RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 TAF1CQ15572 869 aaPredicted RBP25.28■■□□□ 1.64
PDLIM4-205ENST00000463615 PI16Q6UXB8 463 aa25.28■■□□□ 1.64
PDLIM4-205ENST00000463615 SH3BP5LQ7L8J4 393 aa25.28■■□□□ 1.64
PDLIM4-205ENST00000463615 C1orf115Q9H7X2 142 aa25.28■■□□□ 1.64
PDLIM4-205ENST00000463615 PHF20L1A8MW92 1017 aa25.27■■□□□ 1.64
PDLIM4-205ENST00000463615 DDX4Q9NQI0 724 aaKnown RBP25.27■■□□□ 1.64
PDLIM4-205ENST00000463615 TRIM17Q9Y577 477 aa25.27■■□□□ 1.64
PDLIM4-205ENST00000463615 DOCK2Q92608 1830 aa25.26■■□□□ 1.63
PDLIM4-205ENST00000463615 MS4A1P11836 297 aa25.26■■□□□ 1.63
PDLIM4-205ENST00000463615 CEP85Q6P2H3 762 aa25.26■■□□□ 1.63
PDLIM4-205ENST00000463615 TBC1D9Q6ZT07 1266 aa25.26■■□□□ 1.63
PDLIM4-205ENST00000463615 COL2A1P02458 1487 aaPredicted RBP25.26■■□□□ 1.63
PDLIM4-205ENST00000463615 AK9Q5TCS8 1911 aa25.25■■□□□ 1.63
PDLIM4-205ENST00000463615 BTBD19C9JJ37 291 aa25.25■■□□□ 1.63
PDLIM4-205ENST00000463615 OS9Q13438 667 aaPredicted RBP25.25■■□□□ 1.63
PDLIM4-205ENST00000463615 CCDC158Q5M9N0 1113 aa25.25■■□□□ 1.63
PDLIM4-205ENST00000463615 DBNDD2Q9BQY9 259 aa25.25■■□□□ 1.63
PDLIM4-205ENST00000463615 DDTLA6NHG4 134 aaPredicted RBP25.24■■□□□ 1.63
PDLIM4-205ENST00000463615 TLR2O60603 784 aa25.24■■□□□ 1.63
PDLIM4-205ENST00000463615 SOX10P56693 466 aa25.24■■□□□ 1.63
PDLIM4-205ENST00000463615 CD99L2Q8TCZ2 262 aa25.24■■□□□ 1.63
PDLIM4-205ENST00000463615 TBC1D12O60347 775 aa25.23■■□□□ 1.63
PDLIM4-205ENST00000463615 ANKRD23Q86SG2 305 aa25.23■■□□□ 1.63
PDLIM4-205ENST00000463615 EFCC1Q9HA90 598 aa25.23■■□□□ 1.63
PDLIM4-205ENST00000463615 RAI14Q9P0K7 980 aa25.23■■□□□ 1.63
PDLIM4-205ENST00000463615 PTPN22Q9Y2R2 807 aa25.23■■□□□ 1.63
PDLIM4-205ENST00000463615 CXCL11O14625 94 aa25.22■■□□□ 1.63
PDLIM4-205ENST00000463615 CAP1Q01518 475 aa25.22■■□□□ 1.63
PDLIM4-205ENST00000463615 MOGSQ13724 837 aa25.22■■□□□ 1.63
PDLIM4-205ENST00000463615 ARHGEF6Q15052 776 aa25.22■■□□□ 1.63
PDLIM4-205ENST00000463615 TTC39AQ5SRH9 613 aa25.22■■□□□ 1.63
PDLIM4-205ENST00000463615 SCYL3Q8IZE3 742 aa25.22■■□□□ 1.63
PDLIM4-205ENST00000463615 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.22■■□□□ 1.63
PDLIM4-205ENST00000463615 PANK1Q8TE04 598 aa25.22■■□□□ 1.63
PDLIM4-205ENST00000463615 LRP2BPQ9P2M1 347 aa25.22■■□□□ 1.63
PDLIM4-205ENST00000463615 DBNLQ9UJU6 430 aaKnown RBP25.22■■□□□ 1.63
PDLIM4-205ENST00000463615 ZSCAN29Q8IWY8 852 aaPredicted RBP25.21■■□□□ 1.63
PDLIM4-205ENST00000463615 CTNND1O60716 968 aaKnown RBP25.2■■□□□ 1.62
PDLIM4-205ENST00000463615 EAF2Q96CJ1 260 aaPredicted RBP25.2■■□□□ 1.62
PDLIM4-205ENST00000463615 MAST2Q6P0Q8 1798 aa25.19■■□□□ 1.62
PDLIM4-205ENST00000463615 CYP2E1P05181 493 aaPredicted RBP25.19■■□□□ 1.62
PDLIM4-205ENST00000463615 PTPRAP18433 802 aa25.19■■□□□ 1.62
PDLIM4-205ENST00000463615 PPP4CP60510 307 aa25.19■■□□□ 1.62
PDLIM4-205ENST00000463615 PICALMQ13492 652 aa25.19■■□□□ 1.62
PDLIM4-205ENST00000463615 ERC1Q8IUD2 1116 aa25.19■■□□□ 1.62
PDLIM4-205ENST00000463615 ARMC5Q96C12 935 aa25.18■■□□□ 1.62
PDLIM4-205ENST00000463615 OSBPL5Q9H0X9 879 aaPredicted RBP25.18■■□□□ 1.62
PDLIM4-205ENST00000463615 PICK1Q9NRD5 415 aa25.18■■□□□ 1.62
PDLIM4-205ENST00000463615 SNRKQ9NRH2 765 aa25.18■■□□□ 1.62
PDLIM4-205ENST00000463615 HTTP42858 3142 aa25.17■■□□□ 1.62
PDLIM4-205ENST00000463615 ADGRA2Q96PE1 1338 aa25.17■■□□□ 1.62
PDLIM4-205ENST00000463615 NAA16Q6N069 864 aaPredicted RBP25.17■■□□□ 1.62
PDLIM4-205ENST00000463615 C17orf99Q6UX52 265 aa25.17■■□□□ 1.62
PDLIM4-205ENST00000463615 AFG3L2Q9Y4W6 797 aa25.17■■□□□ 1.62
PDLIM4-205ENST00000463615 A0A0G2JLL6 359 aaPredicted RBP25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 PDHXO00330 501 aa25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 BAG3O95817 575 aa25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 GNRH1P01148 92 aa25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 PLCG2P16885 1265 aa25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 LACTBP83111 547 aaPredicted RBP25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 HSP90AB4PQ58FF6 505 aa25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 PRRT2Q7Z6L0 340 aaPredicted RBP25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 RPAP2Q8IXW5 612 aaPredicted RBP25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 TLR7Q9NYK1 1049 aaKnown RBP25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 DDX19BQ9UMR2 479 aa25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 ZHX2Q9Y6X8 837 aa25.16■■□□□ 1.62
PDLIM4-205ENST00000463615 ZAP70P43403 619 aa25.15■■□□□ 1.62
PDLIM4-205ENST00000463615 GPAT2Q6NUI2 795 aa25.15■■□□□ 1.62
PDLIM4-205ENST00000463615 TMED8Q6PL24 325 aaPredicted RBP25.15■■□□□ 1.62
PDLIM4-205ENST00000463615 TEX11Q8IYF3 940 aa25.15■■□□□ 1.62
PDLIM4-205ENST00000463615 CCDC8Q9H0W5 538 aaPredicted RBP25.15■■□□□ 1.62
PDLIM4-205ENST00000463615 ZBTB40Q9NUA8 1239 aa25.15■■□□□ 1.62
PDLIM4-205ENST00000463615 DOCK1Q14185 1865 aa25.15■■□□□ 1.62
PDLIM4-205ENST00000463615 FASTKD5Q7L8L6 764 aaKnown RBP25.14■■□□□ 1.62
PDLIM4-205ENST00000463615 SH3RF3Q8TEJ3 882 aaPredicted RBP25.14■■□□□ 1.62
PDLIM4-205ENST00000463615 NOL10Q9BSC4 688 aaKnown RBP25.14■■□□□ 1.62
PDLIM4-205ENST00000463615 DHX36Q9H2U1 1008 aaKnown RBP25.14■■□□□ 1.62
PDLIM4-205ENST00000463615 EXOC6BQ9Y2D4 811 aa25.14■■□□□ 1.62
PDLIM4-205ENST00000463615 SLC45A1Q9Y2W3 748 aa25.14■■□□□ 1.62
PDLIM4-205ENST00000463615 PDE4DIPQ5VU43 2346 aa25.13■■□□□ 1.61
PDLIM4-205ENST00000463615 SLURP2P0DP57 97 aa25.13■■□□□ 1.61
PDLIM4-205ENST00000463615 PIH1D3Q9NQM4 214 aaKnown RBP25.13■■□□□ 1.61
PDLIM4-205ENST00000463615 HERC5Q9UII4 1024 aaKnown RBP25.13■■□□□ 1.61
PDLIM4-205ENST00000463615 PHIPQ8WWQ0 1821 aa25.12■■□□□ 1.61
PDLIM4-205ENST00000463615 PRMT2P55345 433 aa25.12■■□□□ 1.61
PDLIM4-205ENST00000463615 KIF22Q14807 665 aa25.12■■□□□ 1.61
PDLIM4-205ENST00000463615 ADGRA1Q86SQ6 560 aa25.12■■□□□ 1.61
PDLIM4-205ENST00000463615 METTL16Q86W50 562 aaKnown RBP25.12■■□□□ 1.61
PDLIM4-205ENST00000463615 PARK7Q99497 189 aaKnown RBP25.12■■□□□ 1.61
PDLIM4-205ENST00000463615 CHMP4BQ9H444 224 aaKnown RBP25.12■■□□□ 1.61
PDLIM4-205ENST00000463615 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.12■■□□□ 1.61
PDLIM4-205ENST00000463615 AATFQ9NY61 560 aaKnown RBP eCLIP25.12■■□□□ 1.61
PDLIM4-205ENST00000463615 RCAN3Q9UKA8 241 aa25.12■■□□□ 1.61
PDLIM4-205ENST00000463615 RHPN1Q8TCX5 695 aa25.11■■□□□ 1.61
PDLIM4-205ENST00000463615 TBC1D2Q9BYX2 928 aa25.11■■□□□ 1.61
PDLIM4-205ENST00000463615 PI4KBQ9UBF8 816 aa25.11■■□□□ 1.61
PDLIM4-205ENST00000463615 TNRC18O15417 2968 aaPredicted RBP25.11■■□□□ 1.61
PDLIM4-205ENST00000463615 PTPRFP10586 1907 aa25.1■■□□□ 1.61
PDLIM4-205ENST00000463615 CERS3Q8IU89 383 aa25.1■■□□□ 1.61
PDLIM4-205ENST00000463615 RBBP6Q7Z6E9 1792 aaKnown RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms