RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 REV3LO60673 3130 aa17.24■□□□□ 0.35
C9orf3-211ENST00000463372 SMIM22K7EJ46 135 aa17.24■□□□□ 0.35
C9orf3-211ENST00000463372 IGFBP4P22692 258 aa17.24■□□□□ 0.35
C9orf3-211ENST00000463372 FKBP1CQ5VVH2 108 aa17.24■□□□□ 0.35
C9orf3-211ENST00000463372 C11orf16Q9NQ32 467 aa17.24■□□□□ 0.35
C9orf3-211ENST00000463372 PNMA3Q9UL41 463 aa17.24■□□□□ 0.35
C9orf3-211ENST00000463372 MAPK8IP3Q9UPT6 1336 aa17.23■□□□□ 0.35
C9orf3-211ENST00000463372 TAF5LO75529 589 aa17.23■□□□□ 0.35
C9orf3-211ENST00000463372 CCND3P30281 292 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-211ENST00000463372 FOXK2Q01167 660 aa17.23■□□□□ 0.35
C9orf3-211ENST00000463372 CACNB2Q08289 660 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-211ENST00000463372 TRMT44Q8IYL2 757 aaKnown RBP17.23■□□□□ 0.35
C9orf3-211ENST00000463372 ZHX2Q9Y6X8 837 aa17.23■□□□□ 0.35
C9orf3-211ENST00000463372 ZKSCAN1P17029 563 aaPredicted RBP17.22■□□□□ 0.35
C9orf3-211ENST00000463372 ITGA6P23229 1130 aa17.22■□□□□ 0.35
C9orf3-211ENST00000463372 NHLH1Q02575 133 aa17.22■□□□□ 0.35
C9orf3-211ENST00000463372 HOXB7P09629 217 aa17.21■□□□□ 0.35
C9orf3-211ENST00000463372 GCLCP48506 637 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-211ENST00000463372 KCNQ1P51787 676 aa17.21■□□□□ 0.35
C9orf3-211ENST00000463372 TEKT1Q969V4 418 aa17.21■□□□□ 0.35
C9orf3-211ENST00000463372 PLEKHF1Q96S99 279 aa17.21■□□□□ 0.35
C9orf3-211ENST00000463372 PICK1Q9NRD5 415 aa17.21■□□□□ 0.35
C9orf3-211ENST00000463372 TIMELESSQ9UNS1 1208 aa17.21■□□□□ 0.35
C9orf3-211ENST00000463372 WDFY4Q6ZS81 3184 aa17.21■□□□□ 0.35
C9orf3-211ENST00000463372 XRCC5P13010 732 aaKnown RBP17.2■□□□□ 0.34
C9orf3-211ENST00000463372 HDLBPQ00341 1268 aaKnown RBP17.2■□□□□ 0.34
C9orf3-211ENST00000463372 TFF2Q03403 129 aa17.2■□□□□ 0.34
C9orf3-211ENST00000463372 NUDT12Q9BQG2 462 aa17.2■□□□□ 0.34
C9orf3-211ENST00000463372 AGTPBP1Q9UPW5 1226 aa17.2■□□□□ 0.34
C9orf3-211ENST00000463372 SOCS4Q8WXH5 440 aa17.19■□□□□ 0.34
C9orf3-211ENST00000463372 METTL22Q9BUU2 404 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-211ENST00000463372 PNNQ9H307 717 aaKnown RBP17.19■□□□□ 0.34
C9orf3-211ENST00000463372 AFG3L2Q9Y4W6 797 aa17.19■□□□□ 0.34
C9orf3-211ENST00000463372 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
C9orf3-211ENST00000463372 CHD9Q3L8U1 2897 aa17.18■□□□□ 0.34
C9orf3-211ENST00000463372 DNM1LO00429 736 aa17.18■□□□□ 0.34
C9orf3-211ENST00000463372 ADGRE1Q14246 886 aa17.18■□□□□ 0.34
C9orf3-211ENST00000463372 PDLIM7Q9NR12 457 aa17.18■□□□□ 0.34
C9orf3-211ENST00000463372 PRR33A8MZF0 331 aa17.17■□□□□ 0.34
C9orf3-211ENST00000463372 PTPRAP18433 802 aa17.17■□□□□ 0.34
C9orf3-211ENST00000463372 CCDC129Q6ZRS4 1044 aa17.17■□□□□ 0.34
C9orf3-211ENST00000463372 SCYL3Q8IZE3 742 aa17.17■□□□□ 0.34
C9orf3-211ENST00000463372 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
C9orf3-211ENST00000463372 CFAP54Q96N23 3096 aa17.16■□□□□ 0.34
C9orf3-211ENST00000463372 TRIM75PA6NK02 468 aa17.16■□□□□ 0.34
C9orf3-211ENST00000463372 RIPK4P57078 832 aa17.16■□□□□ 0.34
C9orf3-211ENST00000463372 SLC39A5Q6ZMH5 540 aa17.16■□□□□ 0.34
C9orf3-211ENST00000463372 TDRD7Q8NHU6 1098 aaKnown RBP17.16■□□□□ 0.34
C9orf3-211ENST00000463372 FAM151AQ8WW52 585 aa17.16■□□□□ 0.34
C9orf3-211ENST00000463372 ZDHHC15Q96MV8 337 aa17.16■□□□□ 0.34
C9orf3-211ENST00000463372 LRRC37A2A6NM11 1700 aa17.16■□□□□ 0.34
C9orf3-211ENST00000463372 TRIM43BA6NCK2 446 aa17.15■□□□□ 0.34
C9orf3-211ENST00000463372 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
C9orf3-211ENST00000463372 SKIV2LQ15477 1246 aaKnown RBP17.15■□□□□ 0.34
C9orf3-211ENST00000463372 TRIM60Q495X7 471 aa17.15■□□□□ 0.34
C9orf3-211ENST00000463372 SH3RF1Q7Z6J0 888 aa17.15■□□□□ 0.34
C9orf3-211ENST00000463372 LPAR1Q92633 364 aa17.15■□□□□ 0.34
C9orf3-211ENST00000463372 TRIM43Q96BQ3 446 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-211ENST00000463372 UIMC1Q96RL1 719 aa17.15■□□□□ 0.34
C9orf3-211ENST00000463372 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
C9orf3-211ENST00000463372 DOCK1Q14185 1865 aa17.15■□□□□ 0.34
C9orf3-211ENST00000463372 PI4K2BG5E9Z4 385 aa17.14■□□□□ 0.33
C9orf3-211ENST00000463372 MSCO60682 206 aa17.14■□□□□ 0.33
C9orf3-211ENST00000463372 DDX58O95786 925 aaKnown RBP17.14■□□□□ 0.33
C9orf3-211ENST00000463372 EPHB4P54760 987 aa17.14■□□□□ 0.33
C9orf3-211ENST00000463372 LMOD3Q0VAK6 560 aa17.14■□□□□ 0.33
C9orf3-211ENST00000463372 TREML2Q5T2D2 321 aa17.14■□□□□ 0.33
C9orf3-211ENST00000463372 MICALL1Q8N3F8 863 aa17.14■□□□□ 0.33
C9orf3-211ENST00000463372 DOCK2Q92608 1830 aa17.14■□□□□ 0.33
C9orf3-211ENST00000463372 SPTBN4Q9H254 2564 aa17.13■□□□□ 0.33
C9orf3-211ENST00000463372 ANKRD18BA2A2Z9 1011 aa17.13■□□□□ 0.33
C9orf3-211ENST00000463372 CHL1O00533 1208 aa17.13■□□□□ 0.33
C9orf3-211ENST00000463372 FPGSQ05932 587 aa17.13■□□□□ 0.33
C9orf3-211ENST00000463372 TCP10Q12799 353 aa17.13■□□□□ 0.33
C9orf3-211ENST00000463372 PABPC4Q13310 644 aaKnown RBP eCLIP17.13■□□□□ 0.33
C9orf3-211ENST00000463372 APOBEC3HQ6NTF7 200 aaKnown RBP17.13■□□□□ 0.33
C9orf3-211ENST00000463372 KHSRPQ92945 711 aaKnown RBP eCLIP17.13■□□□□ 0.332e-6■■■□□ 16
C9orf3-211ENST00000463372 PBX4Q9BYU1 374 aa17.13■□□□□ 0.33
C9orf3-211ENST00000463372 KCNH6Q9H252 994 aa17.13■□□□□ 0.33
C9orf3-211ENST00000463372 CHD7Q9P2D1 2997 aa17.13■□□□□ 0.33
C9orf3-211ENST00000463372 DDX20Q9UHI6 824 aaKnown RBP17.13■□□□□ 0.33
C9orf3-211ENST00000463372 PLIN1O60240 522 aa17.12■□□□□ 0.33
C9orf3-211ENST00000463372 ST18O60284 1047 aa17.12■□□□□ 0.33
C9orf3-211ENST00000463372 CNGA1P29973 690 aa17.12■□□□□ 0.33
C9orf3-211ENST00000463372 HIBADHP31937 336 aaKnown RBP17.12■□□□□ 0.33
C9orf3-211ENST00000463372 RGS2P41220 211 aa17.12■□□□□ 0.33
C9orf3-211ENST00000463372 GRIK5Q16478 980 aa17.12■□□□□ 0.33
C9orf3-211ENST00000463372 CCL14Q16627 93 aa17.12■□□□□ 0.33
C9orf3-211ENST00000463372 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
C9orf3-211ENST00000463372 FBXL18Q96ME1 805 aa17.12■□□□□ 0.33
C9orf3-211ENST00000463372 KBTBD13C9JR72 458 aa17.11■□□□□ 0.33
C9orf3-211ENST00000463372 ERC2O15083 957 aa17.11■□□□□ 0.33
C9orf3-211ENST00000463372 PBX2P40425 430 aa17.11■□□□□ 0.33
C9orf3-211ENST00000463372 DUSP27Q5VZP5 1158 aa17.11■□□□□ 0.33
C9orf3-211ENST00000463372 PROCA1Q8NCQ7 364 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-211ENST00000463372 TBC1D22AQ8WUA7 517 aa17.11■□□□□ 0.33
C9orf3-211ENST00000463372 MRIQ9BWK5 157 aa17.11■□□□□ 0.33
C9orf3-211ENST00000463372 MAP3K2Q9Y2U5 619 aa17.11■□□□□ 0.33
C9orf3-211ENST00000463372 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
C9orf3-211ENST00000463372 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms