RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 NME2P22392 152 aa8.84□□□□□ -0.99
SSR3-203ENST00000464138 LRRC14Q15048 493 aa8.84□□□□□ -0.99
SSR3-203ENST00000464138 SCARA3Q6AZY7 606 aa8.84□□□□□ -0.99
SSR3-203ENST00000464138 MAP4K3Q8IVH8 894 aa8.84□□□□□ -0.99
SSR3-203ENST00000464138 DCAF11Q8TEB1 546 aa8.84□□□□□ -0.99
SSR3-203ENST00000464138 SREK1Q8WXA9 508 aaKnown RBP8.84□□□□□ -0.99
SSR3-203ENST00000464138 CAPN10Q9HC96 672 aa8.84□□□□□ -0.99
SSR3-203ENST00000464138 OSGEPQ9NPF4 335 aa8.84□□□□□ -0.99
SSR3-203ENST00000464138 CYP8B1Q9UNU6 501 aa8.84□□□□□ -0.99
SSR3-203ENST00000464138 ABCC1P33527 1531 aa8.84□□□□□ -0.99
SSR3-203ENST00000464138 MYO3AQ8NEV4 1616 aa8.83□□□□□ -1
SSR3-203ENST00000464138 SOX1O00570 391 aaPredicted RBP8.83□□□□□ -1
SSR3-203ENST00000464138 BAG6P46379 1132 aa8.83□□□□□ -1
SSR3-203ENST00000464138 AP3B2Q13367 1082 aa8.83□□□□□ -1
SSR3-203ENST00000464138 MAP3K11Q16584 847 aa8.83□□□□□ -1
SSR3-203ENST00000464138 PCNX4Q63HM2 1172 aa8.83□□□□□ -1
SSR3-203ENST00000464138 AGMOQ6ZNB7 445 aa8.83□□□□□ -1
SSR3-203ENST00000464138 VPS37DQ86XT2 251 aa8.83□□□□□ -1
SSR3-203ENST00000464138 PHC3Q8NDX5 983 aa8.83□□□□□ -1
SSR3-203ENST00000464138 SPATA32Q96LK8 384 aa8.83□□□□□ -1
SSR3-203ENST00000464138 TRIM56Q9BRZ2 755 aaKnown RBP8.83□□□□□ -1
SSR3-203ENST00000464138 TINF2Q9BSI4 451 aa8.83□□□□□ -1
SSR3-203ENST00000464138 CEP170BQ9Y4F5 1589 aaPredicted RBP8.82□□□□□ -1
SSR3-203ENST00000464138 MINDY4BA8MYZ0 360 aa8.82□□□□□ -1
SSR3-203ENST00000464138 SHISA8B8ZZ34 492 aa8.82□□□□□ -1
SSR3-203ENST00000464138 TOM1O60784 492 aa8.82□□□□□ -1
SSR3-203ENST00000464138 HSPA1LP34931 641 aa8.82□□□□□ -1
SSR3-203ENST00000464138 EIF4A3P38919 411 aaKnown RBP8.82□□□□□ -1
SSR3-203ENST00000464138 ZNF157P51786 506 aaPredicted RBP8.82□□□□□ -1
SSR3-203ENST00000464138 C19orf57Q0VDD7 668 aa8.82□□□□□ -1
SSR3-203ENST00000464138 LYPD4Q6UWN0 246 aa8.82□□□□□ -1
SSR3-203ENST00000464138 KIAA0825Q8IV33 1275 aa8.82□□□□□ -1
SSR3-203ENST00000464138 SULF2Q8IWU5 870 aa8.82□□□□□ -1
SSR3-203ENST00000464138 RHOVQ96L33 236 aa8.82□□□□□ -1
SSR3-203ENST00000464138 SPON2Q9BUD6 331 aa8.82□□□□□ -1
SSR3-203ENST00000464138 CLTCQ00610 1675 aaKnown RBP8.81□□□□□ -1
SSR3-203ENST00000464138 CPS1P31327 1500 aa8.81□□□□□ -1
SSR3-203ENST00000464138 LRRIQ1Q96JM4 1722 aa8.81□□□□□ -1
SSR3-203ENST00000464138 PAGE1O75459 146 aa8.81□□□□□ -1
SSR3-203ENST00000464138 CYP11A1P05108 521 aa8.81□□□□□ -1
SSR3-203ENST00000464138 ARNTP27540 789 aa8.81□□□□□ -1
SSR3-203ENST00000464138 GJA8P48165 433 aa8.81□□□□□ -1
SSR3-203ENST00000464138 HNRNPUQ00839 825 aaKnown RBP eCLIP8.81□□□□□ -1
SSR3-203ENST00000464138 LMNB2Q03252 620 aa8.81□□□□□ -1
SSR3-203ENST00000464138 TREML4Q6UXN2 200 aa8.81□□□□□ -1
SSR3-203ENST00000464138 CCDC84Q86UT8 332 aaPredicted RBP8.81□□□□□ -1
SSR3-203ENST00000464138 KLHL23Q8NBE8 558 aa8.81□□□□□ -1
SSR3-203ENST00000464138 KCNQ5Q9NR82 932 aa8.81□□□□□ -1
SSR3-203ENST00000464138 LINC01387J3KSC0 135 aa8.8□□□□□ -1
SSR3-203ENST00000464138 CAMK2GQ13555 558 aaPredicted RBP8.8□□□□□ -1
SSR3-203ENST00000464138 DTWD1Q8N5C7 304 aa8.8□□□□□ -1
SSR3-203ENST00000464138 NEDD1Q8NHV4 660 aa8.8□□□□□ -1
SSR3-203ENST00000464138 SLC7A3Q8WY07 619 aa8.8□□□□□ -1
SSR3-203ENST00000464138 ZNF775Q96BV0 537 aaPredicted RBP8.8□□□□□ -1
SSR3-203ENST00000464138 DRC1Q96MC2 740 aa8.8□□□□□ -1
SSR3-203ENST00000464138 MIR1-1HGQ9H1L0 117 aa8.8□□□□□ -1
SSR3-203ENST00000464138 SUPT16HQ9Y5B9 1047 aaKnown RBP8.8□□□□□ -1
SSR3-203ENST00000464138 POLR1AO95602 1720 aaPredicted RBP8.8□□□□□ -1
SSR3-203ENST00000464138 CDC42BPAQ5VT25 1732 aa8.8□□□□□ -1
SSR3-203ENST00000464138 PTPRKQ15262 1439 aa8.8□□□□□ -1
SSR3-203ENST00000464138 SAMD9LQ8IVG5 1584 aa8.79□□□□□ -1
SSR3-203ENST00000464138 PIK3R2O00459 728 aa8.79□□□□□ -1
SSR3-203ENST00000464138 FSCN2O14926 492 aa8.79□□□□□ -1
SSR3-203ENST00000464138 PF4P02776 101 aa8.79□□□□□ -1
SSR3-203ENST00000464138 NID1P14543 1247 aa8.79□□□□□ -1
SSR3-203ENST00000464138 BMP6P22004 513 aa8.79□□□□□ -1
SSR3-203ENST00000464138 CDC25BP30305 580 aa8.79□□□□□ -1
SSR3-203ENST00000464138 DGKGP49619 791 aa8.79□□□□□ -1
SSR3-203ENST00000464138 GSTM4Q03013 218 aa8.79□□□□□ -1
SSR3-203ENST00000464138 SNAP47Q5SQN1 464 aa8.79□□□□□ -1
SSR3-203ENST00000464138 LLGL2Q6P1M3 1020 aa8.79□□□□□ -1
SSR3-203ENST00000464138 C8orf86Q6ZUL3 223 aa8.79□□□□□ -1
SSR3-203ENST00000464138 TRIM42Q8IWZ5 723 aa8.79□□□□□ -1
SSR3-203ENST00000464138 ZNF296Q8WUU4 475 aaPredicted RBP8.79□□□□□ -1
SSR3-203ENST00000464138 GPRASP2Q96D09 838 aa8.79□□□□□ -1
SSR3-203ENST00000464138 ADAMTS1Q9UHI8 967 aa8.79□□□□□ -1
SSR3-203ENST00000464138 TLR6Q9Y2C9 796 aa8.79□□□□□ -1
SSR3-203ENST00000464138 A2ML1A8K2U0 1454 aa8.78□□□□□ -1
SSR3-203ENST00000464138 ROBO2Q9HCK4 1378 aa8.78□□□□□ -1
SSR3-203ENST00000464138 F6X3S4 739 aa8.78□□□□□ -1
SSR3-203ENST00000464138 TFE3P19532 575 aaPredicted RBP8.78□□□□□ -1
SSR3-203ENST00000464138 TNNI2P48788 182 aa8.78□□□□□ -1
SSR3-203ENST00000464138 PAK2Q13177 524 aa8.78□□□□□ -1
SSR3-203ENST00000464138 HP1BP3Q5SSJ5 553 aaPredicted RBP8.78□□□□□ -1
SSR3-203ENST00000464138 LCE2CQ5TA81 110 aa8.78□□□□□ -1
SSR3-203ENST00000464138 SVOPQ8N4V2 548 aa8.78□□□□□ -1
SSR3-203ENST00000464138 RASGRP4Q8TDF6 673 aa8.78□□□□□ -1
SSR3-203ENST00000464138 GMLQ99445 158 aa8.78□□□□□ -1
SSR3-203ENST00000464138 RRAGCQ9HB90 399 aa8.78□□□□□ -1
SSR3-203ENST00000464138 CBX8Q9HC52 389 aa8.78□□□□□ -1
SSR3-203ENST00000464138 USP35Q9P2H5 1018 aa8.78□□□□□ -1
SSR3-203ENST00000464138 DNMT1P26358 1616 aaKnown RBP8.78□□□□□ -1
SSR3-203ENST00000464138 PLXNC1O60486 1568 aa8.78□□□□□ -1
SSR3-203ENST00000464138 ARHGAP35Q9NRY4 1499 aa8.77□□□□□ -1
SSR3-203ENST00000464138 SHANK2Q9UPX8 1470 aa8.77□□□□□ -1
SSR3-203ENST00000464138 ARID5AQ03989 594 aa8.77□□□□□ -1.01
SSR3-203ENST00000464138 SUZ12Q15022 739 aaKnown RBP8.77□□□□□ -1.01
SSR3-203ENST00000464138 ZNF385CQ66K41 422 aaPredicted RBP8.77□□□□□ -1.01
SSR3-203ENST00000464138 TXNDC11Q6PKC3 985 aa8.77□□□□□ -1.01
SSR3-203ENST00000464138 CORO1BQ9BR76 489 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms