□□ 0.5
MCF2L-220ENST00000464800 TRIM75PA6NK02 468 aa18.16■□□□□ 0.5
MCF2L-220ENST00000464800 CTNND1O60716 968 aaKnown RBP18.16■□□□□ 0.5
MCF2L-220ENST00000464800 CAPN2P17655 700 aa18.16■□□□□ 0.5
MCF2L-220ENST00000464800 IL15P40933 162 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-220ENST00000464800 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
MCF2L-220ENST00000464800 IRF5Q13568 498 aa18.16■□□□□ 0.5
MCF2L-220ENST00000464800 SH3BP5LQ7L8J4 393 aa18.16■□□□□ 0.5
MCF2L-220ENST00000464800 DOCK3Q8IZD9 2030 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 DDTLA6NHG4 134 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-220ENST00000464800 ZBTB22O15209 634 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 EVI5O60447 810 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 PICALMQ13492 652 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 ALDH1L2Q3SY69 923 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 CCDC102BQ68D86 513 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 DEFB118Q96PH6 123 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 SMC4Q9NTJ3 1288 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 TAOK2Q9UL54 1235 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 AGTPBP1Q9UPW5 1226 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 PDS5AQ29RF7 1337 aaKnown RBP18.15■□□□□ 0.5
MCF2L-220ENST00000464800 SZT2Q5T011 3432 aa18.15■□□□□ 0.5
MCF2L-220ENST00000464800 RANBP2P49792 3224 aaKnown RBP18.15■□□□□ 0.5
MCF2L-220ENST00000464800 TFRCP02786 760 aaKnown RBP18.14■□□□□ 0.49
MCF2L-220ENST00000464800 ADORA1P30542 326 aa18.14■□□□□ 0.49
MCF2L-220ENST00000464800 BTDP43251 543 aa18.14■□□□□ 0.49
MCF2L-220ENST00000464800 RASGRF1Q13972 1273 aa18.14■□□□□ 0.49
MCF2L-220ENST00000464800 COA7Q96BR5 231 aa18.14■□□□□ 0.49
MCF2L-220ENST00000464800 DDX4Q9NQI0 724 aaKnown RBP18.14■□□□□ 0.49
MCF2L-220ENST00000464800 PAK6Q9NQU5 681 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-220ENST00000464800 ABCF2Q9UG63 623 aa18.14■□□□□ 0.49
MCF2L-220ENST00000464800 PNMA3Q9UL41 463 aa18.14■□□□□ 0.49
MCF2L-220ENST00000464800 MROH7-TTC4A0A0A0MT08 1334 aa18.14■□□□□ 0.49
MCF2L-220ENST00000464800 A0A1W2PPC1 479 aa18.13■□□□□ 0.49
MCF2L-220ENST00000464800 SPTY2D1Q68D10 685 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-220ENST00000464800 ANKRD13CQ8N6S4 541 aa18.13■□□□□ 0.49
MCF2L-220ENST00000464800 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-220ENST00000464800 PA2G4Q9UQ80 394 aaKnown RBP18.13■□□□□ 0.49
MCF2L-220ENST00000464800 HDAC5Q9UQL6 1122 aa18.13■□□□□ 0.49
MCF2L-220ENST00000464800 SLURP2P0DP57 97 aa18.12■□□□□ 0.49
MCF2L-220ENST00000464800 FAM110CQ1W6H9 321 aa18.12■□□□□ 0.49
MCF2L-220ENST00000464800 CCDC84Q86UT8 332 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-220ENST00000464800 FAM163AQ96GL9 167 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-220ENST00000464800 SLFN5Q08AF3 891 aa18.11■□□□□ 0.49
MCF2L-220ENST00000464800 TREML2Q5T2D2 321 aa18.11■□□□□ 0.49
MCF2L-220ENST00000464800 PROCA1Q8NCQ7 364 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-220ENST00000464800 CRISPLD2Q9H0B8 497 aa18.11■□□□□ 0.49
MCF2L-220ENST00000464800 COPRSQ9NQ92 184 aa18.11■□□□□ 0.49
MCF2L-220ENST00000464800 DDX60LQ5H9U9 1706 aaKnown RBP18.1■□□□□ 0.49
MCF2L-220ENST00000464800 COL2A1P02458 1487 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-220ENST00000464800 TBC1D12O60347 775 aa18.1■□□□□ 0.49
MCF2L-220ENST00000464800 MECOMQ03112 1051 aa18.1■□□□□ 0.49
MCF2L-220ENST00000464800 ERICH6Q7L0X2 663 aa18.1■□□□□ 0.49
MCF2L-220ENST00000464800 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.1■□□□□ 0.49
MCF2L-220ENST00000464800 OSBPL5Q9H0X9 879 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-220ENST00000464800 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.1■□□□□ 0.49
MCF2L-220ENST00000464800 GPR75-ASB3A0A0A6YYF3 556 aa18.09■□□□□ 0.49
MCF2L-220ENST00000464800 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
MCF2L-220ENST00000464800 TIMM10P62072 90 aa18.09■□□□□ 0.49
MCF2L-220ENST00000464800 MVPQ14764 893 aaKnown RBP18.09■□□□□ 0.49
MCF2L-220ENST00000464800 NECAB2Q7Z6G3 386 aa18.09■□□□□ 0.49
MCF2L-220ENST00000464800 PAWRQ96IZ0 340 aaKnown RBP18.09■□□□□ 0.49
MCF2L-220ENST00000464800 AKAP2Q9Y2D5 859 aa18.09■□□□□ 0.49
MCF2L-220ENST00000464800 PLXNB2O15031 1838 aa18.08■□□□□ 0.48
MCF2L-220ENST00000464800 A0A1B0GUL7 405 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms