RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 ZFPM1Q8IX07 1006 aa8.94□□□□□ -0.98
PTPRF-210ENST00000463041 PANK1Q8TE04 598 aa8.94□□□□□ -0.98
PTPRF-210ENST00000463041 CHMP4BQ9H444 224 aaKnown RBP8.94□□□□□ -0.98
PTPRF-210ENST00000463041 C1orf115Q9H7X2 142 aa8.94□□□□□ -0.98
PTPRF-210ENST00000463041 RAI14Q9P0K7 980 aa8.94□□□□□ -0.98
PTPRF-210ENST00000463041 HPS5Q9UPZ3 1129 aa8.94□□□□□ -0.98
PTPRF-210ENST00000463041 MROH7-TTC4A0A0A0MT08 1334 aa8.94□□□□□ -0.98
PTPRF-210ENST00000463041 KIAA0100Q14667 2235 aaKnown RBP8.94□□□□□ -0.98
PTPRF-210ENST00000463041 PDE4DIPQ5VU43 2346 aa8.94□□□□□ -0.98
PTPRF-210ENST00000463041 PHF20L1A8MW92 1017 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 CXCL11O14625 94 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 TBC1D12O60347 775 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 BAG3O95817 575 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 RHBDL3P58872 404 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 PPP4CP60510 307 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 TAF1CQ15572 869 aaPredicted RBP8.93□□□□□ -0.98
PTPRF-210ENST00000463041 CEP85Q6P2H3 762 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 ERC1Q8IUD2 1116 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 RPAP2Q8IXW5 612 aaPredicted RBP8.93□□□□□ -0.98
PTPRF-210ENST00000463041 FAM43AQ8N2R8 423 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 ZNF384Q8TF68 577 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 DBNDD2Q9BQY9 259 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 NOL10Q9BSC4 688 aaKnown RBP8.93□□□□□ -0.98
PTPRF-210ENST00000463041 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 TRIM17Q9Y577 477 aa8.93□□□□□ -0.98
PTPRF-210ENST00000463041 DDTLA6NHG4 134 aaPredicted RBP8.92□□□□□ -0.98
PTPRF-210ENST00000463041 BTBD19C9JJ37 291 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 TLR2O60603 784 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 CTNND1O60716 968 aaKnown RBP8.92□□□□□ -0.98
PTPRF-210ENST00000463041 PLCG2P16885 1265 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 NAA16Q6N069 864 aaPredicted RBP8.92□□□□□ -0.98
PTPRF-210ENST00000463041 PI16Q6UXB8 463 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 SH3BP5LQ7L8J4 393 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 OTOP1Q7RTM1 612 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 EAF2Q96CJ1 260 aaPredicted RBP8.92□□□□□ -0.98
PTPRF-210ENST00000463041 CCDC8Q9H0W5 538 aaPredicted RBP8.92□□□□□ -0.98
PTPRF-210ENST00000463041 EFCC1Q9HA90 598 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 DDX4Q9NQI0 724 aaKnown RBP8.92□□□□□ -0.98
PTPRF-210ENST00000463041 PICK1Q9NRD5 415 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 SNRKQ9NRH2 765 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 RCAN3Q9UKA8 241 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 DDX19BQ9UMR2 479 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 CENPFP49454 3210 aa8.92□□□□□ -0.98
PTPRF-210ENST00000463041 MYO5AQ9Y4I1 1855 aaKnown RBP8.91□□□□□ -0.98
PTPRF-210ENST00000463041 HMMRO75330 724 aa8.91□□□□□ -0.98
PTPRF-210ENST00000463041 CYP2E1P05181 493 aaPredicted RBP8.91□□□□□ -0.98
PTPRF-210ENST00000463041 ZAP70P43403 619 aa8.91□□□□□ -0.98
PTPRF-210ENST00000463041 PICALMQ13492 652 aa8.91□□□□□ -0.98
PTPRF-210ENST00000463041 TMED8Q6PL24 325 aaPredicted RBP8.91□□□□□ -0.98
PTPRF-210ENST00000463041 FASTKD5Q7L8L6 764 aaKnown RBP8.91□□□□□ -0.98
PTPRF-210ENST00000463041 ANKRD23Q86SG2 305 aa8.91□□□□□ -0.98
PTPRF-210ENST00000463041 TEX11Q8IYF3 940 aa8.91□□□□□ -0.98
PTPRF-210ENST00000463041 SCYL3Q8IZE3 742 aa8.91□□□□□ -0.98
PTPRF-210ENST00000463041 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.91□□□□□ -0.98
PTPRF-210ENST00000463041 CD99L2Q8TCZ2 262 aa8.91□□□□□ -0.98
PTPRF-210ENST00000463041 ZBTB40Q9NUA8 1239 aa8.91□□□□□ -0.98
PTPRF-210ENST00000463041 DBNLQ9UJU6 430 aaKnown RBP8.91□□□□□ -0.98
PTPRF-210ENST00000463041 PTPN22Q9Y2R2 807 aa8.91□□□□□ -0.98
PTPRF-210ENST00000463041 TNRC18O15417 2968 aaPredicted RBP8.91□□□□□ -0.98
PTPRF-210ENST00000463041 RFX7Q2KHR2 1363 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 ATRNL1Q5VV63 1379 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 RAB11FIP3O75154 756 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 GNRH1P01148 92 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 PTPRAP18433 802 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 PDE3AQ14432 1141 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 KIF22Q14807 665 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 FOXP4Q8IVH2 680 aaPredicted RBP8.9□□□□□ -0.98
PTPRF-210ENST00000463041 OSBPL5Q9H0X9 879 aaPredicted RBP8.9□□□□□ -0.98
PTPRF-210ENST00000463041 DHX36Q9H2U1 1008 aaKnown RBP8.9□□□□□ -0.98
PTPRF-210ENST00000463041 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.9□□□□□ -0.98
PTPRF-210ENST00000463041 PI4KBQ9UBF8 816 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 EXOC6BQ9Y2D4 811 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 COG6Q9Y2V7 657 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 AFG3L2Q9Y4W6 797 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 ZHX2Q9Y6X8 837 aa8.9□□□□□ -0.98
PTPRF-210ENST00000463041 DOCK2Q92608 1830 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 PDHXO00330 501 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 SOX10P56693 466 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 MOGSQ13724 837 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 C17orf99Q6UX52 265 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 NBPF11Q86T75 865 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 AACSQ86V21 672 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 CERS3Q8IU89 383 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 CLASRPQ8N2M8 674 aaKnown RBP8.89□□□□□ -0.99
PTPRF-210ENST00000463041 RHPN1Q8TCX5 695 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 SH3RF3Q8TEJ3 882 aaPredicted RBP8.89□□□□□ -0.99
PTPRF-210ENST00000463041 KIF1BPQ96EK5 621 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 AATFQ9NY61 560 aaKnown RBP eCLIP8.89□□□□□ -0.99
PTPRF-210ENST00000463041 HERC5Q9UII4 1024 aaKnown RBP8.89□□□□□ -0.99
PTPRF-210ENST00000463041 HTTP42858 3142 aa8.89□□□□□ -0.99
PTPRF-210ENST00000463041 DOCK3Q8IZD9 2030 aa8.88□□□□□ -0.99
PTPRF-210ENST00000463041 A0A0G2JLL6 359 aaPredicted RBP8.88□□□□□ -0.99
PTPRF-210ENST00000463041 CYP7A1P22680 504 aa8.88□□□□□ -0.99
PTPRF-210ENST00000463041 HOXD10P28358 340 aa8.88□□□□□ -0.99
PTPRF-210ENST00000463041 PRMT2P55345 433 aa8.88□□□□□ -0.99
PTPRF-210ENST00000463041 LACTBP83111 547 aaPredicted RBP8.88□□□□□ -0.99
PTPRF-210ENST00000463041 MAP3K12Q12852 859 aa8.88□□□□□ -0.99
PTPRF-210ENST00000463041 TTF1Q15361 905 aaPredicted RBP8.88□□□□□ -0.99
PTPRF-210ENST00000463041 GPAT2Q6NUI2 795 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms