RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 MAST2Q6P0Q8 1798 aa17.08■□□□□ 0.33
COL5A1-205ENST00000464187 VPS37CA5D8V6 355 aaPredicted RBP17.08■□□□□ 0.33
COL5A1-205ENST00000464187 E7EWF7 191 aa17.08■□□□□ 0.33
COL5A1-205ENST00000464187 TDO2P48775 406 aa17.08■□□□□ 0.33
COL5A1-205ENST00000464187 STK3Q13188 491 aa17.08■□□□□ 0.33
COL5A1-205ENST00000464187 GTF3C6Q969F1 213 aa17.08■□□□□ 0.33
COL5A1-205ENST00000464187 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
COL5A1-205ENST00000464187 SLF2Q8IX21 1173 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 LARGE2Q8N3Y3 721 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 RBSNQ9H1K0 784 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 VPS33BQ9H267 617 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 CCDC88AQ3V6T2 1871 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 USP17L3A6NCW0 530 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 USP17L4A6NCW7 530 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 YDJCA8MPS7 323 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 BAG3O95817 575 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 DACT2Q5SW24 774 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 LARP1BQ659C4 914 aaKnown RBP17.07■□□□□ 0.32
COL5A1-205ENST00000464187 USP17L1Q7RTZ2 530 aa17.07■□□□□ 0.32
COL5A1-205ENST00000464187 FAM163AQ96GL9 167 aaPredicted RBP17.07■□□□□ 0.32
COL5A1-205ENST00000464187 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
COL5A1-205ENST00000464187 CRNKL1Q9BZJ0 848 aaKnown RBP17.07■□□□□ 0.32
COL5A1-205ENST00000464187 TTF2Q9UNY4 1162 aaKnown RBP17.07■□□□□ 0.32
COL5A1-205ENST00000464187 PPP4CP60510 307 aa17.06■□□□□ 0.32
COL5A1-205ENST00000464187 DNM1Q05193 864 aaKnown RBP17.06■□□□□ 0.32
COL5A1-205ENST00000464187 CDC37L1Q7L3B6 337 aa17.06■□□□□ 0.32
COL5A1-205ENST00000464187 SYAP1Q96A49 352 aaPredicted RBP17.06■□□□□ 0.32
COL5A1-205ENST00000464187 LRRC2Q9BYS8 371 aa17.06■□□□□ 0.32
COL5A1-205ENST00000464187 TAOK3Q9H2K8 898 aa17.06■□□□□ 0.32
COL5A1-205ENST00000464187 BRCA1P38398 1863 aaKnown RBP17.06■□□□□ 0.32
COL5A1-205ENST00000464187 GPR75-ASB3A0A0A6YYF3 556 aa17.05■□□□□ 0.32
COL5A1-205ENST00000464187 FIBPO43427 364 aa17.05■□□□□ 0.32
COL5A1-205ENST00000464187 HMGB1P09429 215 aaKnown RBP17.05■□□□□ 0.32
COL5A1-205ENST00000464187 PDCP20941 246 aa17.05■□□□□ 0.32
COL5A1-205ENST00000464187 BTDP43251 543 aa17.05■□□□□ 0.32
COL5A1-205ENST00000464187 FKBP1AP62942 108 aaKnown RBP17.05■□□□□ 0.32
COL5A1-205ENST00000464187 NBPF3Q9H094 633 aa17.05■□□□□ 0.32
COL5A1-205ENST00000464187 RRAGDQ9NQL2 400 aaPredicted RBP17.05■□□□□ 0.32
COL5A1-205ENST00000464187 GAKO14976 1311 aa17.05■□□□□ 0.32
COL5A1-205ENST00000464187 PDIA4P13667 645 aaKnown RBP17.05■□□□□ 0.32
COL5A1-205ENST00000464187 IARSP41252 1262 aaKnown RBP17.05■□□□□ 0.32
COL5A1-205ENST00000464187 GIMAP6Q6P9H5 292 aa17.05■□□□□ 0.32
COL5A1-205ENST00000464187 DHX32Q7L7V1 743 aaKnown RBP17.05■□□□□ 0.32
COL5A1-205ENST00000464187 TBC1D10CQ8IV04 446 aa17.05■□□□□ 0.32
COL5A1-205ENST00000464187 SH3RF3Q8TEJ3 882 aaPredicted RBP17.05■□□□□ 0.32
COL5A1-205ENST00000464187 BRF1Q92994 677 aa17.05■□□□□ 0.32
COL5A1-205ENST00000464187 DCP1AQ9NPI6 582 aaPredicted RBP17.05■□□□□ 0.32
COL5A1-205ENST00000464187 ATP8A2Q9NTI2 1148 aa17.05■□□□□ 0.32
COL5A1-205ENST00000464187 NFKBIEO00221 500 aa17.04■□□□□ 0.32
COL5A1-205ENST00000464187 UBE2HP62256 183 aa17.04■□□□□ 0.32
COL5A1-205ENST00000464187 EXOSC10Q01780 885 aaKnown RBP17.04■□□□□ 0.32
COL5A1-205ENST00000464187 CERS3Q8IU89 383 aa17.04■□□□□ 0.32
COL5A1-205ENST00000464187 PPP1R9BQ96SB3 815 aa17.04■□□□□ 0.32
COL5A1-205ENST00000464187 FHDC1Q9C0D6 1143 aaPredicted RBP17.04■□□□□ 0.32
COL5A1-205ENST00000464187 JAK2O60674 1132 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 SCNN1DP51172 638 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 CCDC173Q0VFZ6 552 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 KIAA0825Q8IV33 1275 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 AGXT2Q9BYV1 514 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 DAGLAQ9Y4D2 1042 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 SCN9AQ15858 1988 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 COL4A5P29400 1685 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 CTDSPL2Q05D32 466 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 TRDNQ13061 729 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 NIM1KQ8IY84 436 aa17.03■□□□□ 0.32
COL5A1-205ENST00000464187 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.31
COL5A1-205ENST00000464187 PFKFB2O60825 505 aa17.02■□□□□ 0.31
COL5A1-205ENST00000464187 PLCG2P16885 1265 aa17.02■□□□□ 0.31
COL5A1-205ENST00000464187 USP5P45974 858 aa17.02■□□□□ 0.31
COL5A1-205ENST00000464187 RHBDL3P58872 404 aa17.02■□□□□ 0.31
COL5A1-205ENST00000464187 PPARAQ07869 468 aa17.02■□□□□ 0.31
COL5A1-205ENST00000464187 SCRN1Q12765 414 aa17.02■□□□□ 0.31
COL5A1-205ENST00000464187 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.31
COL5A1-205ENST00000464187 CTR9Q6PD62 1173 aa17.02■□□□□ 0.31
COL5A1-205ENST00000464187 RALYLQ86SE5 291 aaKnown RBP17.02■□□□□ 0.31
COL5A1-205ENST00000464187 TEKT1Q969V4 418 aa17.02■□□□□ 0.31
COL5A1-205ENST00000464187 USP17L12C9JPN9 530 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 USP17L21D6R901 530 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 RAD17O75943 681 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 FGD1P98174 961 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 APOBRQ0VD83 1088 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 HHIPL2Q6UWX4 724 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 FERMT3Q86UX7 667 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 TGFBRAP1Q8WUH2 860 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 MKRN1Q9UHC7 482 aaKnown RBP17.01■□□□□ 0.31
COL5A1-205ENST00000464187 ZNRF3Q9ULT6 936 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 MYH2Q9UKX2 1941 aa17.01■□□□□ 0.31
COL5A1-205ENST00000464187 CCDC183Q5T5S1 534 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 CHST3Q7LGC8 479 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 MB21D2Q8IYB1 491 aaPredicted RBP17■□□□□ 0.31
COL5A1-205ENST00000464187 SMARCC2Q8TAQ2 1214 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 STAG1Q8WVM7 1258 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 JDP2Q8WYK2 163 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 INCENPQ9NQS7 918 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 ANAPC4Q9UJX5 808 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 NEDD4P46934 1319 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 CYP2D7A0A087X1C5 515 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 SMIM22K7EJ46 135 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms