RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 MPRIPQ6WCQ1 1025 aa10.01□□□□□ -0.81
PTCD3-205ENST00000464541 FANCD2OSQ96PS1 177 aa10.01□□□□□ -0.81
PTCD3-205ENST00000464541 FAM83CQ9BQN1 747 aa10.01□□□□□ -0.81
PTCD3-205ENST00000464541 STOML1Q9UBI4 398 aa10.01□□□□□ -0.81
PTCD3-205ENST00000464541 SNCAIPQ9Y6H5 919 aa10.01□□□□□ -0.81
PTCD3-205ENST00000464541 GSC2O15499 205 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 SGO2Q562F6 1265 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 BEND4Q6ZU67 534 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 RNF34Q969K3 372 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 ACSS3Q9H6R3 686 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 DISC1Q9NRI5 854 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 FAM105AQ9NUU6 356 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 KBTBD4Q9NVX7 518 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 TLR6Q9Y2C9 796 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 PCDHB5Q9Y5E4 795 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 TACC3Q9Y6A5 838 aa10□□□□□ -0.81
PTCD3-205ENST00000464541 CAMK2GQ13555 558 aaPredicted RBP9.99□□□□□ -0.81
PTCD3-205ENST00000464541 MAP7Q14244 749 aa9.99□□□□□ -0.81
PTCD3-205ENST00000464541 HDXQ7Z353 690 aa9.99□□□□□ -0.81
PTCD3-205ENST00000464541 RNF214Q8ND24 703 aa9.99□□□□□ -0.81
PTCD3-205ENST00000464541 KCNF1Q9H3M0 494 aa9.99□□□□□ -0.81
PTCD3-205ENST00000464541 PIDD1Q9HB75 910 aa9.99□□□□□ -0.81
PTCD3-205ENST00000464541 KCNQ5Q9NR82 932 aa9.99□□□□□ -0.81
PTCD3-205ENST00000464541 FAM95CA0A1B0GW59 222 aa9.98□□□□□ -0.81
PTCD3-205ENST00000464541 FURINP09958 794 aa9.98□□□□□ -0.81
PTCD3-205ENST00000464541 RING1Q06587 406 aa9.98□□□□□ -0.81
PTCD3-205ENST00000464541 SEPT6Q14141 434 aa9.98□□□□□ -0.81
PTCD3-205ENST00000464541 CDPF1Q6NVV7 123 aa9.98□□□□□ -0.81
PTCD3-205ENST00000464541 ELMO3Q96BJ8 720 aa9.98□□□□□ -0.81
PTCD3-205ENST00000464541 C7orf69Q9H7B7 122 aa9.98□□□□□ -0.81
PTCD3-205ENST00000464541 FANCGO15287 622 aa9.97□□□□□ -0.81
PTCD3-205ENST00000464541 PF4P02776 101 aa9.97□□□□□ -0.81
PTCD3-205ENST00000464541 RXRBP28702 533 aa9.97□□□□□ -0.81
PTCD3-205ENST00000464541 PTPN11Q06124 597 aaPredicted RBP9.97□□□□□ -0.81
PTCD3-205ENST00000464541 PAOXQ6QHF9 649 aa9.97□□□□□ -0.81
PTCD3-205ENST00000464541 FBLIM1Q8WUP2 373 aa9.97□□□□□ -0.81
PTCD3-205ENST00000464541 K7ELQ4 463 aaPredicted RBP9.96□□□□□ -0.82
PTCD3-205ENST00000464541 RBM25P49756 843 aaKnown RBP9.96□□□□□ -0.82
PTCD3-205ENST00000464541 CYFIP1Q7L576 1253 aa9.96□□□□□ -0.82
PTCD3-205ENST00000464541 GATAD2BQ8WXI9 593 aa9.96□□□□□ -0.82
PTCD3-205ENST00000464541 SEMA6CQ9H3T2 930 aa9.96□□□□□ -0.82
PTCD3-205ENST00000464541 COPRSQ9NQ92 184 aa9.96□□□□□ -0.82
PTCD3-205ENST00000464541 RAB6AP20340 208 aa9.95□□□□□ -0.82
PTCD3-205ENST00000464541 RPL6Q02878 288 aaKnown RBP9.95□□□□□ -0.82
PTCD3-205ENST00000464541 TTLL4Q14679 1199 aa9.95□□□□□ -0.82
PTCD3-205ENST00000464541 WIPI1Q5MNZ9 446 aaPredicted RBP9.95□□□□□ -0.82
PTCD3-205ENST00000464541 SNAP47Q5SQN1 464 aa9.95□□□□□ -0.82
PTCD3-205ENST00000464541 RNF43Q68DV7 783 aa9.95□□□□□ -0.82
PTCD3-205ENST00000464541 LRFN4Q6PJG9 635 aa9.95□□□□□ -0.82
PTCD3-205ENST00000464541 SMYD4Q8IYR2 804 aaPredicted RBP9.95□□□□□ -0.82
PTCD3-205ENST00000464541 PLPPR2Q96GM1 343 aa9.95□□□□□ -0.82
PTCD3-205ENST00000464541 ROBO2Q9HCK4 1378 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 DCDC2CA8MYV0 355 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 MINDY4BA8MYZ0 360 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 CILPO75339 1184 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 FSTP19883 344 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 EIF4A3P38919 411 aaKnown RBP9.94□□□□□ -0.82
PTCD3-205ENST00000464541 INPP5AQ14642 412 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 ZBTB37Q5TC79 503 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.94□□□□□ -0.82
PTCD3-205ENST00000464541 KCT2Q8NC54 265 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 SEMA6BQ9H3T3 888 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 PICK1Q9NRD5 415 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 PCOLCE2Q9UKZ9 415 aa9.94□□□□□ -0.82
PTCD3-205ENST00000464541 SUPT16HQ9Y5B9 1047 aaKnown RBP9.94□□□□□ -0.82
PTCD3-205ENST00000464541 HMX2A2RU54 273 aa9.93□□□□□ -0.82
PTCD3-205ENST00000464541 FAM221AA4D161 298 aa9.93□□□□□ -0.82
PTCD3-205ENST00000464541 GFRA2O00451 464 aa9.93□□□□□ -0.82
PTCD3-205ENST00000464541 BPNT1O95861 308 aa9.93□□□□□ -0.82
PTCD3-205ENST00000464541 NFICP08651 508 aa9.93□□□□□ -0.82
PTCD3-205ENST00000464541 GARTP22102 1010 aa9.93□□□□□ -0.82
PTCD3-205ENST00000464541 USP48Q86UV5 1035 aa9.93□□□□□ -0.82
PTCD3-205ENST00000464541 C12orf40Q86WS4 652 aa9.93□□□□□ -0.82
PTCD3-205ENST00000464541 GOLM1Q8NBJ4 401 aa9.93□□□□□ -0.82
PTCD3-205ENST00000464541 JARID2Q92833 1246 aaPredicted RBP9.93□□□□□ -0.82
PTCD3-205ENST00000464541 ZNF428Q96B54 188 aa9.93□□□□□ -0.82
PTCD3-205ENST00000464541 F6X3S4 739 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 RNGTTO60942 597 aaKnown RBP9.92□□□□□ -0.82
PTCD3-205ENST00000464541 IGLV1-40P01703 118 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 NEFMP07197 916 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 NFIAQ12857 509 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 MPP2Q14168 576 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 NFKBIBQ15653 356 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 PPM1JQ5JR12 505 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 BNC2Q6ZN30 1099 aaPredicted RBP9.92□□□□□ -0.82
PTCD3-205ENST00000464541 FAM196AQ6ZSG2 479 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 METTL16Q86W50 562 aaKnown RBP9.92□□□□□ -0.82
PTCD3-205ENST00000464541 ISL2Q96A47 359 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 DBNDD2Q9BQY9 259 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 DAGLAQ9Y4D2 1042 aa9.92□□□□□ -0.82
PTCD3-205ENST00000464541 E9PSI1 815 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 GREM1O60565 184 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 ADAM23O75077 832 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 F13A1P00488 732 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 HCLS1P14317 486 aaPredicted RBP9.91□□□□□ -0.82
PTCD3-205ENST00000464541 NTF4P34130 210 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 FAM160A1Q05DH4 1040 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 FBXL19Q6PCT2 694 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 SEZ6L2Q6UXD5 910 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 GIMAP7Q8NHV1 300 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms